Gene annotation
Transcriptome id Sobic.004G285000.1
Synonym MTA, Sb04g032100, EMB1706
Functional annotation MT-A70 domain containing protein, expressed
UniProt C5Y1A7
Pfam PF05063
Panther DB PTHR12829 PTHR12829:SF2
NCBI CDD -
KEGG Orthology K05925; mRNA m6A methyltransferase catalytic subunit
Gene Ontology GO:0008168; methyltransferase activity GO:0006139nucleobase-containing compound metabolic process


Orthologs (automatic annotation)
TAIR AT4G10760 : mRNAadenosine methylase
RAP-DB (Rice) LOC_Os02g45110.1 : MT-A70 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a021480
Brachypodium KQK00727 , KQK00728 , PNT69219
Barley HORVU6Hr1G064940.5 , HORVU6Hr1G064940.7 , HORVU6Hr1G064940.6 , HORVU6Hr1G064940.4 , HORVU6Hr1G064940.3 , HORVU6Hr1G064940.2 , HORVU6Hr1G064940.1 , HORVU6Hr1G064940.8
Wheat TraesCS6A02G254900 , TraesCS6D02G236200 , TraesCS6B02G270600
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.004G285000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G086200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)
2 Sobic.004G111000 bromodomain containing protein, expressed -
3 Sobic.001G346900 RNA cap guanine-N2 methyltransferase domain containing protein, expressed K14292: trimethylguanosine synthase
4 Sobic.003G427100 WD domain, G-beta repeat domain containing protein, expressed K15542: polyadenylation factor subunit 2
5 Sobic.009G151200 expressed protein -
6 Sobic.010G215900 type II intron maturase protein, putative, expressed -
7 Sobic.003G409200 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
8 Sobic.007G044100 DNA-directed RNA polymerase III subunit RPC1, putative, expressed K03006: RPB1, DNA-directed RNA polymerase II subunit RPB1
9 Sobic.001G013300 SWIM zinc finger family protein, putative, expressed -
10 Sobic.010G278600 FG-GAP repeat-containing protein, putative, expressed -
11 Sobic.006G226300 SDA1, putative, expressed K14856: SDA1, protein SDA1
12 Sobic.010G279900 PHD-finger domain containing protein, expressed -
13 Sobic.004G321700 mitochondrial transcription termination factor family protein, putative, expressed K15032: mTERF domain-containing protein, mitochondrial
14 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
15 Sobic.002G223300 nucleoporin p58/p45, putative, expressed K14307: NUPL1, nucleoporin p58/p45
16 Sobic.001G134300 - K17613: calcineurin-binding protein cabin-1
17 Sobic.004G309900 cold-induced protein, putative, expressed K13174: THO complex subunit 5
18 Sobic.001G246500 GTPase of unknown function domain containing protein, putative, expressed -
19 Sobic.002G079100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
20 Sobic.002G063900 zinc ion binding protein, putative, expressed -


Gene co-expression network
sample Sobic004G285000 Sobic004G285000 Sobic004G086200 Sobic004G086200 Sobic004G285000--Sobic004G086200 Sobic004G111000 Sobic004G111000 Sobic004G285000--Sobic004G111000 Sobic001G346900 Sobic001G346900 Sobic004G285000--Sobic001G346900 Sobic003G427100 Sobic003G427100 Sobic004G285000--Sobic003G427100 Sobic009G151200 Sobic009G151200 Sobic004G285000--Sobic009G151200 Sobic010G215900 Sobic010G215900 Sobic004G285000--Sobic010G215900 Sobic003G409200 Sobic003G409200 Sobic004G285000--Sobic003G409200 Sobic007G044100 Sobic007G044100 Sobic004G285000--Sobic007G044100 Sobic001G013300 Sobic001G013300 Sobic004G285000--Sobic001G013300 Sobic004G086200--Sobic001G346900 Sobic004G086200--Sobic004G285000 Sobic001G134300 Sobic001G134300 Sobic004G086200--Sobic001G134300 Sobic001G245900 Sobic001G245900 Sobic004G086200--Sobic001G245900 Sobic001G306900 Sobic001G306900 Sobic004G086200--Sobic001G306900 Sobic010G096000 