Gene annotation
Transcriptome id Sobic.006G234700.2,Sobic.006G234700.1
Synonym Sb06g030210
Functional annotation FGGY family of carbohydrate kinases, putative, expressed
UniProt A0A1B6PNI6 , A0A1B6PNI7
Pfam PF00370 PF02782
Panther DB PTHR10196 PTHR10196:SF71
NCBI CDD KOG2517; Ribulose kinase and related carbohydrate kinases
KEGG Orthology -
Gene Ontology GO:0016773; phosphotransferase activity, alcohol group as acceptor GO:0005975carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT4G30310 : FGGY family of carbohydrate kinase
RAP-DB (Rice) LOC_Os02g08130.1,LOC_Os02g08130.3 : FGGY family of carbohydrate kinases, putative, expressed
MaizeGDB (Corn) Zm00025a009601
Brachypodium PNT66011 , PNT66010 , PNT66012 , PNT66009 , KQJ93621 , KQJ93624
Barley HORVU6Hr1G030140.18 , HORVU6Hr1G030140.10 , HORVU6Hr1G030140.11 , HORVU6Hr1G030140.12 , HORVU6Hr1G030140.13 , HORVU6Hr1G030140.14 , HORVU6Hr1G030140.15 , HORVU6Hr1G030140.16 , HORVU6Hr1G030140.17 , HORVU6Hr1G030140.8 , HORVU6Hr1G030140.9 , HORVU6Hr1G030140.2 , HORVU6Hr1G030140.3 , HORVU6Hr1G030140.1 , HORVU6Hr1G030140.6 , HORVU6Hr1G030140.7 , HORVU6Hr1G030140.4 , HORVU6Hr1G030140.5
Wheat TraesCS6A02G151100 , TraesCS6B02G179200 , TraesCS6D02G141300 , TraesCS6D02G141100 , TraesCS6D02G141100 , TraesCS6B02G179400 , TraesCS6B02G179400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G096400 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
2 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
3 Sobic.009G192300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
4 Sobic.007G042400 HEAT repeat family protein, putative, expressed -
5 Sobic.003G444800 expressed protein -
6 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
7 Sobic.009G084900 expressed protein -
8 Sobic.001G433800 lissencephaly type-1-like homology motif, putative, expressed -
9 Sobic.002G083500 OsFBX136 - F-box domain containing protein, expressed -
10 Sobic.K028600 expressed protein -
11 Sobic.001G214600 expressed protein -
12 Sobic.009G247400 PX domain containing protein, putative, expressed K17925: sorting nexin-13
13 Sobic.004G357100 expressed protein -
14 Sobic.010G279450 - K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
15 Sobic.002G063900 zinc ion binding protein, putative, expressed -
16 Sobic.003G095900 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
17 Sobic.004G185800 expressed protein -
18 Sobic.010G140400 poor homologous synapsis 1 protein, putative, expressed -
19 Sobic.003G043000 expressed protein -
20 Sobic.003G296900 expressed protein -


Gene co-expression network
sample Sobic006G234700 Sobic006G234700 Sobic004G096400 Sobic004G096400 Sobic006G234700--Sobic004G096400 Sobic010G059500 Sobic010G059500 Sobic006G234700--Sobic010G059500 Sobic009G192300 Sobic009G192300 Sobic006G234700--Sobic009G192300 Sobic007G042400 Sobic007G042400 Sobic006G234700--Sobic007G042400 Sobic003G444800 Sobic003G444800 Sobic006G234700--Sobic003G444800 Sobic001G493200 Sobic001G493200 Sobic006G234700--Sobic001G493200 Sobic009G084900 Sobic009G084900 Sobic006G234700--Sobic009G084900 Sobic001G433800 Sobic001G433800 Sobic006G234700--Sobic001G433800 Sobic002G083500 Sobic002G083500 Sobic006G234700--Sobic002G083500 Sobic004G096400--Sobic006G234700 Sobic004G096400--Sobic009G192300 Sobic004G096400--Sobic010G059500 Sobic004G096400--Sobic001G493200 Sobic004G096400--Sobic009G084900 Sobic004G096400--Sobic001G433800 Sobic003G249600 Sobic003G249600 Sobic004G096400--Sobic003G249600 Sobic006G077200 Sobic006G077200 Sobic004G096400--Sobic006G077200 Sobic007G132100 Sobic007G132100 Sobic004G096400--Sobic007G132100 