Gene annotation
Transcriptome id Sobic.001G346900.1
Synonym Sb01g033250
Functional annotation RNA cap guanine-N2 methyltransferase domain containing protein, expressed
UniProt A0A1B6QMQ0
Pfam PF02475 PF00397
Panther DB PTHR14741 PTHR14741:SF33
NCBI CDD KOG2730; Methylase
KEGG Orthology K14292; trimethylguanosine synthase
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G45231 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os03g27930.1 : RNA cap guanine-N2 methyltransferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a002767
Brachypodium PNT77279 , PNT77278 , PNT77282 , PNT77283 , PNT77280 , PNT77281 , KQK21383 , KQK21385 , KQK21384
Barley HORVU1Hr1G093790.17 , HORVU1Hr1G093790.16 , HORVU1Hr1G093790.15 , HORVU1Hr1G093790.14 , HORVU1Hr1G093790.13 , HORVU1Hr1G093790.12 , HORVU1Hr1G093790.11 , HORVU1Hr1G093790.10 , HORVU1Hr1G093790.18 , HORVU1Hr1G093790.9 , HORVU1Hr1G093790.8 , HORVU1Hr1G093790.7 , HORVU1Hr1G093790.6 , HORVU1Hr1G093790.5 , HORVU1Hr1G093790.4 , HORVU1Hr1G093790.3 , HORVU1Hr1G093790.2 , HORVU1Hr1G093790.1 , HORVU1Hr1G093790.19 , HORVU1Hr1G093790.39 , HORVU1Hr1G093790.38 , HORVU1Hr1G093790.31 , HORVU1Hr1G093790.30 , HORVU1Hr1G093790.33 , HORVU1Hr1G093790.35 , HORVU1Hr1G093790.37 , HORVU1Hr1G093790.36 , HORVU1Hr1G093790.28 , HORVU1Hr1G093790.29 , HORVU1Hr1G093790.26 , HORVU1Hr1G093790.27 , HORVU1Hr1G093790.24 , HORVU1Hr1G093790.25 , HORVU1Hr1G093790.22 , HORVU1Hr1G093790.23 , HORVU1Hr1G093790.20 , HORVU1Hr1G093790.21 , HORVU1Hr1G093790.40 , HORVU1Hr1G093790.32 , HORVU1Hr1G093790.34
Wheat TraesCS1A02G430700 , TraesCS1A02G430700 , TraesCS1A02G430700 , TraesCS1D02G439800 , TraesCS1A02G432300 , TraesCS1B02G465400 , TraesCS1B02G467900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G086200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)
2 Sobic.003G409200 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
3 Sobic.001G134300 - K17613: calcineurin-binding protein cabin-1
4 Sobic.003G042400 - K12598: MTR4, ATP-dependent RNA helicase DOB1
5 Sobic.008G147200 tubulin, putative, expressed -
6 Sobic.004G285000 MT-A70 domain containing protein, expressed K05925: mRNA m6A methyltransferase catalytic subunit
7 Sobic.003G416700 homeobox domain containing protein, expressed -
8 Sobic.010G096000 OsDegp10 - Putative Deg protease homologue, expressed -
9 Sobic.002G422100 EMB1011, putative, expressed K14317: NUP214, nuclear pore complex protein Nup214
10 Sobic.004G332400 neurochondrin family protein, putative, expressed -
11 Sobic.004G321700 mitochondrial transcription termination factor family protein, putative, expressed K15032: mTERF domain-containing protein, mitochondrial
12 Sobic.006G040800 expressed protein -
13 Sobic.002G063900 zinc ion binding protein, putative, expressed -
14 Sobic.006G226300 SDA1, putative, expressed K14856: SDA1, protein SDA1
15 Sobic.009G255600 cleavage and polyadenylation specificity factor, putative, expressed K10610: DNA damage-binding protein 1
16 Sobic.009G119000 tetratricopeptide repeat containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
17 Sobic.010G215900 type II intron maturase protein, putative, expressed -
18 Sobic.008G057000 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
19 Sobic.001G461400 pre-mRNA-processing factor 39, putative, expressed K13217: PRPF39, pre-mRNA-processing factor 39
20 Sobic.001G063700 expressed protein -


Gene co-expression network
sample Sobic001G346900 Sobic001G346900 Sobic004G086200 Sobic004G086200 Sobic001G346900--Sobic004G086200 Sobic003G409200 Sobic003G409200 Sobic001G346900--Sobic003G409200 Sobic001G134300 Sobic001G134300 Sobic001G346900--Sobic001G134300 Sobic003G042400 Sobic003G042400 Sobic001G346900--Sobic003G042400 Sobic008G147200 Sobic008G147200 Sobic001G346900--Sobic008G147200 Sobic004G285000 Sobic004G285000 Sobic001G346900--Sobic004G285000 Sobic003G416700 Sobic003G416700 Sobic001G346900--Sobic003G416700 Sobic010G096000 Sobic010G096000 Sobic001G346900--Sobic010G096000 Sobic002G422100 Sobic002G422100 Sobic001G346900--Sobic002G422100 Sobic004G086200--Sobic001G346900 Sobic004G086200--Sobic004G285000 Sobic004G086200--Sobic001G134300 Sobic001G245900 