Gene annotation
Transcriptome id Sobic.K028600.1
Synonym
Functional annotation expressed protein
UniProt A0A1W0VQK2 , C6JSU4 , A0A120GUJ5
Pfam -
Panther DB PTHR34958 PTHR34958:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G12590 : -
RAP-DB (Rice) LOC_Os01g74310.1 : expressed protein
MaizeGDB (Corn) Zm00025a025820
Brachypodium KQK11782
Barley HORVU3Hr1G116150.7 , HORVU3Hr1G116150.6 , HORVU3Hr1G116150.5 , HORVU3Hr1G116150.4 , HORVU3Hr1G116150.3 , HORVU3Hr1G116150.2 , HORVU3Hr1G116150.9 , HORVU3Hr1G116150.8 , HORVU3Hr1G116150.19 , HORVU3Hr1G116150.17 , HORVU3Hr1G116150.16 , HORVU3Hr1G116150.15 , HORVU3Hr1G116150.14 , HORVU3Hr1G116150.13 , HORVU3Hr1G116150.12 , HORVU3Hr1G116150.11 , HORVU3Hr1G116150.10
Wheat TraesCS3B02G602200 , TraesCS3D02G537100 , TraesCS3A02G531800
Populus PNT17778 , PNT17779


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G444800 expressed protein -
2 Sobic.004G357100 expressed protein -
3 Sobic.001G308400 expressed protein -
4 Sobic.002G103600 glycosyl transferase, group 1 domain containing protein, expressed K03857: PIGA, phosphatidylinositol N-acetylglucosaminyltransferase subunit A
5 Sobic.007G042400 HEAT repeat family protein, putative, expressed -
6 Sobic.006G116100 RNA recognition motif containing protein, putative, expressed -
7 Sobic.003G043000 expressed protein -
8 Sobic.006G234700 FGGY family of carbohydrate kinases, putative, expressed -
9 Sobic.002G063900 zinc ion binding protein, putative, expressed -
10 Sobic.007G147400 - -
11 Sobic.004G265500 SET domain protein SDG117, putative, expressed -
12 Sobic.002G164300 ZOS9-03 - C2H2 zinc finger protein, expressed -
13 Sobic.001G376200 auxin response factor, putative, expressed -
14 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
15 Sobic.003G059750 - K11797: PHIP, PH-interacting protein
16 Sobic.009G192300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
17 Sobic.002G112700 glutamine-dependent NAD, putative, expressed K01950: E6.3.5.1, NADSYN1, QNS1, NAD+ synthase (glutamine-hydrolysing)
18 Sobic.004G096400 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
19 Sobic.008G153000 MATH domain containing protein, expressed -
20 Sobic.005G138300 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1


