Gene annotation
Transcriptome id Sobic.001G091400.1
Synonym Sb01g008230
Functional annotation expressed protein
UniProt C5X160
Pfam PF12776 PF07227
Panther DB PTHR31704 PTHR31704:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G05410 : Protein of unknown function (DUF1423)
RAP-DB (Rice) LOC_Os03g53590.2 : expressed protein
MaizeGDB (Corn) Zm00025a008132
Brachypodium -
Barley -
Wheat TraesCS5D02G395300 , TraesCS5D02G395300 , TraesCS5A02G385300 , TraesCS5A02G385300 , TraesCS5A02G385300 , TraesCS5B02G390300 , TraesCS5B02G390300 , TraesCS5B02G390300
Populus -


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cDNA sequences
Sobic.001G091400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
2 Sobic.001G026200 heat shock protein DnaJ, putative, expressed K09534: DnaJ homolog subfamily C member 14
3 Sobic.010G116600 FHA domain containing protein, putative, expressed -
4 Sobic.008G014500 RNA recognition motif containing protein, expressed K13161: heterogeneous nuclear ribonucleoprotein R
5 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2
6 Sobic.003G289400 farnesyltransferase subunit beta, putative, expressed K05954: protein farnesyltransferase subunit beta
7 Sobic.001G398800 FHA domain containing protein, putative, expressed -
8 Sobic.007G183900 ubiquitin family protein, putative, expressed -
9 Sobic.001G452000 heat shock protein DnaJ, putative, expressed K03686: molecular chaperone DnaJ
10 Sobic.009G119000 tetratricopeptide repeat containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
11 Sobic.001G522600 PHD-finger domain containing protein, putative, expressed -
12 Sobic.003G372700 expressed protein -
13 Sobic.008G153000 MATH domain containing protein, expressed -
14 Sobic.002G422100 EMB1011, putative, expressed K14317: NUP214, nuclear pore complex protein Nup214
15 Sobic.007G119200 intracellular protein transport protein USO1-related, putative, expressed -
16 Sobic.007G041500 diacylglycerol kinase, putative, expressed -
17 Sobic.010G276900 - -
18 Sobic.002G264200 RNA recognition motif containing protein, expressed -
19 Sobic.002G299700 ATGRIP/GRIP, putative, expressed -
20 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein


Gene co-expression network
sample Sobic001G091400 Sobic001G091400 Sobic002G071500 Sobic002G071500 Sobic001G091400--Sobic002G071500 Sobic001G026200 Sobic001G026200 Sobic001G091400--Sobic001G026200 Sobic010G116600 Sobic010G116600 Sobic001G091400--Sobic010G116600 Sobic008G014500 Sobic008G014500 Sobic001G091400--Sobic008G014500 Sobic010G236400 Sobic010G236400 Sobic001G091400--Sobic010G236400 Sobic003G289400 Sobic003G289400 Sobic001G091400--Sobic003G289400 Sobic001G398800 Sobic001G398800 Sobic001G091400--Sobic001G398800 Sobic007G183900 Sobic007G183900 Sobic001G091400--Sobic007G183900 Sobic001G452000 Sobic001G452000 Sobic001G091400--Sobic001G452000 Sobic005G112300 Sobic005G112300 Sobic002G071500--Sobic005G112300 Sobic003G408600 Sobic003G408600 Sobic002G071500--Sobic003G408600 Sobic008G009700 Sobic008G009700 Sobic002G071500--Sobic008G009700 Sobic002G071500--Sobic010G116600 Sobic002G071500--Sobic001G026200 Sobic002G153700 Sobic002G153700 Sobic002G071500--Sobic002G153700 Sobic010G069100 Sobic010G069100 Sobic002G071500--Sobic010G069100 Sobic003G119000 Sobic003G119000 Sobic002G071500--Sobic003G119000 Sobic010G201500 Sobic010G201500 Sobic002G071500--Sobic010G201500 Sobic001G026200--Sobic002G071500 Sobic001G026200--Sobic010G116600 Sobic001G026200--Sobic002G153700 Sobic001G026200--Sobic010G236400 Sobic003G360400 Sobic003G360400 Sobic001G026200--Sobic003G360400 Sobic009G119000 Sobic009G119000 Sobic001G026200--Sobic009G119000 Sobic001G026200--Sobic001G398800 Sobic001G026200--Sobic003G119000 Sobic009G044800 Sobic009G044800 Sobic001G026200--Sobic009G044800 Sobic010G116600--Sobic002G071500 Sobic002G299700 Sobic002G299700 Sobic010G116600--Sobic002G299700 Sobic003G093800 Sobic003G093800 Sobic010G116600--Sobic003G093800 Sobic010G116600--Sobic009G044800 Sobic004G072100 Sobic004G072100 Sobic010G116600--Sobic004G072100 Sobic010G116600--Sobic010G236400 Sobic010G275500 Sobic010G275500 Sobic010G116600--Sobic010G275500 Sobic010G116600--Sobic003G408600 Sobic010G053800 Sobic010G053800 Sobic010G116600--Sobic010G053800 Sobic010G166400 Sobic010G166400 Sobic008G014500--Sobic010G166400 Sobic008G014500--Sobic001G091400 Sobic006G200700 Sobic006G200700 Sobic008G014500--Sobic006G200700 Sobic008G014500--Sobic010G236400 Sobic002G275600 Sobic002G275600 Sobic008G014500--Sobic002G275600 Sobic007G075900 Sobic007G075900 Sobic008G014500--Sobic007G075900 Sobic010G209400 Sobic010G209400 Sobic008G014500--Sobic010G209400 Sobic008G014500--Sobic009G119000 Sobic001G522600 Sobic001G522600 Sobic008G014500--Sobic001G522600 Sobic004G084300 Sobic004G084300 Sobic010G236400--Sobic004G084300 Sobic002G264200 Sobic002G264200 Sobic010G236400--Sobic002G264200 Sobic010G236400--Sobic010G069100 Sobic002G126500 Sobic002G126500 Sobic010G236400--Sobic002G126500 Sobic004G274200 Sobic004G274200 Sobic010G236400--Sobic004G274200 Sobic010G236400--Sobic010G116600 Sobic010G236400--Sobic007G183900 Sobic010G236400--Sobic002G071500 Sobic003G401100 Sobic003G401100 Sobic010G236400--Sobic003G401100 Sobic006G173100 Sobic006G173100 Sobic003G289400--Sobic006G173100 Sobic007G118200 Sobic007G118200 Sobic003G289400--Sobic007G118200 Sobic003G289400--Sobic001G091400 Sobic010G245000 Sobic010G245000 Sobic003G289400--Sobic010G245000 Sobic001G090400 Sobic001G090400 Sobic003G289400--Sobic001G090400 Sobic003G081000 Sobic003G081000 Sobic003G289400--Sobic003G081000 Sobic006G195700 Sobic006G195700 Sobic003G289400--Sobic006G195700 Sobic003G289400--Sobic008G014500 Sobic001G408700 Sobic001G408700 Sobic003G289400--Sobic001G408700 Sobic004G048800 Sobic004G048800 Sobic001G398800--Sobic004G048800 Sobic001G398800--Sobic001G026200 Sobic001G398800--Sobic003G360400 Sobic001G134300 Sobic001G134300 Sobic001G398800--Sobic001G134300 Sobic001G398800--Sobic002G071500 Sobic010G001100 Sobic010G001100 Sobic001G398800--Sobic010G001100 Sobic007G090430 Sobic007G090430 Sobic001G398800--Sobic007G090430 Sobic010G065300 Sobic010G065300 Sobic001G398800--Sobic010G065300 Sobic004G039200 Sobic004G039200 Sobic001G398800--Sobic004G039200 Sobic003G416700 Sobic003G416700 Sobic007G183900--Sobic003G416700 Sobic006G118700 Sobic006G118700 Sobic007G183900--Sobic006G118700 Sobic007G183900--Sobic003G360400 Sobic007G183900--Sobic010G236400 Sobic007G183900--Sobic009G044800 Sobic007G183900--Sobic010G069100 Sobic007G183900--Sobic010G275500 Sobic001G354600 Sobic001G354600 Sobic007G183900--Sobic001G354600 Sobic007G183900--Sobic002G264200 Sobic004G084700 Sobic004G084700 Sobic001G452000--Sobic004G084700 Sobic005G118600 Sobic005G118600 Sobic001G452000--Sobic005G118600 Sobic001G441400 Sobic001G441400 Sobic001G452000--Sobic001G441400 Sobic001G452000--Sobic010G236400 Sobic003G445400 Sobic003G445400 Sobic001G452000--Sobic003G445400 Sobic004G067700 Sobic004G067700 Sobic001G452000--Sobic004G067700 Sobic001G452000--Sobic001G091400 Sobic008G084700 Sobic008G084700 Sobic001G452000--Sobic008G084700 Sobic002G260400 Sobic002G260400 Sobic001G452000--Sobic002G260400
Octagon: transcription factors


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