Gene annotation
Transcriptome id Sobic.001G398800.1
Synonym Sb01g037760, emb1967
Functional annotation FHA domain containing protein, putative, expressed
UniProt A0A1B6QNQ3
Pfam PF00498 PF13325
Panther DB PTHR13233 PTHR13233:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G54350 : Forkhead-associated (FHA) domain-containing protein
RAP-DB (Rice) LOC_Os03g58640.1 : FHA domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a016547
Brachypodium KQK12651
Barley HORVU5Hr1G107190.12 , HORVU5Hr1G107190.11 , HORVU5Hr1G107190.10 , HORVU5Hr1G107190.9 , HORVU5Hr1G107190.8 , HORVU5Hr1G107190.7 , HORVU5Hr1G107190.6 , HORVU5Hr1G107190.5 , HORVU5Hr1G107190.4 , HORVU5Hr1G107190.3 , HORVU5Hr1G107190.2 , HORVU5Hr1G107190.1 , HORVU2Hr1G013180.2
Wheat TraesCS5B02G452800 , TraesCS5B02G452800 , TraesCS5A02G448100 , TraesCS5B02G455800 , TraesCS5D02G454900 , TraesCS5D02G454900
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G048800 - K12599: SKI2, antiviral helicase SKI2
2 Sobic.001G026200 heat shock protein DnaJ, putative, expressed K09534: DnaJ homolog subfamily C member 14
3 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
4 Sobic.001G134300 - K17613: calcineurin-binding protein cabin-1
5 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
6 Sobic.010G001100 chromo domain containing protein, expressed -
7 Sobic.007G090430 - -
8 Sobic.010G065300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
9 Sobic.004G039200 splicing factor 3B subunit 1, putative, expressed K12828: SF3B1, splicing factor 3B subunit 1
10 Sobic.002G154000 EDM2, putative, expressed -
11 Sobic.003G133900 exonuclease, putative, expressed K18417: ERI1 exoribonuclease 2
12 Sobic.002G153700 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
13 Sobic.002G083500 OsFBX136 - F-box domain containing protein, expressed -
14 Sobic.004G009600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
15 Sobic.004G242400 nuclear-pore anchor, putative, expressed K09291: TPR, MLP1, nucleoprotein TPR
16 Sobic.002G317200 uncharacterized ACR, COG1590 family protein, expressed K15450: tRNA wybutosine-synthesizing protein 3
17 Sobic.003G101500 dnaJ domain containing protein, expressed -
18 Sobic.008G009700 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
19 Sobic.001G025000 FACT complex subunit SPT16, putative, expressed -
20 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2


Gene co-expression network
sample Sobic001G398800 Sobic001G398800 Sobic004G048800 Sobic004G048800 Sobic001G398800--Sobic004G048800 Sobic001G026200 Sobic001G026200 Sobic001G398800--Sobic001G026200 Sobic003G360400 Sobic003G360400 Sobic001G398800--Sobic003G360400 Sobic001G134300 Sobic001G134300 Sobic001G398800--Sobic001G134300 Sobic002G071500 Sobic002G071500 Sobic001G398800--Sobic002G071500 Sobic010G001100 Sobic010G001100 Sobic001G398800--Sobic010G001100 Sobic007G090430 Sobic007G090430 Sobic001G398800--Sobic007G090430 Sobic010G065300 Sobic010G065300 Sobic001G398800--Sobic010G065300 Sobic004G039200 Sobic004G039200 Sobic001G398800--Sobic004G039200 Sobic008G098300 Sobic008G098300 Sobic004G048800--Sobic008G098300 Sobic004G048800--Sobic001G398800 Sobic004G242400 Sobic004G242400 Sobic004G048800--Sobic004G242400 Sobic004G048800--Sobic010G001100 Sobic004G048800--Sobic003G360400 Sobic001G363500 Sobic001G363500 Sobic004G048800--Sobic001G363500 Sobic002G317200 Sobic002G317200 Sobic004G048800--Sobic002G317200 Sobic001G433800 Sobic001G433800 Sobic004G048800--Sobic001G433800 Sobic005G112300 Sobic005G112300 Sobic004G048800--Sobic005G112300 Sobic001G026200--Sobic002G071500 Sobic010G116600 Sobic010G116600 