Gene annotation
Transcriptome id Sobic.001G311500.1,Sobic.001G311500.2
Synonym Sb01g030350
Functional annotation N-acetylglucosaminyl transferase component, putative, expressed
UniProt A0A1B6QM66 , A0A1B6QM56
Pfam PF05024
Panther DB PTHR21329:SF3 PTHR21329 PTHR21329 PTHR21329:SF3
NCBI CDD KOG1183; N-acetylglucosaminyltransferase complex, subunit PIG-Q/GPI1, required for phosphatidylinositol biosynthesis
KEGG Orthology K03860; PIGQ, phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
Gene Ontology GO:0006506; GPI anchor biosynthetic process GO:0016021integral component of membrane GO:0017176phosphatidylinositol N-acetylglucosaminyltransferase activity GO:0017176phosphatidylinositol N-acetylglucosaminyltransferase activity GO:0016021integral component of membrane GO:0006506GPI anchor biosynthetic process


Orthologs (automatic annotation)
TAIR AT3G57170 : N-acetylglucosaminyl transferase component family protein / Gpi1 family protein
RAP-DB (Rice) LOC_Os05g22370.2 : N-acetylglucosaminyl transferase component, putative, expressed
MaizeGDB (Corn) Zm00025a039311
Brachypodium PNT74052 , PNT74051 , KQK12937 , KQK12938 , KQK12939 , KQK12941 , KQK12940
Barley HORVU5Hr1G099490.10 , HORVU5Hr1G099490.11 , HORVU5Hr1G099490.12 , HORVU5Hr1G099490.13 , HORVU5Hr1G099490.14 , HORVU5Hr1G099490.15 , HORVU5Hr1G099490.16 , HORVU5Hr1G099490.17 , HORVU5Hr1G099490.18 , HORVU5Hr1G099490.19 , HORVU5Hr1G099490.20 , HORVU5Hr1G099490.22 , HORVU5Hr1G099490.2 , HORVU5Hr1G099490.3 , HORVU5Hr1G099490.1 , HORVU5Hr1G099490.6 , HORVU5Hr1G099490.7 , HORVU5Hr1G099490.4 , HORVU5Hr1G099490.5 , HORVU5Hr1G099490.8 , HORVU5Hr1G099490.9 , HORVU5Hr1G099490.21
Wheat TraesCS5B02G415900 , TraesCS5B02G415900 , TraesCS5A02G412100 , TraesCS5A02G412100 , TraesCS5D02G421300 , TraesCS5D02G421300
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G311500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G139000 surp module family protein, putative, expressed K13123: G patch domain-containing protein 1
2 Sobic.009G247400 PX domain containing protein, putative, expressed K17925: sorting nexin-13
3 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
4 Sobic.003G059750 - K11797: PHIP, PH-interacting protein
5 Sobic.008G009700 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
6 Sobic.004G314000 expressed protein -
7 Sobic.010G279450 - K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
8 Sobic.008G028700 SET domain containing protein, expressed -
9 Sobic.001G363500 DIRP family protein, putative, expressed -
10 Sobic.007G157000 protein transport protein, putative, expressed K14006: protein transport protein SEC23
11 Sobic.005G191900 transporter family protein, putative, expressed -
12 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
13 Sobic.009G260500 tetratricopeptide repeat containing protein, putative, expressed K14408: CSTF3, cleavage stimulation factor subunit 3
14 Sobic.009G040600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
15 Sobic.004G158200 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.010G112100 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
17 Sobic.001G456900 expressed protein -
18 Sobic.009G119000 tetratricopeptide repeat containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
19 Sobic.001G222500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
20 Sobic.001G241200 protein kinase domain containing protein, expressed -


Gene co-expression network
