Gene annotation
Transcriptome id Sobic.002G164300.2,Sobic.002G164300.1
Synonym EMF2, Sb02g020800, AtEMF2, VEF2, CYR1
Functional annotation ZOS9-03 - C2H2 zinc finger protein, expressed
UniProt A0A1W0W4A9 , A0A1W0W4I3
Pfam PF09733
Panther DB PTHR22597 PTHR22597 PTHR22597:SF0
NCBI CDD KOG2350; Zn-finger protein joined to JAZF1 (predicted suppressor)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G51230 : VEFS-Box of polycomb protein
RAP-DB (Rice) LOC_Os09g13630.1 : ZOS9-03 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a046388 , Zm00025a008180
Brachypodium KQJ93179 , PNT63119 , PNT63118 , KQJ87520 , KQJ93186 , KQJ93190 , KQJ93189 , KQJ93188 , KQJ93183 , KQJ93182 , KQJ93181 , KQJ93180 , KQJ93187 , KQJ93178 , KQJ93185 , KQJ93184
Barley HORVU2Hr1G000010.17 , HORVU2Hr1G000010.16 , HORVU2Hr1G000010.15 , HORVU2Hr1G000010.14 , HORVU2Hr1G000010.13 , HORVU2Hr1G000010.12 , HORVU2Hr1G000010.11 , HORVU2Hr1G000010.10 , HORVU5Hr1G054730.21 , HORVU5Hr1G054730.20 , HORVU2Hr1G000010.19 , HORVU2Hr1G000010.18 , HORVU2Hr1G000010.39 , HORVU2Hr1G000010.38 , HORVU2Hr1G000010.31 , HORVU2Hr1G000010.30 , HORVU2Hr1G000010.33 , HORVU2Hr1G000010.32 , HORVU2Hr1G000010.35 , HORVU2Hr1G000010.34 , HORVU2Hr1G000010.37 , HORVU2Hr1G000010.36 , HORVU2Hr1G000010.28 , HORVU2Hr1G000010.29 , HORVU2Hr1G000010.26 , HORVU2Hr1G000010.27 , HORVU2Hr1G000010.24 , HORVU2Hr1G000010.22 , HORVU2Hr1G000010.20 , HORVU2Hr1G000010.21 , HORVU5Hr1G054730.12 , HORVU5Hr1G054730.13 , HORVU5Hr1G054730.10 , HORVU5Hr1G054730.11 , HORVU5Hr1G054730.17 , HORVU5Hr1G054730.14 , HORVU5Hr1G054730.22 , HORVU5Hr1G054730.18 , HORVU5Hr1G054730.19 , HORVU2Hr1G000010.40 , HORVU2Hr1G000010.41 , HORVU5Hr1G054730.8 , HORVU5Hr1G054730.9 , HORVU5Hr1G054730.1 , HORVU5Hr1G054730.2 , HORVU5Hr1G054730.3 , HORVU5Hr1G054730.4 , HORVU5Hr1G054730.5 , HORVU5Hr1G054730.6 , HORVU5Hr1G054730.7 , HORVU5Hr1G054730.16 , HORVU2Hr1G000010.25 , HORVU2Hr1G000010.23 , HORVU2Hr1G000010.9 , HORVU2Hr1G000010.8 , HORVU2Hr1G000010.7 , HORVU2Hr1G000010.6 , HORVU2Hr1G000010.5 , HORVU2Hr1G000010.4 , HORVU2Hr1G000010.3 , HORVU2Hr1G000010.2 , HORVU2Hr1G000010.1 , HORVU5Hr1G054730.15
Wheat TraesCSU02G075500 , TraesCS2D02G000600 , TraesCSU02G194400 , TraesCS5B02G177400 , TraesCS5D02G184200 , TraesCS5D02G184200 , TraesCS5A02G179600 , TraesCS2D02G000600 , TraesCS5B02G177400 , TraesCS2D02G000600 , TraesCS5B02G177400 , TraesCSU02G224600 , TraesCS5B02G177400 , TraesCS2A02G000100 , TraesCS2A02G000100 , TraesCS2D02G000600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
2 Sobic.002G357700 phospholipid-transporting ATPase 2, putative, expressed K01530: phospholipid-translocating ATPase
3 Sobic.K028600 expressed protein -
4 Sobic.004G357100 expressed protein -
5 Sobic.002G260400 - -
6 Sobic.007G125000 OsAPRL4 adenosine 5\'-phosphosulfate reductase-like OsAPRL4, expressed -
7 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
