Gene annotation
Transcriptome id Sobic.009G247400.1
Synonym Sb09g029820
Functional annotation PX domain containing protein, putative, expressed
UniProt A0A120GUT6 , A0A1B6PA83
Pfam PF00787 PF08628 PF02194
Panther DB PTHR22999 PTHR22999:SF19
NCBI CDD KOG2527; Sorting nexin SNX11 KOG2101Intermediate filament-like protein, sorting nexins, and related proteins containing PX (PhoX) domain(s)
KEGG Orthology K17925; sorting nexin-13
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G15240 : Phox-associated domain;Phox-like;Sorting nexin, C-terminal
RAP-DB (Rice) LOC_Os05g50660.1 : PX domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a044730
Brachypodium PNT70658 , PNT70659 , PNT70660
Barley HORVU7Hr1G056850.1 , HORVU3Hr1G022460.1 , HORVU5Hr1G012850.1 , HORVU4Hr1G024990.1 , HORVU6Hr1G021440.1 , HORVU7Hr1G049640.1 , HORVU1Hr1G092270.8 , HORVU1Hr1G092270.3 , HORVU1Hr1G092270.2 , HORVU1Hr1G092270.7 , HORVU1Hr1G092270.6 , HORVU1Hr1G092270.5 , HORVU1Hr1G092270.4 , HORVU1Hr1G080610.2 , HORVU1Hr1G080610.1 , HORVU5Hr1G041470.1 , HORVU1Hr1G036630.1 , HORVU7Hr1G034240.1
Wheat TraesCS1D02G430600 , TraesCS1B02G453700 , TraesCS1B02G453700 , TraesCS1A02G422400 , TraesCS1A02G422400 , TraesCS1A02G422400 , TraesCS1A02G422400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G311500 N-acetylglucosaminyl transferase component, putative, expressed K03860: PIGQ, phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
2 Sobic.010G279450 - K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
3 Sobic.009G260500 tetratricopeptide repeat containing protein, putative, expressed K14408: CSTF3, cleavage stimulation factor subunit 3
4 Sobic.004G009600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
5 Sobic.001G214600 expressed protein -
6 Sobic.001G363500 DIRP family protein, putative, expressed -
7 Sobic.001G219600 importin-beta N-terminal domain containing protein, expressed K15436: TRPO3, transportin-3
8 Sobic.002G317200 uncharacterized ACR, COG1590 family protein, expressed K15450: tRNA wybutosine-synthesizing protein 3
9 Sobic.004G314000 expressed protein -
10 Sobic.010G139000 surp module family protein, putative, expressed K13123: G patch domain-containing protein 1
11 Sobic.007G042400 HEAT repeat family protein, putative, expressed -
12 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
13 Sobic.002G103600 glycosyl transferase, group 1 domain containing protein, expressed K03857: PIGA, phosphatidylinositol N-acetylglucosaminyltransferase subunit A
14 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
15 Sobic.009G040600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
16 Sobic.003G225700 - -
17 Sobic.005G191900 transporter family protein, putative, expressed -
18 Sobic.008G028700 SET domain containing protein, expressed -
19 Sobic.009G119000 tetratricopeptide repeat containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
20 Sobic.002G275600 RFC1 - Putative clamp loader of PCNA, replication factor C subunit 1, expressed K10754: replication factor C subunit 1


Gene co-expression network
sample Sobic009G247400 Sobic009G247400 Sobic001G311500 Sobic001G311500 Sobic009G247400--Sobic001G311500 Sobic010G279450 Sobic010G279450 Sobic009G247400--Sobic010G279450 Sobic009G260500 Sobic009G260500 Sobic009G247400--Sobic009G260500 Sobic004G009600 Sobic004G009600 Sobic009G247400--Sobic004G009600 Sobic001G214600 Sobic001G214600 Sobic009G247400--Sobic001G214600 Sobic001G363500 Sobic001G363500 Sobic009G247400--Sobic001G363500 Sobic001G219600 Sobic001G219600 Sobic009G247400--Sobic001G219600 Sobic002G317200 Sobic002G317200 Sobic009G247400--Sobic002G317200 Sobic004G314000 Sobic004G314000 Sobic009G247400--Sobic004G314000 Sobic010G139000 Sobic010G139000 Sobic001G311500--Sobic010G139000 Sobic001G311500--Sobic009G247400 