Sobic010G059500--Sobic009G084900 Sobic009G131300 Sobic009G131300 Sobic010G059500--Sobic009G131300 Sobic001G035200 Sobic001G035200 Sobic010G059500--Sobic001G035200 Sobic010G059500--Sobic004G096400 Sobic010G059500--Sobic006G234700 Sobic001G145400 Sobic001G145400 Sobic010G059500--Sobic001G145400 Sobic010G034100 Sobic010G034100 Sobic010G059500--Sobic010G034100 Sobic010G059500--Sobic006G077200 Sobic010G059500--Sobic001G493200 Sobic009G192300--Sobic004G096400 Sobic009G192300--Sobic006G234700 Sobic009G192300--Sobic010G059500 Sobic009G192300--Sobic010G034100 Sobic009G192300--Sobic009G084900 Sobic009G192300--Sobic003G444800 Sobic002G260400 Sobic002G260400 Sobic009G192300--Sobic002G260400 SobicK028600 SobicK028600 Sobic009G192300--SobicK028600 Sobic007G125000 Sobic007G125000 Sobic009G192300--Sobic007G125000 Sobic007G042400--Sobic003G444800 Sobic007G042400--Sobic006G234700 Sobic007G042400--Sobic009G084900 Sobic003G152400 Sobic003G152400 Sobic007G042400--Sobic003G152400 Sobic007G042400--Sobic010G059500 Sobic009G247400 Sobic009G247400 Sobic007G042400--Sobic009G247400 Sobic003G059750 Sobic003G059750 Sobic007G042400--Sobic003G059750 Sobic004G357100 Sobic004G357100 Sobic007G042400--Sobic004G357100 Sobic001G311500 Sobic001G311500 Sobic007G042400--Sobic001G311500 Sobic003G444800--SobicK028600 Sobic003G444800--Sobic003G059750 Sobic002G103600 Sobic002G103600 Sobic003G444800--Sobic002G103600 Sobic003G444800--Sobic004G357100 Sobic003G444800--Sobic007G042400 Sobic002G112700 Sobic002G112700 Sobic003G444800--Sobic002G112700 Sobic010G279450 Sobic010G279450 Sobic003G444800--Sobic010G279450 Sobic003G444800--Sobic006G234700 Sobic001G376200 Sobic001G376200 Sobic003G444800--Sobic001G376200 Sobic001G493200--Sobic009G084900 Sobic003G266001 Sobic003G266001 Sobic001G493200--Sobic003G266001 Sobic001G493200--Sobic010G059500 Sobic001G493200--Sobic001G433800 Sobic004G072100 Sobic004G072100 Sobic001G493200--Sobic004G072100 Sobic001G493200--Sobic004G096400 Sobic001G493200--Sobic007G132100 Sobic001G493200--Sobic006G077200 Sobic003G408600 Sobic003G408600 Sobic001G493200--Sobic003G408600 Sobic009G084900--Sobic010G059500 Sobic003G072200 Sobic003G072200 Sobic009G084900--Sobic003G072200 Sobic009G084900--Sobic001G493200 Sobic009G084900--Sobic001G433800 Sobic009G084900--Sobic009G131300 Sobic002G133300 Sobic002G133300 Sobic009G084900--Sobic002G133300 Sobic009G084900--Sobic006G077200 Sobic008G082500 Sobic008G082500 Sobic009G084900--Sobic008G082500 Sobic004G260100 Sobic004G260100 Sobic009G084900--Sobic004G260100 Sobic010G112100 Sobic010G112100 Sobic001G433800--Sobic010G112100 Sobic003G360400 Sobic003G360400 Sobic001G433800--Sobic003G360400 Sobic007G063000 Sobic007G063000 Sobic001G433800--Sobic007G063000 Sobic005G112300 Sobic005G112300 Sobic001G433800--Sobic005G112300 Sobic004G242400 Sobic004G242400 Sobic001G433800--Sobic004G242400 Sobic001G433800--Sobic002G133300 Sobic001G363500 Sobic001G363500 Sobic001G433800--Sobic001G363500 Sobic006G252900 Sobic006G252900 Sobic001G433800--Sobic006G252900 Sobic006G041600 Sobic006G041600 Sobic001G433800--Sobic006G041600 Sobic001G384300 Sobic001G384300 Sobic002G083500--Sobic001G384300 Sobic002G154000 Sobic002G154000 Sobic002G083500--Sobic002G154000 Sobic002G083500--Sobic001G433800 Sobic002G083500--Sobic001G493200 Sobic002G083500--Sobic002G260400 Sobic003G133900 Sobic003G133900 Sobic002G083500--Sobic003G133900 Sobic002G083500--Sobic006G234700 Sobic007G090430 Sobic007G090430 Sobic002G083500--Sobic007G090430 Sobic001G398800 Sobic001G398800 Sobic002G083500--Sobic001G398800
Octagon: transcription factors


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