Gene annotation
Transcriptome id Sobic.002G083500.1
Synonym Sb02g006990
Functional annotation OsFBX136 - F-box domain containing protein, expressed
UniProt A0A1B6QA01
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF75
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G49030 : FBD, F-box and Leucine Rich Repeat domains containing protein
RAP-DB (Rice) LOC_Os04g35990.1 : OsFBX136 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G083500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G384300 myb-like DNA-binding domain containing protein, expressed -
2 Sobic.002G154000 EDM2, putative, expressed -
3 Sobic.001G433800 lissencephaly type-1-like homology motif, putative, expressed -
4 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
5 Sobic.002G260400 - -
6 Sobic.003G133900 exonuclease, putative, expressed K18417: ERI1 exoribonuclease 2
7 Sobic.006G234700 FGGY family of carbohydrate kinases, putative, expressed -
8 Sobic.007G090430 - -
9 Sobic.001G398800 FHA domain containing protein, putative, expressed -
10 Sobic.009G177500 CCR4-NOT transcription factor, putative, expressed K12605: CNOT2, CCR4-NOT transcription complex subunit 2
11 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
12 Sobic.002G063900 zinc ion binding protein, putative, expressed -
13 Sobic.002G264200 RNA recognition motif containing protein, expressed -
14 Sobic.008G173100 actin, putative, expressed K11662: ACTR6, actin-related protein 6
15 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
16 Sobic.004G096400 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
17 Sobic.004G209700 FAR1 family protein, expressed -
18 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
19 Sobic.009G084900 expressed protein -
20 Sobic.007G071200 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2


Gene co-expression network
sample Sobic002G083500 Sobic002G083500 Sobic001G384300 Sobic001G384300 Sobic002G083500--Sobic001G384300 Sobic002G154000 Sobic002G154000 Sobic002G083500--Sobic002G154000 Sobic001G433800 Sobic001G433800 Sobic002G083500--Sobic001G433800 Sobic001G493200 Sobic001G493200 Sobic002G083500--Sobic001G493200 Sobic002G260400 Sobic002G260400 Sobic002G083500--Sobic002G260400 Sobic003G133900 Sobic003G133900 Sobic002G083500--Sobic003G133900 Sobic006G234700 Sobic006G234700 Sobic002G083500--Sobic006G234700 Sobic007G090430 Sobic007G090430 Sobic002G083500--Sobic007G090430 Sobic001G398800 Sobic001G398800 Sobic002G083500--Sobic001G398800 Sobic001G384300--Sobic007G090430 Sobic006G096900 Sobic006G096900 Sobic001G384300--Sobic006G096900 Sobic001G384300--Sobic002G083500 Sobic001G227200 Sobic001G227200 Sobic001G384300--Sobic001G227200 Sobic002G343901 Sobic002G343901 Sobic001G384300--Sobic002G343901 Sobic001G384300--Sobic001G433800 Sobic001G456900 Sobic001G456900 Sobic001G384300--Sobic001G456900 Sobic008G113100 Sobic008G113100 Sobic001G384300--Sobic008G113100 Sobic008G162900 Sobic008G162900 Sobic001G384300--Sobic008G162900 Sobic003G360400 Sobic003G360400 Sobic002G154000--Sobic003G360400 Sobic003G416700 Sobic003G416700 Sobic002G154000--Sobic003G416700 Sobic010G112100 Sobic010G112100 Sobic002G154000--Sobic010G112100 Sobic001G063700 Sobic001G063700 Sobic002G154000--Sobic001G063700 Sobic010G001100 Sobic010G001100 Sobic002G154000--Sobic010G001100 Sobic001G461400 Sobic001G461400 Sobic002G154000--Sobic001G461400 Sobic002G154000--Sobic001G433800 Sobic004G048800 Sobic004G048800 Sobic002G154000--Sobic004G048800 Sobic007G063000 Sobic007G063000 