Gene annotation
Transcriptome id Sobic.007G090430.1
Synonym -
Functional annotation -
UniProt A0A1Z5R9D6
Pfam PF07910
Panther DB PTHR24375 PTHR24375:SF183
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48380 : Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2
RAP-DB (Rice) LOC_Os12g18760.2 : peptidase family C78 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a024972
Brachypodium KQJ91673 , KQJ91629
Barley HORVU7Hr1G081420.8 , HORVU7Hr1G081420.9 , HORVU7Hr1G081420.4 , HORVU7Hr1G081420.5 , HORVU7Hr1G081420.6 , HORVU7Hr1G081420.7 , HORVU7Hr1G081420.2 , HORVU7Hr1G081420.3 , HORVU7Hr1G081420.1
Wheat TraesCS7A02G341300 , TraesCS7A02G341300 , TraesCS7A02G341300 , TraesCS7A02G341300 , TraesCS7A02G341300 , TraesCS7D02G338400 , TraesCS7D02G338400 , TraesCS7D02G338400 , TraesCS7D02G338400 , TraesCS7B02G242500 , TraesCS7B02G242500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G173100 actin, putative, expressed K11662: ACTR6, actin-related protein 6
2 Sobic.009G177500 CCR4-NOT transcription factor, putative, expressed K12605: CNOT2, CCR4-NOT transcription complex subunit 2
3 Sobic.001G384300 myb-like DNA-binding domain containing protein, expressed -
4 Sobic.009G260500 tetratricopeptide repeat containing protein, putative, expressed K14408: CSTF3, cleavage stimulation factor subunit 3
5 Sobic.002G063900 zinc ion binding protein, putative, expressed -
6 Sobic.001G398800 FHA domain containing protein, putative, expressed -
7 Sobic.004G048800 - K12599: SKI2, antiviral helicase SKI2
8 Sobic.005G207500 AAA-type ATPase family protein, putative, expressed -
9 Sobic.002G317200 uncharacterized ACR, COG1590 family protein, expressed K15450: tRNA wybutosine-synthesizing protein 3
10 Sobic.002G083500 OsFBX136 - F-box domain containing protein, expressed -
11 Sobic.003G059750 - K11797: PHIP, PH-interacting protein
12 Sobic.008G009700 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
13 Sobic.009G126400 glycine-rich protein, putative, expressed K14845: RAI1, RAT1-interacting protein
14 Sobic.010G136600 - -
15 Sobic.006G116100 RNA recognition motif containing protein, putative, expressed -
16 Sobic.001G433800 lissencephaly type-1-like homology motif, putative, expressed -
17 Sobic.007G103600 protein of unknown function DUF1296 domain containing protein, expressed -
18 Sobic.010G185400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
19 Sobic.006G096900 expressed protein -
20 Sobic.005G013200 BAH domain containing protein, expressed -


Gene co-expression network
sample Sobic007G090430 Sobic007G090430 Sobic008G173100 Sobic008G173100 Sobic007G090430--Sobic008G173100 Sobic009G177500 Sobic009G177500 Sobic007G090430--Sobic009G177500 Sobic001G384300 Sobic001G384300 Sobic007G090430--Sobic001G384300 Sobic009G260500 Sobic009G260500 Sobic007G090430--Sobic009G260500 Sobic002G063900 Sobic002G063900 Sobic007G090430--Sobic002G063900 Sobic001G398800 Sobic001G398800 Sobic007G090430--Sobic001G398800 Sobic004G048800 Sobic004G048800 Sobic007G090430--Sobic004G048800 Sobic005G207500 Sobic005G207500 Sobic007G090430--Sobic005G207500 Sobic002G317200 Sobic002G317200 Sobic007G090430--Sobic002G317200 Sobic002G260400 Sobic002G260400 Sobic008G173100--Sobic002G260400 Sobic008G173100--Sobic007G090430 Sobic006G116100 Sobic006G116100 Sobic008G173100--Sobic006G116100 Sobic008G173100--Sobic002G063900 Sobic002G264200 Sobic002G264200 Sobic008G173100--Sobic002G264200 Sobic010G236400 Sobic010G236400 Sobic008G173100--Sobic010G236400 Sobic008G153000 Sobic008G153000 Sobic008G173100--Sobic008G153000 Sobic001G311500 Sobic001G311500 Sobic008G173100--Sobic001G311500 Sobic010G245000 Sobic010G245000 Sobic008G173100--Sobic010G245000 Sobic001G433800 Sobic001G433800 Sobic009G177500--Sobic001G433800 Sobic001G227200 Sobic001G227200 Sobic009G177500--Sobic001G227200 