Gene annotation
Transcriptome id Sobic.003G043000.3,Sobic.003G043000.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6Q187 , A0A1B6Q189
Pfam PF10513
Panther DB PTHR13793 PTHR13793:SF101
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G32620 : Enhancer of polycomb-like transcription factor protein
RAP-DB (Rice) LOC_Os01g08430.1 : expressed protein
MaizeGDB (Corn) Zm00025a010175 , Zm00025a035764 , Zm00025a001595 , Zm00025a023169
Brachypodium KQK03012
Barley HORVU3Hr1G021950.8 , HORVU3Hr1G021950.9 , HORVU3Hr1G021950.6 , HORVU3Hr1G021950.7 , HORVU3Hr1G021950.4 , HORVU3Hr1G021950.5 , HORVU3Hr1G021950.2 , HORVU3Hr1G021950.3 , HORVU3Hr1G021950.1
Wheat TraesCS3B02G137800 , TraesCS3D02G120600 , TraesCS3A02G118700 , TraesCS3A02G118700 , TraesCS3A02G118700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G265500 SET domain protein SDG117, putative, expressed -
2 Sobic.001G308400 expressed protein -
3 Sobic.003G296900 expressed protein -
4 Sobic.004G357100 expressed protein -
5 Sobic.003G241700 SET domain containing protein, expressed -
6 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
7 Sobic.K028600 expressed protein -
8 Sobic.003G163200 expressed protein K11654: SMARCA5, SNF2H, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
9 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
10 Sobic.004G053500 HEAT repeat family protein, putative, expressed K17263: CAND1, cullin-associated NEDD8-dissociated protein 1
11 Sobic.003G444800 expressed protein -
12 Sobic.006G234700 FGGY family of carbohydrate kinases, putative, expressed -
13 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -
14 Sobic.006G032300 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
15 Sobic.004G096400 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
16 Sobic.001G030000 FG-GAP repeat-containing protein, putative, expressed -
17 Sobic.004G209700 FAR1 family protein, expressed -
18 Sobic.007G018400 expressed protein -
19 Sobic.002G154000 EDM2, putative, expressed -
20 Sobic.010G000800 PHD-finger domain containing protein, expressed -


Gene co-expression network
sample Sobic003G043000 Sobic003G043000 Sobic004G265500 Sobic004G265500 Sobic003G043000--Sobic004G265500 Sobic001G308400 Sobic001G308400 Sobic003G043000--Sobic001G308400 Sobic003G296900 Sobic003G296900 Sobic003G043000--Sobic003G296900 Sobic004G357100 Sobic004G357100 Sobic003G043000--Sobic004G357100 Sobic003G241700 Sobic003G241700 Sobic003G043000--Sobic003G241700 Sobic009G228000 Sobic009G228000 Sobic003G043000--Sobic009G228000 SobicK028600 SobicK028600 Sobic003G043000--SobicK028600 Sobic003G163200 Sobic003G163200 Sobic003G043000--Sobic003G163200 Sobic002G227500 Sobic002G227500 Sobic003G043000--Sobic002G227500 Sobic004G265500--Sobic003G043000 Sobic004G265500--Sobic003G163200 Sobic004G265500--Sobic001G308400 Sobic004G265500--Sobic004G357100 Sobic010G000800 Sobic010G000800 Sobic004G265500--Sobic010G000800 Sobic002G042600 Sobic002G042600 Sobic004G265500--Sobic002G042600 Sobic004G053500 Sobic004G053500 Sobic004G265500--Sobic004G053500 Sobic004G265500--SobicK028600 Sobic004G265500--Sobic002G227500 Sobic001G308400--Sobic004G265500 Sobic001G308400--Sobic002G227500 Sobic001G308400--SobicK028600 Sobic001G308400--Sobic003G043000 Sobic010G169900 Sobic010G169900 