Gene annotation
Transcriptome id Sobic.002G422100.1,Sobic.002G422100.4
Synonym emb1011
Functional annotation EMB1011, putative, expressed
UniProt A0A1W0W7W8 , A0A1W0W823
Pfam -
Panther DB PTHR34418
NCBI CDD -
KEGG Orthology K14317; NUP214, nuclear pore complex protein Nup214
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55540 : Nuclear pore complex protein
RAP-DB (Rice) LOC_Os07g48602.1 : EMB1011, putative, expressed
MaizeGDB (Corn) Zm00025a049199 , Zm00025a038478
Brachypodium KQK14576
Barley HORVU0Hr1G002300.1
Wheat TraesCS2B02G117700 , TraesCS2B02G117700 , TraesCS2D02G100000 , TraesCS2D02G100000 , TraesCS2A02G091700 , TraesCS2A02G091700 , TraesCS2A02G100500 , TraesCS2A02G100500 , TraesCS2D02G090600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G119000 tetratricopeptide repeat containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
2 Sobic.003G212900 zinc ion binding protein, putative, expressed -
3 Sobic.003G416700 homeobox domain containing protein, expressed -
4 Sobic.001G134300 - K17613: calcineurin-binding protein cabin-1
5 Sobic.001G346900 RNA cap guanine-N2 methyltransferase domain containing protein, expressed K14292: trimethylguanosine synthase
6 Sobic.010G001100 chromo domain containing protein, expressed -
7 Sobic.001G091400 expressed protein -
8 Sobic.002G154000 EDM2, putative, expressed -
9 Sobic.001G063700 expressed protein -
10 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
11 Sobic.004G309900 cold-induced protein, putative, expressed K13174: THO complex subunit 5
12 Sobic.009G255600 cleavage and polyadenylation specificity factor, putative, expressed K10610: DNA damage-binding protein 1
13 Sobic.002G153700 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
14 Sobic.006G224800 expressed protein -
15 Sobic.004G086200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)
16 Sobic.001G219900 expressed protein -
17 Sobic.006G040800 expressed protein -
18 Sobic.004G265500 SET domain protein SDG117, putative, expressed -
19 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
20 Sobic.002G399800 PWWP domain containing protein, expressed -


Gene co-expression network
sample Sobic002G422100 Sobic002G422100 Sobic009G119000 Sobic009G119000 Sobic002G422100--Sobic009G119000 Sobic003G212900 Sobic003G212900 Sobic002G422100--Sobic003G212900 Sobic003G416700 Sobic003G416700 Sobic002G422100--Sobic003G416700 Sobic001G134300 Sobic001G134300 Sobic002G422100--Sobic001G134300 Sobic001G346900 Sobic001G346900 Sobic002G422100--Sobic001G346900 Sobic010G001100 Sobic010G001100 Sobic002G422100--Sobic010G001100 Sobic001G091400 Sobic001G091400 Sobic002G422100--Sobic001G091400 Sobic002G154000 Sobic002G154000 Sobic002G422100--Sobic002G154000 Sobic001G063700 Sobic001G063700 Sobic002G422100--Sobic001G063700 Sobic002G153700 Sobic002G153700 Sobic009G119000--Sobic002G153700 Sobic003G059750 Sobic003G059750 Sobic009G119000--Sobic003G059750 Sobic002G071500 Sobic002G071500 Sobic009G119000--Sobic002G071500 Sobic010G065300 Sobic010G065300 Sobic009G119000--Sobic010G065300 Sobic008G153000 Sobic008G153000 Sobic009G119000--Sobic008G153000 Sobic010G275500 Sobic010G275500 Sobic009G119000--Sobic010G275500 Sobic009G119000--Sobic003G416700 Sobic004G048800 Sobic004G048800 Sobic009G119000--Sobic004G048800 Sobic001G311500 Sobic001G311500 Sobic009G119000--Sobic001G311500 Sobic001G135500 Sobic001G135500 Sobic003G212900--Sobic001G135500 Sobic010G077500 Sobic010G077500 Sobic003G212900--Sobic010G077500 Sobic003G212900--Sobic002G422100 Sobic003G212900--Sobic003G416700 Sobic001G042200 