Sobic005G112300 Sobic005G112300 Sobic009G177500--Sobic005G112300 Sobic004G140600 Sobic004G140600 Sobic009G177500--Sobic004G140600 Sobic008G047800 Sobic008G047800 Sobic009G177500--Sobic008G047800 Sobic010G112100 Sobic010G112100 Sobic009G177500--Sobic010G112100 Sobic009G177500--Sobic007G090430 Sobic001G392300 Sobic001G392300 Sobic009G177500--Sobic001G392300 Sobic002G343901 Sobic002G343901 Sobic009G177500--Sobic002G343901 Sobic001G384300--Sobic007G090430 Sobic006G096900 Sobic006G096900 Sobic001G384300--Sobic006G096900 Sobic002G083500 Sobic002G083500 Sobic001G384300--Sobic002G083500 Sobic001G384300--Sobic001G227200 Sobic001G384300--Sobic002G343901 Sobic001G384300--Sobic001G433800 Sobic001G456900 Sobic001G456900 Sobic001G384300--Sobic001G456900 Sobic008G113100 Sobic008G113100 Sobic001G384300--Sobic008G113100 Sobic008G162900 Sobic008G162900 Sobic001G384300--Sobic008G162900 Sobic001G219600 Sobic001G219600 Sobic009G260500--Sobic001G219600 Sobic004G009600 Sobic004G009600 Sobic009G260500--Sobic004G009600 Sobic010G277500 Sobic010G277500 Sobic009G260500--Sobic010G277500 Sobic008G009700 Sobic008G009700 Sobic009G260500--Sobic008G009700 Sobic010G139000 Sobic010G139000 Sobic009G260500--Sobic010G139000 Sobic008G028700 Sobic008G028700 Sobic009G260500--Sobic008G028700 Sobic009G040600 Sobic009G040600 Sobic009G260500--Sobic009G040600 Sobic002G309600 Sobic002G309600 Sobic009G260500--Sobic002G309600 Sobic009G260500--Sobic001G311500 Sobic002G063900--Sobic008G173100 Sobic002G063900--Sobic006G116100 Sobic004G357100 Sobic004G357100 Sobic002G063900--Sobic004G357100 Sobic002G063900--Sobic002G260400 Sobic002G063900--Sobic007G090430 Sobic004G246100 Sobic004G246100 Sobic002G063900--Sobic004G246100 Sobic002G278000 Sobic002G278000 Sobic002G063900--Sobic002G278000 Sobic008G149800 Sobic008G149800 Sobic002G063900--Sobic008G149800 SobicK028600 SobicK028600 Sobic002G063900--SobicK028600 Sobic001G398800--Sobic004G048800 Sobic001G026200 Sobic001G026200 Sobic001G398800--Sobic001G026200 Sobic003G360400 Sobic003G360400 Sobic001G398800--Sobic003G360400 Sobic001G134300 Sobic001G134300 Sobic001G398800--Sobic001G134300 Sobic002G071500 Sobic002G071500 Sobic001G398800--Sobic002G071500 Sobic010G001100 Sobic010G001100 Sobic001G398800--Sobic010G001100 Sobic001G398800--Sobic007G090430 Sobic010G065300 Sobic010G065300 Sobic001G398800--Sobic010G065300 Sobic004G039200 Sobic004G039200 Sobic001G398800--Sobic004G039200 Sobic008G098300 Sobic008G098300 Sobic004G048800--Sobic008G098300 Sobic004G048800--Sobic001G398800 Sobic004G242400 Sobic004G242400 Sobic004G048800--Sobic004G242400 Sobic004G048800--Sobic010G001100 Sobic004G048800--Sobic003G360400 Sobic001G363500 Sobic001G363500 Sobic004G048800--Sobic001G363500 Sobic004G048800--Sobic002G317200 Sobic004G048800--Sobic001G433800 Sobic004G048800--Sobic005G112300 Sobic003G059750 Sobic003G059750 Sobic005G207500--Sobic003G059750 Sobic002G153700 Sobic002G153700 Sobic005G207500--Sobic002G153700 Sobic007G103600 Sobic007G103600 Sobic005G207500--Sobic007G103600 Sobic003G119000 Sobic003G119000 Sobic005G207500--Sobic003G119000 Sobic005G207500--Sobic008G009700 Sobic002G353600 Sobic002G353600 Sobic005G207500--Sobic002G353600 Sobic010G069100 Sobic010G069100 Sobic005G207500--Sobic010G069100 Sobic005G207500--Sobic002G071500 Sobic005G207500--Sobic001G026200 Sobic002G317200--Sobic004G048800 Sobic002G317200--Sobic001G219600 Sobic004G314000 Sobic004G314000 Sobic002G317200--Sobic004G314000 Sobic002G317200--Sobic001G433800 Sobic003G095900 Sobic003G095900 Sobic002G317200--Sobic003G095900 Sobic002G317200--Sobic004G242400 Sobic002G397500 Sobic002G397500 Sobic002G317200--Sobic002G397500 Sobic002G317200--Sobic005G112300 Sobic002G317200--Sobic009G260500
Octagon: transcription factors


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