sample Sobic001G311500 Sobic001G311500 Sobic010G139000 Sobic010G139000 Sobic001G311500--Sobic010G139000 Sobic009G247400 Sobic009G247400 Sobic001G311500--Sobic009G247400 Sobic005G112300 Sobic005G112300 Sobic001G311500--Sobic005G112300 Sobic003G059750 Sobic003G059750 Sobic001G311500--Sobic003G059750 Sobic008G009700 Sobic008G009700 Sobic001G311500--Sobic008G009700 Sobic004G314000 Sobic004G314000 Sobic001G311500--Sobic004G314000 Sobic010G279450 Sobic010G279450 Sobic001G311500--Sobic010G279450 Sobic008G028700 Sobic008G028700 Sobic001G311500--Sobic008G028700 Sobic001G363500 Sobic001G363500 Sobic001G311500--Sobic001G363500 Sobic010G139000--Sobic004G314000 Sobic010G139000--Sobic005G112300 Sobic010G139000--Sobic010G279450 Sobic010G206900 Sobic010G206900 Sobic010G139000--Sobic010G206900 Sobic010G139000--Sobic001G311500 Sobic001G036050 Sobic001G036050 Sobic010G139000--Sobic001G036050 Sobic010G112100 Sobic010G112100 Sobic010G139000--Sobic010G112100 Sobic010G010700 Sobic010G010700 Sobic010G139000--Sobic010G010700 Sobic005G008800 Sobic005G008800 Sobic010G139000--Sobic005G008800 Sobic009G247400--Sobic001G311500 Sobic009G247400--Sobic010G279450 Sobic009G260500 Sobic009G260500 Sobic009G247400--Sobic009G260500 Sobic004G009600 Sobic004G009600 Sobic009G247400--Sobic004G009600 Sobic001G214600 Sobic001G214600 Sobic009G247400--Sobic001G214600 Sobic009G247400--Sobic001G363500 Sobic001G219600 Sobic001G219600 Sobic009G247400--Sobic001G219600 Sobic002G317200 Sobic002G317200 Sobic009G247400--Sobic002G317200 Sobic009G247400--Sobic004G314000 Sobic005G112300--Sobic001G363500 Sobic007G062800 Sobic007G062800 Sobic005G112300--Sobic007G062800 Sobic005G112300--Sobic010G112100 Sobic005G112300--Sobic010G139000 Sobic007G105100 Sobic007G105100 Sobic005G112300--Sobic007G105100 Sobic001G540400 Sobic001G540400 Sobic005G112300--Sobic001G540400 Sobic005G112300--Sobic010G010700 Sobic005G112300--Sobic005G008800 Sobic002G071500 Sobic002G071500 Sobic005G112300--Sobic002G071500 Sobic007G103600 Sobic007G103600 Sobic003G059750--Sobic007G103600 Sobic005G207500 Sobic005G207500 Sobic003G059750--Sobic005G207500 Sobic003G059750--Sobic005G112300 Sobic003G059750--Sobic010G279450 Sobic002G404700 Sobic002G404700 Sobic003G059750--Sobic002G404700 Sobic003G444800 Sobic003G444800 Sobic003G059750--Sobic003G444800 Sobic003G059750--Sobic001G311500 Sobic002G405800 Sobic002G405800 Sobic003G059750--Sobic002G405800 Sobic003G059750--Sobic002G071500 Sobic002G309600 Sobic002G309600 Sobic008G009700--Sobic002G309600 Sobic008G009700--Sobic005G008800 Sobic008G009700--Sobic005G112300 Sobic007G065400 Sobic007G065400 Sobic008G009700--Sobic007G065400 Sobic008G009700--Sobic002G071500 Sobic010G002100 Sobic010G002100 Sobic008G009700--Sobic010G002100 Sobic002G153700 Sobic002G153700 Sobic008G009700--Sobic002G153700 Sobic010G065300 Sobic010G065300 Sobic008G009700--Sobic010G065300 Sobic001G241200 Sobic001G241200 Sobic008G009700--Sobic001G241200 Sobic004G314000--Sobic010G139000 Sobic004G314000--Sobic005G008800 Sobic004G314000--Sobic005G112300 Sobic004G314000--Sobic010G279450 Sobic004G242400 Sobic004G242400 Sobic004G314000--Sobic004G242400 Sobic004G314000--Sobic010G206900 Sobic003G401600 Sobic003G401600 Sobic004G314000--Sobic003G401600 Sobic004G314000--Sobic002G309600 Sobic009G040600 Sobic009G040600 Sobic004G314000--Sobic009G040600 Sobic010G279450--Sobic005G112300 Sobic010G279450--Sobic010G139000 Sobic010G279450--Sobic002G405800 Sobic010G279450--Sobic004G314000 Sobic010G279450--Sobic003G059750 Sobic010G279450--Sobic008G028700 Sobic010G279450--Sobic001G363500 Sobic010G279450--Sobic004G009600 Sobic010G247800 Sobic010G247800 Sobic010G279450--Sobic010G247800 Sobic008G028700--Sobic010G279450 Sobic008G028700--Sobic009G040600 Sobic008G028700--Sobic004G009600 Sobic004G258700 Sobic004G258700 Sobic008G028700--Sobic004G258700 Sobic008G028700--Sobic007G065400 Sobic008G028700--Sobic010G139000 Sobic002G006900 Sobic002G006900 Sobic008G028700--Sobic002G006900 Sobic002G145101 Sobic002G145101 Sobic008G028700--Sobic002G145101 Sobic008G113100 Sobic008G113100 Sobic008G028700--Sobic008G113100 Sobic001G363500--Sobic005G112300 Sobic001G363500--Sobic007G062800 Sobic001G363500--Sobic010G247800 Sobic002G299700 Sobic002G299700 Sobic001G363500--Sobic002G299700 Sobic001G363500--Sobic010G112100 Sobic001G363500--Sobic004G242400 Sobic001G433800 Sobic001G433800 Sobic001G363500--Sobic001G433800 Sobic001G363500--Sobic010G279450 Sobic001G363500--Sobic010G139000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.