Gene annotation
Transcriptome id Sobic.007G103600.1,Sobic.007G103600.2
Synonym
Functional annotation protein of unknown function DUF1296 domain containing protein, expressed
UniProt A0A1B6PHA7 , A0A1B6PGZ5
Pfam PF06972
Panther DB PTHR12758 PTHR12758:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07660 : Kinase-related protein of unknown function (DUF1296)
RAP-DB (Rice) LOC_Os09g08670.1 : protein of unknown function DUF1296 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a030754
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G103600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G059750 - K11797: PHIP, PH-interacting protein
2 Sobic.005G207500 AAA-type ATPase family protein, putative, expressed -
3 Sobic.005G118600 NB-ARC domain containing protein, expressed -
4 Sobic.003G444800 expressed protein -
5 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
6 Sobic.008G153000 MATH domain containing protein, expressed -
7 Sobic.003G119000 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
8 Sobic.002G264200 RNA recognition motif containing protein, expressed -
9 Sobic.006G032500 - -
10 Sobic.002G112700 glutamine-dependent NAD, putative, expressed K01950: E6.3.5.1, NADSYN1, QNS1, NAD+ synthase (glutamine-hydrolysing)
11 Sobic.002G404700 expressed protein K11367: chromodomain-helicase-DNA-binding protein 1
12 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
13 Sobic.007G167500 expressed protein -
14 Sobic.006G186400 ZOS4-12 - C2H2 zinc finger protein, expressed -
15 Sobic.007G090430 - -
16 Sobic.006G216800 AAA family ATPase, putative, expressed K13339: PEX6, peroxin-6
17 Sobic.010G116600 FHA domain containing protein, putative, expressed -
18 Sobic.006G252900 ubiquitin family protein, putative, expressed -
19 Sobic.007G042400 HEAT repeat family protein, putative, expressed -
20 Sobic.002G103600 glycosyl transferase, group 1 domain containing protein, expressed K03857: PIGA, phosphatidylinositol N-acetylglucosaminyltransferase subunit A


Gene co-expression network
sample Sobic007G103600 Sobic007G103600 Sobic003G059750 Sobic003G059750 Sobic007G103600--Sobic003G059750 Sobic005G207500 Sobic005G207500 Sobic007G103600--Sobic005G207500 Sobic005G118600 Sobic005G118600 Sobic007G103600--Sobic005G118600 Sobic003G444800 Sobic003G444800 Sobic007G103600--Sobic003G444800 Sobic002G071500 Sobic002G071500 Sobic007G103600--Sobic002G071500 Sobic008G153000 Sobic008G153000 Sobic007G103600--Sobic008G153000 Sobic003G119000 Sobic003G119000 Sobic007G103600--Sobic003G119000 Sobic002G264200 Sobic002G264200 Sobic007G103600--Sobic002G264200 Sobic006G032500 Sobic006G032500 Sobic007G103600--Sobic006G032500 Sobic003G059750--Sobic007G103600 Sobic003G059750--Sobic005G207500 Sobic005G112300 Sobic005G112300 Sobic003G059750--Sobic005G112300 Sobic010G279450 Sobic010G279450 Sobic003G059750--Sobic010G279450 Sobic002G404700 Sobic002G404700 Sobic003G059750--Sobic002G404700 Sobic003G059750--Sobic003G444800 Sobic001G311500 Sobic001G311500 Sobic003G059750--Sobic001G311500 Sobic002G405800 Sobic002G405800 Sobic003G059750--Sobic002G405800 Sobic003G059750--Sobic002G071500 Sobic005G207500--Sobic003G059750 Sobic002G153700 Sobic002G153700 Sobic005G207500--Sobic002G153700 Sobic005G207500--Sobic007G103600 Sobic005G207500--Sobic003G119000 Sobic008G009700 Sobic008G009700 Sobic005G207500--Sobic008G009700 Sobic002G353600 Sobic002G353600 Sobic005G207500--Sobic002G353600 Sobic010G069100 Sobic010G069100 Sobic005G207500--Sobic010G069100 