Gene co-expression network
sample SobicK028600 SobicK028600 Sobic003G444800 Sobic003G444800 SobicK028600--Sobic003G444800 Sobic004G357100 Sobic004G357100 SobicK028600--Sobic004G357100 Sobic001G308400 Sobic001G308400 SobicK028600--Sobic001G308400 Sobic002G103600 Sobic002G103600 SobicK028600--Sobic002G103600 Sobic007G042400 Sobic007G042400 SobicK028600--Sobic007G042400 Sobic006G116100 Sobic006G116100 SobicK028600--Sobic006G116100 Sobic003G043000 Sobic003G043000 SobicK028600--Sobic003G043000 Sobic006G234700 Sobic006G234700 SobicK028600--Sobic006G234700 Sobic002G063900 Sobic002G063900 SobicK028600--Sobic002G063900 Sobic003G444800--SobicK028600 Sobic003G059750 Sobic003G059750 Sobic003G444800--Sobic003G059750 Sobic003G444800--Sobic002G103600 Sobic003G444800--Sobic004G357100 Sobic003G444800--Sobic007G042400 Sobic002G112700 Sobic002G112700 Sobic003G444800--Sobic002G112700 Sobic010G279450 Sobic010G279450 Sobic003G444800--Sobic010G279450 Sobic003G444800--Sobic006G234700 Sobic001G376200 Sobic001G376200 Sobic003G444800--Sobic001G376200 Sobic004G357100--SobicK028600 Sobic004G357100--Sobic003G444800 Sobic004G357100--Sobic002G063900 Sobic003G152400 Sobic003G152400 Sobic004G357100--Sobic003G152400 Sobic004G357100--Sobic003G043000 Sobic004G265500 Sobic004G265500 Sobic004G357100--Sobic004G265500 Sobic004G357100--Sobic001G308400 Sobic004G357100--Sobic007G042400 Sobic004G357100--Sobic006G234700 Sobic001G308400--Sobic004G265500 Sobic002G227500 Sobic002G227500 Sobic001G308400--Sobic002G227500 Sobic001G308400--SobicK028600 Sobic001G308400--Sobic003G043000 Sobic010G169900 Sobic010G169900 Sobic001G308400--Sobic010G169900 Sobic006G128100 Sobic006G128100 Sobic001G308400--Sobic006G128100 Sobic001G308400--Sobic004G357100 Sobic001G156900 Sobic001G156900 Sobic001G308400--Sobic001G156900 Sobic003G394200 Sobic003G394200 Sobic001G308400--Sobic003G394200 Sobic002G103600--Sobic003G444800 Sobic005G013200 Sobic005G013200 Sobic002G103600--Sobic005G013200 Sobic002G103600--SobicK028600 Sobic002G103600--Sobic003G059750 Sobic001G311500 Sobic001G311500 Sobic002G103600--Sobic001G311500 Sobic009G247400 Sobic009G247400 Sobic002G103600--Sobic009G247400 Sobic002G408200 Sobic002G408200 Sobic002G103600--Sobic002G408200 Sobic008G028700 Sobic008G028700 Sobic002G103600--Sobic008G028700 Sobic002G103600--Sobic007G042400 Sobic007G042400--Sobic003G444800 Sobic007G042400--Sobic006G234700 Sobic009G084900 Sobic009G084900 Sobic007G042400--Sobic009G084900 Sobic007G042400--Sobic003G152400 Sobic010G059500 Sobic010G059500 Sobic007G042400--Sobic010G059500 Sobic007G042400--Sobic009G247400 Sobic007G042400--Sobic003G059750 Sobic007G042400--Sobic004G357100 Sobic007G042400--Sobic001G311500 Sobic008G153000 Sobic008G153000 Sobic006G116100--Sobic008G153000 Sobic008G149800 Sobic008G149800 Sobic006G116100--Sobic008G149800 Sobic008G173100 Sobic008G173100 Sobic006G116100--Sobic008G173100 Sobic003G160000 Sobic003G160000 Sobic006G116100--Sobic003G160000 Sobic006G116100--Sobic002G063900 Sobic002G357700 Sobic002G357700 Sobic006G116100--Sobic002G357700 Sobic003G241200 Sobic003G241200 Sobic006G116100--Sobic003G241200 Sobic009G119000 Sobic009G119000 Sobic006G116100--Sobic009G119000 Sobic003G416700 Sobic003G416700 Sobic006G116100--Sobic003G416700 Sobic003G043000--Sobic004G265500 Sobic003G043000--Sobic001G308400 Sobic003G296900 Sobic003G296900 Sobic003G043000--Sobic003G296900 Sobic003G043000--Sobic004G357100 Sobic003G241700 Sobic003G241700 Sobic003G043000--Sobic003G241700 Sobic009G228000 Sobic009G228000 Sobic003G043000--Sobic009G228000 Sobic003G043000--SobicK028600 Sobic003G163200 Sobic003G163200 Sobic003G043000--Sobic003G163200 Sobic003G043000--Sobic002G227500 Sobic004G096400 Sobic004G096400 Sobic006G234700--Sobic004G096400 Sobic006G234700--Sobic010G059500 Sobic009G192300 Sobic009G192300 Sobic006G234700--Sobic009G192300 Sobic006G234700--Sobic007G042400 Sobic006G234700--Sobic003G444800 Sobic001G493200 Sobic001G493200 Sobic006G234700--Sobic001G493200 Sobic006G234700--Sobic009G084900 Sobic001G433800 Sobic001G433800 Sobic006G234700--Sobic001G433800 Sobic002G083500 Sobic002G083500 Sobic006G234700--Sobic002G083500 Sobic002G063900--Sobic008G173100 Sobic002G063900--Sobic006G116100 Sobic002G063900--Sobic004G357100 Sobic002G260400 Sobic002G260400 Sobic002G063900--Sobic002G260400 Sobic007G090430 Sobic007G090430 Sobic002G063900--Sobic007G090430 Sobic004G246100 Sobic004G246100 Sobic002G063900--Sobic004G246100 Sobic002G278000 Sobic002G278000 Sobic002G063900--Sobic002G278000 Sobic002G063900--Sobic008G149800 Sobic002G063900--SobicK028600
Octagon: transcription factors


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