Sobic001G308400--Sobic010G169900 Sobic006G128100 Sobic006G128100 Sobic001G308400--Sobic006G128100 Sobic001G308400--Sobic004G357100 Sobic001G156900 Sobic001G156900 Sobic001G308400--Sobic001G156900 Sobic003G394200 Sobic003G394200 Sobic001G308400--Sobic003G394200 Sobic003G296900--Sobic003G043000 Sobic001G065100 Sobic001G065100 Sobic003G296900--Sobic001G065100 Sobic003G296900--Sobic004G053500 Sobic003G308500 Sobic003G308500 Sobic003G296900--Sobic003G308500 Sobic003G296900--Sobic004G265500 Sobic003G296900--Sobic003G241700 Sobic001G255800 Sobic001G255800 Sobic003G296900--Sobic001G255800 Sobic003G296900--Sobic010G000800 Sobic004G131300 Sobic004G131300 Sobic003G296900--Sobic004G131300 Sobic004G357100--SobicK028600 Sobic003G444800 Sobic003G444800 Sobic004G357100--Sobic003G444800 Sobic002G063900 Sobic002G063900 Sobic004G357100--Sobic002G063900 Sobic003G152400 Sobic003G152400 Sobic004G357100--Sobic003G152400 Sobic004G357100--Sobic003G043000 Sobic004G357100--Sobic004G265500 Sobic004G357100--Sobic001G308400 Sobic007G042400 Sobic007G042400 Sobic004G357100--Sobic007G042400 Sobic006G234700 Sobic006G234700 Sobic004G357100--Sobic006G234700 Sobic003G241700--Sobic003G043000 Sobic003G241700--Sobic003G296900 Sobic003G241700--Sobic009G228000 Sobic004G209700 Sobic004G209700 Sobic003G241700--Sobic004G209700 Sobic003G241700--Sobic004G265500 Sobic003G241700--Sobic010G000800 Sobic003G241700--Sobic006G234700 Sobic004G213800 Sobic004G213800 Sobic003G241700--Sobic004G213800 Sobic010G034100 Sobic010G034100 Sobic003G241700--Sobic010G034100 Sobic009G107300 Sobic009G107300 Sobic009G228000--Sobic009G107300 Sobic009G228000--Sobic003G043000 Sobic004G240400 Sobic004G240400 Sobic009G228000--Sobic004G240400 Sobic009G228000--Sobic003G241700 Sobic003G363700 Sobic003G363700 Sobic009G228000--Sobic003G363700 Sobic009G228000--Sobic002G063900 Sobic003G297500 Sobic003G297500 Sobic009G228000--Sobic003G297500 Sobic009G228000--Sobic004G209700 Sobic009G228000--Sobic006G234700 SobicK028600--Sobic003G444800 SobicK028600--Sobic004G357100 SobicK028600--Sobic001G308400 Sobic002G103600 Sobic002G103600 SobicK028600--Sobic002G103600 SobicK028600--Sobic007G042400 Sobic006G116100 Sobic006G116100 SobicK028600--Sobic006G116100 SobicK028600--Sobic003G043000 SobicK028600--Sobic006G234700 SobicK028600--Sobic002G063900 Sobic003G163200--Sobic004G265500 Sobic003G163200--Sobic002G042600 Sobic003G163200--Sobic010G000800 Sobic003G163200--Sobic003G043000 Sobic002G179400 Sobic002G179400 Sobic003G163200--Sobic002G179400 Sobic010G223100 Sobic010G223100 Sobic003G163200--Sobic010G223100 Sobic002G429300 Sobic002G429300 Sobic003G163200--Sobic002G429300 Sobic006G184900 Sobic006G184900 Sobic003G163200--Sobic006G184900 Sobic004G204100 Sobic004G204100 Sobic003G163200--Sobic004G204100 Sobic002G227500--Sobic001G308400 Sobic003G021600 Sobic003G021600 Sobic002G227500--Sobic003G021600 Sobic002G227500--Sobic001G156900 Sobic002G227500--Sobic010G169900 Sobic002G227500--Sobic004G265500 Sobic002G227500--Sobic003G043000 Sobic003G405500 Sobic003G405500 Sobic002G227500--Sobic003G405500 Sobic003G181700 Sobic003G181700 Sobic002G227500--Sobic003G181700 Sobic010G059500 Sobic010G059500 Sobic002G227500--Sobic010G059500
Octagon: transcription factors


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