8 Sobic.009G049400 "SRS3(Ortholog in rice:Kitagawa et al., 2010)"(PubMedID : 31659920)@ATKINESIN-13A/KINESIN-13A, putative, expressed K10393: KIF2_24, kinesin family member 2/24
9 Sobic.009G192300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
10 Sobic.010G185400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
11 Sobic.005G138300 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
12 Sobic.007G042400 HEAT repeat family protein, putative, expressed -
13 Sobic.003G444800 expressed protein -
14 Sobic.003G398400 expressed protein -
15 Sobic.006G116100 RNA recognition motif containing protein, putative, expressed -
16 Sobic.002G370900 OsPOP16 - Putative Prolyl Oligopeptidase homologue, expressed K06889: uncharacterized protein
17 Sobic.003G189600 M16 domain containing zinc peptidase, putative, expressed -
18 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
19 Sobic.002G056701 - -
20 Sobic.009G245800 protein of unknown function DUF1296 domain containing protein, expressed -


Gene co-expression network
sample Sobic002G164300 Sobic002G164300 Sobic008G149800 Sobic008G149800 Sobic002G164300--Sobic008G149800 Sobic002G357700 Sobic002G357700 Sobic002G164300--Sobic002G357700 SobicK028600 SobicK028600 Sobic002G164300--SobicK028600 Sobic004G357100 Sobic004G357100 Sobic002G164300--Sobic004G357100 Sobic002G260400 Sobic002G260400 Sobic002G164300--Sobic002G260400 Sobic007G125000 Sobic007G125000 Sobic002G164300--Sobic007G125000 Sobic004G246100 Sobic004G246100 Sobic002G164300--Sobic004G246100 Sobic009G049400 Sobic009G049400 Sobic002G164300--Sobic009G049400 Sobic009G192300 Sobic009G192300 Sobic002G164300--Sobic009G192300 Sobic006G116100 Sobic006G116100 Sobic008G149800--Sobic006G116100 Sobic008G153000 Sobic008G153000 Sobic008G149800--Sobic008G153000 Sobic007G061700 Sobic007G061700 Sobic008G149800--Sobic007G061700 Sobic008G149800--Sobic002G357700 Sobic008G149800--Sobic002G164300 Sobic008G149800--Sobic004G246100 Sobic002G158700 Sobic002G158700 Sobic008G149800--Sobic002G158700 Sobic005G154500 Sobic005G154500 Sobic008G149800--Sobic005G154500 Sobic001G155000 Sobic001G155000 Sobic008G149800--Sobic001G155000 Sobic002G357700--Sobic008G149800 Sobic002G357700--Sobic006G116100 Sobic002G357700--Sobic005G154500 Sobic002G357700--Sobic002G164300 Sobic005G013200 Sobic005G013200 Sobic002G357700--Sobic005G013200 Sobic002G063900 Sobic002G063900 Sobic002G357700--Sobic002G063900 Sobic006G186400 Sobic006G186400 Sobic002G357700--Sobic006G186400 Sobic002G357700--Sobic008G153000 Sobic009G126600 Sobic009G126600 Sobic002G357700--Sobic009G126600 Sobic003G444800 Sobic003G444800 SobicK028600--Sobic003G444800 SobicK028600--Sobic004G357100 Sobic001G308400 Sobic001G308400 SobicK028600--Sobic001G308400 Sobic002G103600 Sobic002G103600 SobicK028600--Sobic002G103600 Sobic007G042400 Sobic007G042400 SobicK028600--Sobic007G042400 SobicK028600--Sobic006G116100 Sobic003G043000 Sobic003G043000 SobicK028600--Sobic003G043000 