Sobic005G207500--Sobic002G071500 Sobic001G026200 Sobic001G026200 Sobic005G207500--Sobic001G026200 Sobic005G118600--Sobic003G059750 Sobic008G084700 Sobic008G084700 Sobic005G118600--Sobic008G084700 Sobic003G225700 Sobic003G225700 Sobic005G118600--Sobic003G225700 Sobic001G065000 Sobic001G065000 Sobic005G118600--Sobic001G065000 Sobic009G166300 Sobic009G166300 Sobic005G118600--Sobic009G166300 Sobic005G118600--Sobic008G153000 Sobic001G114000 Sobic001G114000 Sobic005G118600--Sobic001G114000 Sobic005G118600--Sobic002G071500 Sobic005G118600--Sobic007G103600 SobicK028600 SobicK028600 Sobic003G444800--SobicK028600 Sobic003G444800--Sobic003G059750 Sobic002G103600 Sobic002G103600 Sobic003G444800--Sobic002G103600 Sobic004G357100 Sobic004G357100 Sobic003G444800--Sobic004G357100 Sobic007G042400 Sobic007G042400 Sobic003G444800--Sobic007G042400 Sobic002G112700 Sobic002G112700 Sobic003G444800--Sobic002G112700 Sobic003G444800--Sobic010G279450 Sobic006G234700 Sobic006G234700 Sobic003G444800--Sobic006G234700 Sobic001G376200 Sobic001G376200 Sobic003G444800--Sobic001G376200 Sobic002G071500--Sobic005G112300 Sobic003G408600 Sobic003G408600 Sobic002G071500--Sobic003G408600 Sobic002G071500--Sobic008G009700 Sobic010G116600 Sobic010G116600 Sobic002G071500--Sobic010G116600 Sobic002G071500--Sobic001G026200 Sobic002G071500--Sobic002G153700 Sobic002G071500--Sobic010G069100 Sobic002G071500--Sobic003G119000 Sobic010G201500 Sobic010G201500 Sobic002G071500--Sobic010G201500 Sobic006G116100 Sobic006G116100 Sobic008G153000--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic008G153000--Sobic006G046700 Sobic008G149800 Sobic008G149800 Sobic008G153000--Sobic008G149800 Sobic008G153000--Sobic002G264200 Sobic001G155000 Sobic001G155000 Sobic008G153000--Sobic001G155000 Sobic003G445400 Sobic003G445400 Sobic008G153000--Sobic003G445400 Sobic008G153000--Sobic003G059750 Sobic007G026000 Sobic007G026000 Sobic008G153000--Sobic007G026000 Sobic008G153000--Sobic010G069100 Sobic003G372700 Sobic003G372700 Sobic003G119000--Sobic003G372700 Sobic003G119000--Sobic002G071500 Sobic003G280800 Sobic003G280800 Sobic003G119000--Sobic003G280800 Sobic007G065400 Sobic007G065400 Sobic003G119000--Sobic007G065400 Sobic007G167500 Sobic007G167500 Sobic003G119000--Sobic007G167500 Sobic007G126600 Sobic007G126600 Sobic003G119000--Sobic007G126600 Sobic001G511500 Sobic001G511500 Sobic003G119000--Sobic001G511500 Sobic002G309600 Sobic002G309600 Sobic003G119000--Sobic002G309600 Sobic001G241200 Sobic001G241200 Sobic003G119000--Sobic001G241200 Sobic002G264200--Sobic010G069100 Sobic003G416700 Sobic003G416700 Sobic002G264200--Sobic003G416700 Sobic001G461400 Sobic001G461400 Sobic002G264200--Sobic001G461400 Sobic002G264200--Sobic008G153000 Sobic010G236400 Sobic010G236400 Sobic002G264200--Sobic010G236400 Sobic002G264200--Sobic002G071500 Sobic002G264200--Sobic007G065400 Sobic002G264200--Sobic002G153700 Sobic006G118700 Sobic006G118700 Sobic002G264200--Sobic006G118700 Sobic002G180666 Sobic002G180666 Sobic006G032500--Sobic002G180666 Sobic006G032500--Sobic003G372700 Sobic003G148000 Sobic003G148000 Sobic006G032500--Sobic003G148000 Sobic006G032500--Sobic003G059750 Sobic002G145101 Sobic002G145101 Sobic006G032500--Sobic002G145101 Sobic007G161300 Sobic007G161300 Sobic006G032500--Sobic007G161300 Sobic006G032500--Sobic005G112300 Sobic010G139000 Sobic010G139000 Sobic006G032500--Sobic010G139000 Sobic006G032500--Sobic008G084700
Octagon: transcription factors


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