Sobic001G042200 Sobic003G212900--Sobic001G042200 Sobic004G309900 Sobic004G309900 Sobic003G212900--Sobic004G309900 Sobic006G224800 Sobic006G224800 Sobic003G212900--Sobic006G224800 Sobic008G058800 Sobic008G058800 Sobic003G212900--Sobic008G058800 Sobic002G295500 Sobic002G295500 Sobic003G212900--Sobic002G295500 Sobic003G416700--Sobic002G154000 Sobic002G264200 Sobic002G264200 Sobic003G416700--Sobic002G264200 Sobic001G461400 Sobic001G461400 Sobic003G416700--Sobic001G461400 Sobic007G183900 Sobic007G183900 Sobic003G416700--Sobic007G183900 Sobic001G051700 Sobic001G051700 Sobic003G416700--Sobic001G051700 Sobic003G360400 Sobic003G360400 Sobic003G416700--Sobic003G360400 Sobic003G416700--Sobic009G119000 Sobic003G416700--Sobic001G063700 Sobic003G416700--Sobic010G275500 Sobic001G134300--Sobic010G065300 Sobic001G306900 Sobic001G306900 Sobic001G134300--Sobic001G306900 Sobic001G134300--Sobic010G001100 Sobic004G156500 Sobic004G156500 Sobic001G134300--Sobic004G156500 Sobic004G086200 Sobic004G086200 Sobic001G134300--Sobic004G086200 Sobic001G398800 Sobic001G398800 Sobic001G134300--Sobic001G398800 Sobic001G090800 Sobic001G090800 Sobic001G134300--Sobic001G090800 Sobic001G134300--Sobic001G346900 Sobic001G134300--Sobic002G153700 Sobic001G346900--Sobic004G086200 Sobic003G409200 Sobic003G409200 Sobic001G346900--Sobic003G409200 Sobic001G346900--Sobic001G134300 Sobic003G042400 Sobic003G042400 Sobic001G346900--Sobic003G042400 Sobic008G147200 Sobic008G147200 Sobic001G346900--Sobic008G147200 Sobic004G285000 Sobic004G285000 Sobic001G346900--Sobic004G285000 Sobic001G346900--Sobic003G416700 Sobic010G096000 Sobic010G096000 Sobic001G346900--Sobic010G096000 Sobic001G346900--Sobic002G422100 Sobic010G001100--Sobic010G065300 Sobic010G001100--Sobic004G048800 Sobic002G396500 Sobic002G396500 Sobic010G001100--Sobic002G396500 Sobic003G293200 Sobic003G293200 Sobic010G001100--Sobic003G293200 Sobic004G242400 Sobic004G242400 Sobic010G001100--Sobic004G242400 Sobic009G109200 Sobic009G109200 Sobic010G001100--Sobic009G109200 Sobic010G001100--Sobic002G154000 Sobic001G352900 Sobic001G352900 Sobic010G001100--Sobic001G352900 Sobic009G256300 Sobic009G256300 Sobic010G001100--Sobic009G256300 Sobic001G091400--Sobic002G071500 Sobic001G026200 Sobic001G026200 Sobic001G091400--Sobic001G026200 Sobic010G116600 Sobic010G116600 Sobic001G091400--Sobic010G116600 Sobic008G014500 Sobic008G014500 Sobic001G091400--Sobic008G014500 Sobic010G236400 Sobic010G236400 Sobic001G091400--Sobic010G236400 Sobic003G289400 Sobic003G289400 Sobic001G091400--Sobic003G289400 Sobic001G091400--Sobic001G398800 Sobic001G091400--Sobic007G183900 Sobic001G452000 Sobic001G452000 Sobic001G091400--Sobic001G452000 Sobic002G154000--Sobic003G360400 Sobic002G154000--Sobic003G416700 Sobic010G112100 Sobic010G112100 Sobic002G154000--Sobic010G112100 Sobic002G154000--Sobic001G063700 Sobic002G154000--Sobic010G001100 Sobic002G154000--Sobic001G461400 Sobic001G433800 Sobic001G433800 Sobic002G154000--Sobic001G433800 Sobic002G154000--Sobic004G048800 Sobic007G063000 Sobic007G063000 Sobic002G154000--Sobic007G063000 Sobic001G063700--Sobic001G461400 Sobic001G063700--Sobic003G360400 Sobic001G063700--Sobic010G112100 Sobic001G063700--Sobic002G154000 Sobic003G188400 Sobic003G188400 Sobic001G063700--Sobic003G188400 Sobic001G063700--Sobic001G433800 Sobic001G063700--Sobic009G256300 Sobic008G002500 Sobic008G002500 Sobic001G063700--Sobic008G002500 Sobic001G354600 Sobic001G354600 Sobic001G063700--Sobic001G354600
Octagon: transcription factors


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