Sobic001G026200--Sobic010G116600 Sobic002G153700 Sobic002G153700 Sobic001G026200--Sobic002G153700 Sobic010G236400 Sobic010G236400 Sobic001G026200--Sobic010G236400 Sobic001G026200--Sobic003G360400 Sobic009G119000 Sobic009G119000 Sobic001G026200--Sobic009G119000 Sobic001G026200--Sobic001G398800 Sobic003G119000 Sobic003G119000 Sobic001G026200--Sobic003G119000 Sobic009G044800 Sobic009G044800 Sobic001G026200--Sobic009G044800 Sobic010G112100 Sobic010G112100 Sobic003G360400--Sobic010G112100 Sobic002G154000 Sobic002G154000 Sobic003G360400--Sobic002G154000 Sobic001G354600 Sobic001G354600 Sobic003G360400--Sobic001G354600 Sobic003G360400--Sobic001G433800 Sobic003G389200 Sobic003G389200 Sobic003G360400--Sobic003G389200 Sobic003G360400--Sobic009G044800 Sobic003G360400--Sobic005G112300 Sobic007G063000 Sobic007G063000 Sobic003G360400--Sobic007G063000 Sobic009G256300 Sobic009G256300 Sobic003G360400--Sobic009G256300 Sobic001G134300--Sobic010G065300 Sobic001G306900 Sobic001G306900 Sobic001G134300--Sobic001G306900 Sobic001G134300--Sobic010G001100 Sobic004G156500 Sobic004G156500 Sobic001G134300--Sobic004G156500 Sobic004G086200 Sobic004G086200 Sobic001G134300--Sobic004G086200 Sobic001G134300--Sobic001G398800 Sobic001G090800 Sobic001G090800 Sobic001G134300--Sobic001G090800 Sobic001G346900 Sobic001G346900 Sobic001G134300--Sobic001G346900 Sobic001G134300--Sobic002G153700 Sobic002G071500--Sobic005G112300 Sobic003G408600 Sobic003G408600 Sobic002G071500--Sobic003G408600 Sobic008G009700 Sobic008G009700 Sobic002G071500--Sobic008G009700 Sobic002G071500--Sobic010G116600 Sobic002G071500--Sobic001G026200 Sobic002G071500--Sobic002G153700 Sobic010G069100 Sobic010G069100 Sobic002G071500--Sobic010G069100 Sobic002G071500--Sobic003G119000 Sobic010G201500 Sobic010G201500 Sobic002G071500--Sobic010G201500 Sobic010G001100--Sobic010G065300 Sobic010G001100--Sobic004G048800 Sobic002G396500 Sobic002G396500 Sobic010G001100--Sobic002G396500 Sobic003G293200 Sobic003G293200 Sobic010G001100--Sobic003G293200 Sobic010G001100--Sobic004G242400 Sobic009G109200 Sobic009G109200 Sobic010G001100--Sobic009G109200 Sobic010G001100--Sobic002G154000 Sobic001G352900 Sobic001G352900 Sobic010G001100--Sobic001G352900 Sobic010G001100--Sobic009G256300 Sobic008G173100 Sobic008G173100 Sobic007G090430--Sobic008G173100 Sobic009G177500 Sobic009G177500 Sobic007G090430--Sobic009G177500 Sobic001G384300 Sobic001G384300 Sobic007G090430--Sobic001G384300 Sobic009G260500 Sobic009G260500 Sobic007G090430--Sobic009G260500 Sobic002G063900 Sobic002G063900 Sobic007G090430--Sobic002G063900 Sobic007G090430--Sobic001G398800 Sobic007G090430--Sobic004G048800 Sobic005G207500 Sobic005G207500 Sobic007G090430--Sobic005G207500 Sobic007G090430--Sobic002G317200 Sobic010G065300--Sobic010G001100 Sobic010G065300--Sobic008G009700 Sobic010G065300--Sobic002G153700 Sobic010G065300--Sobic001G306900 Sobic010G065300--Sobic001G134300 Sobic010G065300--Sobic003G293200 Sobic010G065300--Sobic009G119000 Sobic010G065300--Sobic004G156500 Sobic010G065300--Sobic004G048800 Sobic009G024000 Sobic009G024000 Sobic004G039200--Sobic009G024000 Sobic003G101500 Sobic003G101500 Sobic004G039200--Sobic003G101500 Sobic007G161000 Sobic007G161000 Sobic004G039200--Sobic007G161000 Sobic007G065400 Sobic007G065400 Sobic004G039200--Sobic007G065400 Sobic008G113100 Sobic008G113100 Sobic004G039200--Sobic008G113100 Sobic008G028700 Sobic008G028700 Sobic004G039200--Sobic008G028700 Sobic004G039200--Sobic008G009700 Sobic007G117400 Sobic007G117400 Sobic004G039200--Sobic007G117400 Sobic007G054400 Sobic007G054400 Sobic004G039200--Sobic007G054400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.