Sobic005G112300 Sobic005G112300 Sobic001G311500--Sobic005G112300 Sobic003G059750 Sobic003G059750 Sobic001G311500--Sobic003G059750 Sobic008G009700 Sobic008G009700 Sobic001G311500--Sobic008G009700 Sobic001G311500--Sobic004G314000 Sobic001G311500--Sobic010G279450 Sobic008G028700 Sobic008G028700 Sobic001G311500--Sobic008G028700 Sobic001G311500--Sobic001G363500 Sobic010G279450--Sobic005G112300 Sobic010G279450--Sobic010G139000 Sobic002G405800 Sobic002G405800 Sobic010G279450--Sobic002G405800 Sobic010G279450--Sobic004G314000 Sobic010G279450--Sobic003G059750 Sobic010G279450--Sobic008G028700 Sobic010G279450--Sobic001G363500 Sobic010G279450--Sobic004G009600 Sobic010G247800 Sobic010G247800 Sobic010G279450--Sobic010G247800 Sobic009G260500--Sobic001G219600 Sobic009G260500--Sobic004G009600 Sobic010G277500 Sobic010G277500 Sobic009G260500--Sobic010G277500 Sobic009G260500--Sobic008G009700 Sobic009G260500--Sobic010G139000 Sobic009G260500--Sobic008G028700 Sobic009G040600 Sobic009G040600 Sobic009G260500--Sobic009G040600 Sobic002G309600 Sobic002G309600 Sobic009G260500--Sobic002G309600 Sobic009G260500--Sobic001G311500 Sobic004G009600--Sobic009G040600 Sobic004G009600--Sobic008G028700 Sobic004G009600--Sobic009G260500 Sobic004G009600--Sobic010G279450 Sobic004G009600--Sobic002G309600 Sobic007G117400 Sobic007G117400 Sobic004G009600--Sobic007G117400 Sobic003G293200 Sobic003G293200 Sobic004G009600--Sobic003G293200 Sobic004G009600--Sobic001G363500 Sobic004G009600--Sobic010G277500 Sobic004G260100 Sobic004G260100 Sobic001G214600--Sobic004G260100 Sobic001G214600--Sobic009G247400 Sobic009G084900 Sobic009G084900 Sobic001G214600--Sobic009G084900 Sobic010G147833 Sobic010G147833 Sobic001G214600--Sobic010G147833 Sobic001G214600--Sobic002G317200 Sobic004G223600 Sobic004G223600 Sobic001G214600--Sobic004G223600 Sobic006G234700 Sobic006G234700 Sobic001G214600--Sobic006G234700 Sobic001G219900 Sobic001G219900 Sobic001G214600--Sobic001G219900 Sobic001G493200 Sobic001G493200 Sobic001G214600--Sobic001G493200 Sobic001G363500--Sobic005G112300 Sobic007G062800 Sobic007G062800 Sobic001G363500--Sobic007G062800 Sobic001G363500--Sobic010G247800 Sobic002G299700 Sobic002G299700 Sobic001G363500--Sobic002G299700 Sobic010G112100 Sobic010G112100 Sobic001G363500--Sobic010G112100 Sobic004G242400 Sobic004G242400 Sobic001G363500--Sobic004G242400 Sobic001G433800 Sobic001G433800 Sobic001G363500--Sobic001G433800 Sobic001G363500--Sobic010G279450 Sobic001G363500--Sobic010G139000 Sobic001G219600--Sobic009G260500 Sobic001G219600--Sobic002G309600 Sobic001G219600--Sobic002G317200 Sobic009G047200 Sobic009G047200 Sobic001G219600--Sobic009G047200 Sobic003G141500 Sobic003G141500 Sobic001G219600--Sobic003G141500 Sobic001G219600--Sobic010G139000 Sobic001G071400 Sobic001G071400 Sobic001G219600--Sobic001G071400 Sobic002G397500 Sobic002G397500 Sobic001G219600--Sobic002G397500 Sobic001G020000 Sobic001G020000 Sobic001G219600--Sobic001G020000 Sobic004G048800 Sobic004G048800 Sobic002G317200--Sobic004G048800 Sobic002G317200--Sobic001G219600 Sobic002G317200--Sobic004G314000 Sobic002G317200--Sobic001G433800 Sobic003G095900 Sobic003G095900 Sobic002G317200--Sobic003G095900 Sobic002G317200--Sobic004G242400 Sobic002G317200--Sobic002G397500 Sobic002G317200--Sobic005G112300 Sobic002G317200--Sobic009G260500 Sobic004G314000--Sobic010G139000 Sobic005G008800 Sobic005G008800 Sobic004G314000--Sobic005G008800 Sobic004G314000--Sobic005G112300 Sobic004G314000--Sobic010G279450 Sobic004G314000--Sobic004G242400 Sobic010G206900 Sobic010G206900 Sobic004G314000--Sobic010G206900 Sobic003G401600 Sobic003G401600 Sobic004G314000--Sobic003G401600 Sobic004G314000--Sobic002G309600 Sobic004G314000--Sobic009G040600
Octagon: transcription factors


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