Sobic001G245900 Sobic004G086200--Sobic001G245900 Sobic001G306900 Sobic001G306900 Sobic004G086200--Sobic001G306900 Sobic004G086200--Sobic010G096000 Sobic010G279900 Sobic010G279900 Sobic004G086200--Sobic010G279900 Sobic001G246500 Sobic001G246500 Sobic004G086200--Sobic001G246500 Sobic010G065300 Sobic010G065300 Sobic004G086200--Sobic010G065300 Sobic003G409200--Sobic001G346900 Sobic010G215900 Sobic010G215900 Sobic003G409200--Sobic010G215900 Sobic004G111000 Sobic004G111000 Sobic003G409200--Sobic004G111000 Sobic008G057000 Sobic008G057000 Sobic003G409200--Sobic008G057000 Sobic003G427100 Sobic003G427100 Sobic003G409200--Sobic003G427100 Sobic001G501800 Sobic001G501800 Sobic003G409200--Sobic001G501800 Sobic003G409200--Sobic004G285000 Sobic003G409200--Sobic010G279900 Sobic002G145800 Sobic002G145800 Sobic003G409200--Sobic002G145800 Sobic001G134300--Sobic010G065300 Sobic001G134300--Sobic001G306900 Sobic010G001100 Sobic010G001100 Sobic001G134300--Sobic010G001100 Sobic004G156500 Sobic004G156500 Sobic001G134300--Sobic004G156500 Sobic001G134300--Sobic004G086200 Sobic001G398800 Sobic001G398800 Sobic001G134300--Sobic001G398800 Sobic001G090800 Sobic001G090800 Sobic001G134300--Sobic001G090800 Sobic001G134300--Sobic001G346900 Sobic002G153700 Sobic002G153700 Sobic001G134300--Sobic002G153700 Sobic007G168300 Sobic007G168300 Sobic003G042400--Sobic007G168300 Sobic001G376900 Sobic001G376900 Sobic003G042400--Sobic001G376900 Sobic003G042400--Sobic001G346900 Sobic009G158100 Sobic009G158100 Sobic003G042400--Sobic009G158100 Sobic001G145400 Sobic001G145400 Sobic003G042400--Sobic001G145400 Sobic001G052400 Sobic001G052400 Sobic003G042400--Sobic001G052400 Sobic003G042400--Sobic008G147200 Sobic009G255600 Sobic009G255600 Sobic003G042400--Sobic009G255600 Sobic007G126500 Sobic007G126500 Sobic003G042400--Sobic007G126500 Sobic004G321700 Sobic004G321700 Sobic008G147200--Sobic004G321700 Sobic005G137700 Sobic005G137700 Sobic008G147200--Sobic005G137700 Sobic006G269800 Sobic006G269800 Sobic008G147200--Sobic006G269800 Sobic010G186600 Sobic010G186600 Sobic008G147200--Sobic010G186600 Sobic008G147200--Sobic002G145800 Sobic010G007100 Sobic010G007100 Sobic008G147200--Sobic010G007100 Sobic008G147200--Sobic001G346900 Sobic008G147200--Sobic003G042400 Sobic001G291800 Sobic001G291800 Sobic008G147200--Sobic001G291800 Sobic004G285000--Sobic004G086200 Sobic004G285000--Sobic004G111000 Sobic004G285000--Sobic001G346900 Sobic004G285000--Sobic003G427100 Sobic009G151200 Sobic009G151200 Sobic004G285000--Sobic009G151200 Sobic004G285000--Sobic010G215900 Sobic004G285000--Sobic003G409200 Sobic007G044100 Sobic007G044100 Sobic004G285000--Sobic007G044100 Sobic001G013300 Sobic001G013300 Sobic004G285000--Sobic001G013300 Sobic002G154000 Sobic002G154000 Sobic003G416700--Sobic002G154000 Sobic002G264200 Sobic002G264200 Sobic003G416700--Sobic002G264200 Sobic001G461400 Sobic001G461400 Sobic003G416700--Sobic001G461400 Sobic007G183900 Sobic007G183900 Sobic003G416700--Sobic007G183900 Sobic001G051700 Sobic001G051700 Sobic003G416700--Sobic001G051700 Sobic003G360400 Sobic003G360400 Sobic003G416700--Sobic003G360400 Sobic009G119000 Sobic009G119000 Sobic003G416700--Sobic009G119000 Sobic001G063700 Sobic001G063700 Sobic003G416700--Sobic001G063700 Sobic010G275500 Sobic010G275500 Sobic003G416700--Sobic010G275500 Sobic010G096000--Sobic001G246500 Sobic008G100100 Sobic008G100100 Sobic010G096000--Sobic008G100100 Sobic010G096000--Sobic004G086200 Sobic010G096000--Sobic001G306900 Sobic010G096000--Sobic001G346900 Sobic008G173100 Sobic008G173100 Sobic010G096000--Sobic008G173100 Sobic010G096000--Sobic003G416700 Sobic001G155400 Sobic001G155400 Sobic010G096000--Sobic001G155400 Sobic010G096000--Sobic008G147200 Sobic002G422100--Sobic009G119000 Sobic003G212900 Sobic003G212900 Sobic002G422100--Sobic003G212900 Sobic002G422100--Sobic003G416700 Sobic002G422100--Sobic001G134300 Sobic002G422100--Sobic001G346900 Sobic002G422100--Sobic010G001100 Sobic001G091400 Sobic001G091400 Sobic002G422100--Sobic001G091400 Sobic002G422100--Sobic002G154000 Sobic002G422100--Sobic001G063700
Octagon: transcription factors


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