Sobic010G096000 Sobic004G086200--Sobic010G096000 Sobic010G279900 Sobic010G279900 Sobic004G086200--Sobic010G279900 Sobic001G246500 Sobic001G246500 Sobic004G086200--Sobic001G246500 Sobic010G065300 Sobic010G065300 Sobic004G086200--Sobic010G065300 Sobic004G111000--Sobic004G285000 Sobic004G111000--Sobic003G409200 Sobic004G111000--Sobic010G215900 Sobic004G111000--Sobic007G044100 Sobic004G111000--Sobic010G279900 Sobic004G043750 Sobic004G043750 Sobic004G111000--Sobic004G043750 Sobic006G056000 Sobic006G056000 Sobic004G111000--Sobic006G056000 Sobic004G111000--Sobic004G086200 Sobic002G263700 Sobic002G263700 Sobic004G111000--Sobic002G263700 Sobic001G346900--Sobic004G086200 Sobic001G346900--Sobic003G409200 Sobic001G346900--Sobic001G134300 Sobic003G042400 Sobic003G042400 Sobic001G346900--Sobic003G042400 Sobic008G147200 Sobic008G147200 Sobic001G346900--Sobic008G147200 Sobic001G346900--Sobic004G285000 Sobic003G416700 Sobic003G416700 Sobic001G346900--Sobic003G416700 Sobic001G346900--Sobic010G096000 Sobic002G422100 Sobic002G422100 Sobic001G346900--Sobic002G422100 Sobic005G079800 Sobic005G079800 Sobic003G427100--Sobic005G079800 Sobic003G427100--Sobic007G044100 Sobic003G427100--Sobic003G409200 Sobic003G427100--Sobic004G285000 Sobic001G398800 Sobic001G398800 Sobic003G427100--Sobic001G398800 Sobic002G153700 Sobic002G153700 Sobic003G427100--Sobic002G153700 Sobic004G156500 Sobic004G156500 Sobic003G427100--Sobic004G156500 Sobic003G438900 Sobic003G438900 Sobic003G427100--Sobic003G438900 Sobic003G307000 Sobic003G307000 Sobic003G427100--Sobic003G307000 Sobic006G248500 Sobic006G248500 Sobic009G151200--Sobic006G248500 Sobic002G259800 Sobic002G259800 Sobic009G151200--Sobic002G259800 Sobic005G133500 Sobic005G133500 Sobic009G151200--Sobic005G133500 Sobic009G151200--Sobic004G285000 Sobic001G424600 Sobic001G424600 Sobic009G151200--Sobic001G424600 Sobic004G085300 Sobic004G085300 Sobic009G151200--Sobic004G085300 Sobic008G100100 Sobic008G100100 Sobic009G151200--Sobic008G100100 Sobic009G151200--Sobic004G086200 Sobic009G151200--Sobic004G156500 Sobic010G215900--Sobic003G409200 Sobic010G215900--Sobic004G285000 Sobic010G215900--Sobic004G111000 Sobic010G215900--Sobic001G346900 Sobic010G215900--Sobic001G013300 Sobic006G226300 Sobic006G226300 Sobic010G215900--Sobic006G226300 Sobic010G215900--Sobic008G147200 Sobic010G215900--Sobic003G042400 Sobic004G155600 Sobic004G155600 Sobic010G215900--Sobic004G155600 Sobic003G409200--Sobic001G346900 Sobic003G409200--Sobic010G215900 Sobic003G409200--Sobic004G111000 Sobic008G057000 Sobic008G057000 Sobic003G409200--Sobic008G057000 Sobic003G409200--Sobic003G427100 Sobic001G501800 Sobic001G501800 Sobic003G409200--Sobic001G501800 Sobic003G409200--Sobic004G285000 Sobic003G409200--Sobic010G279900 Sobic002G145800 Sobic002G145800 Sobic003G409200--Sobic002G145800 Sobic007G044100--Sobic003G427100 Sobic007G044100--Sobic004G285000 Sobic007G044100--Sobic004G111000 Sobic001G090800 Sobic001G090800 Sobic007G044100--Sobic001G090800 Sobic007G044100--Sobic003G307000 Sobic007G044100--Sobic001G134300 Sobic007G044100--Sobic003G409200 Sobic007G044100--Sobic010G279900 Sobic002G234600 Sobic002G234600 Sobic007G044100--Sobic002G234600 Sobic001G013300--Sobic004G285000 Sobic001G373000 Sobic001G373000 Sobic001G013300--Sobic001G373000 Sobic001G013300--Sobic008G147200 Sobic001G013300--Sobic001G346900 Sobic001G004100 Sobic001G004100 Sobic001G013300--Sobic001G004100 Sobic001G013300--Sobic010G215900 Sobic001G013300--Sobic003G409200 Sobic007G187600 Sobic007G187600 Sobic001G013300--Sobic007G187600 Sobic001G023800 Sobic001G023800 Sobic001G013300--Sobic001G023800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.