Sobic006G234700 Sobic006G234700 SobicK028600--Sobic006G234700 SobicK028600--Sobic002G063900 Sobic004G357100--SobicK028600 Sobic004G357100--Sobic003G444800 Sobic004G357100--Sobic002G063900 Sobic003G152400 Sobic003G152400 Sobic004G357100--Sobic003G152400 Sobic004G357100--Sobic003G043000 Sobic004G265500 Sobic004G265500 Sobic004G357100--Sobic004G265500 Sobic004G357100--Sobic001G308400 Sobic004G357100--Sobic007G042400 Sobic004G357100--Sobic006G234700 Sobic008G173100 Sobic008G173100 Sobic002G260400--Sobic008G173100 Sobic002G056701 Sobic002G056701 Sobic002G260400--Sobic002G056701 Sobic002G260400--Sobic002G063900 Sobic002G370900 Sobic002G370900 Sobic002G260400--Sobic002G370900 Sobic002G260400--Sobic006G116100 Sobic002G260400--Sobic008G153000 Sobic010G236400 Sobic010G236400 Sobic002G260400--Sobic010G236400 Sobic002G083500 Sobic002G083500 Sobic002G260400--Sobic002G083500 Sobic010G245000 Sobic010G245000 Sobic002G260400--Sobic010G245000 Sobic007G218000 Sobic007G218000 Sobic007G125000--Sobic007G218000 Sobic002G112700 Sobic002G112700 Sobic007G125000--Sobic002G112700 Sobic009G092400 Sobic009G092400 Sobic007G125000--Sobic009G092400 Sobic007G132100 Sobic007G132100 Sobic007G125000--Sobic007G132100 Sobic007G125000--Sobic009G192300 Sobic007G125000--Sobic002G164300 Sobic007G008900 Sobic007G008900 Sobic007G125000--Sobic007G008900 Sobic007G125000--Sobic009G126600 Sobic004G072100 Sobic004G072100 Sobic007G125000--Sobic004G072100 Sobic004G246100--Sobic008G149800 Sobic004G246100--Sobic008G153000 Sobic004G246100--Sobic007G061700 Sobic004G246100--Sobic002G063900 Sobic004G246100--Sobic008G173100 Sobic004G246100--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic004G246100--Sobic006G046700 Sobic009G137100 Sobic009G137100 Sobic004G246100--Sobic009G137100 Sobic004G246100--Sobic002G260400 Sobic001G369000 Sobic001G369000 Sobic009G049400--Sobic001G369000 Sobic009G229600 Sobic009G229600 Sobic009G049400--Sobic009G229600 Sobic001G426600 Sobic001G426600 Sobic009G049400--Sobic001G426600 Sobic003G394200 Sobic003G394200 Sobic009G049400--Sobic003G394200 Sobic001G335900 Sobic001G335900 Sobic009G049400--Sobic001G335900 Sobic006G163800 Sobic006G163800 Sobic009G049400--Sobic006G163800 Sobic003G189600 Sobic003G189600 Sobic009G049400--Sobic003G189600 Sobic004G039600 Sobic004G039600 Sobic009G049400--Sobic004G039600 Sobic003G240700 Sobic003G240700 Sobic009G049400--Sobic003G240700 Sobic004G096400 Sobic004G096400 Sobic009G192300--Sobic004G096400 Sobic009G192300--Sobic006G234700 Sobic010G059500 Sobic010G059500 Sobic009G192300--Sobic010G059500 Sobic010G034100 Sobic010G034100 Sobic009G192300--Sobic010G034100 Sobic009G084900 Sobic009G084900 Sobic009G192300--Sobic009G084900 Sobic009G192300--Sobic003G444800 Sobic009G192300--Sobic002G260400 Sobic009G192300--SobicK028600 Sobic009G192300--Sobic007G125000
Octagon: transcription factors


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