Sobic002G154000--Sobic007G063000 Sobic001G433800--Sobic010G112100 Sobic001G433800--Sobic003G360400 Sobic001G433800--Sobic007G063000 Sobic005G112300 Sobic005G112300 Sobic001G433800--Sobic005G112300 Sobic004G242400 Sobic004G242400 Sobic001G433800--Sobic004G242400 Sobic002G133300 Sobic002G133300 Sobic001G433800--Sobic002G133300 Sobic001G363500 Sobic001G363500 Sobic001G433800--Sobic001G363500 Sobic006G252900 Sobic006G252900 Sobic001G433800--Sobic006G252900 Sobic006G041600 Sobic006G041600 Sobic001G433800--Sobic006G041600 Sobic009G084900 Sobic009G084900 Sobic001G493200--Sobic009G084900 Sobic003G266001 Sobic003G266001 Sobic001G493200--Sobic003G266001 Sobic010G059500 Sobic010G059500 Sobic001G493200--Sobic010G059500 Sobic001G493200--Sobic001G433800 Sobic004G072100 Sobic004G072100 Sobic001G493200--Sobic004G072100 Sobic004G096400 Sobic004G096400 Sobic001G493200--Sobic004G096400 Sobic007G132100 Sobic007G132100 Sobic001G493200--Sobic007G132100 Sobic006G077200 Sobic006G077200 Sobic001G493200--Sobic006G077200 Sobic003G408600 Sobic003G408600 Sobic001G493200--Sobic003G408600 Sobic008G173100 Sobic008G173100 Sobic002G260400--Sobic008G173100 Sobic002G056701 Sobic002G056701 Sobic002G260400--Sobic002G056701 Sobic002G063900 Sobic002G063900 Sobic002G260400--Sobic002G063900 Sobic002G370900 Sobic002G370900 Sobic002G260400--Sobic002G370900 Sobic006G116100 Sobic006G116100 Sobic002G260400--Sobic006G116100 Sobic008G153000 Sobic008G153000 Sobic002G260400--Sobic008G153000 Sobic010G236400 Sobic010G236400 Sobic002G260400--Sobic010G236400 Sobic002G260400--Sobic002G083500 Sobic010G245000 Sobic010G245000 Sobic002G260400--Sobic010G245000 Sobic004G309900 Sobic004G309900 Sobic003G133900--Sobic004G309900 Sobic003G133900--Sobic001G493200 Sobic003G133900--Sobic002G083500 Sobic003G133900--Sobic001G398800 Sobic007G183900 Sobic007G183900 Sobic003G133900--Sobic007G183900 Sobic005G172500 Sobic005G172500 Sobic003G133900--Sobic005G172500 Sobic006G210000 Sobic006G210000 Sobic003G133900--Sobic006G210000 Sobic004G200200 Sobic004G200200 Sobic003G133900--Sobic004G200200 Sobic007G071200 Sobic007G071200 Sobic003G133900--Sobic007G071200 Sobic006G234700--Sobic004G096400 Sobic006G234700--Sobic010G059500 Sobic009G192300 Sobic009G192300 Sobic006G234700--Sobic009G192300 Sobic007G042400 Sobic007G042400 Sobic006G234700--Sobic007G042400 Sobic003G444800 Sobic003G444800 Sobic006G234700--Sobic003G444800 Sobic006G234700--Sobic001G493200 Sobic006G234700--Sobic009G084900 Sobic006G234700--Sobic001G433800 Sobic006G234700--Sobic002G083500 Sobic007G090430--Sobic008G173100 Sobic009G177500 Sobic009G177500 Sobic007G090430--Sobic009G177500 Sobic007G090430--Sobic001G384300 Sobic009G260500 Sobic009G260500 Sobic007G090430--Sobic009G260500 Sobic007G090430--Sobic002G063900 Sobic007G090430--Sobic001G398800 Sobic007G090430--Sobic004G048800 Sobic005G207500 Sobic005G207500 Sobic007G090430--Sobic005G207500 Sobic002G317200 Sobic002G317200 Sobic007G090430--Sobic002G317200 Sobic001G398800--Sobic004G048800 Sobic001G026200 Sobic001G026200 Sobic001G398800--Sobic001G026200 Sobic001G398800--Sobic003G360400 Sobic001G134300 Sobic001G134300 Sobic001G398800--Sobic001G134300 Sobic002G071500 Sobic002G071500 Sobic001G398800--Sobic002G071500 Sobic001G398800--Sobic010G001100 Sobic001G398800--Sobic007G090430 Sobic010G065300 Sobic010G065300 Sobic001G398800--Sobic010G065300 Sobic004G039200 Sobic004G039200 Sobic001G398800--Sobic004G039200
Octagon: transcription factors


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