Gene annotation
Transcriptome id Sobic.007G125000.2,Sobic.007G125000.1
Synonym APRL4, Sb07g020170, ATAPRL4
Functional annotation OsAPRL4 adenosine 5\'-phosphosulfate reductase-like OsAPRL4, expressed
UniProt A0A1Z5RA20 , C5YKU8
Pfam PF00085
Panther DB PTHR18929 PTHR18929:SF113
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G34780 : APR-like 4
RAP-DB (Rice) LOC_Os08g31814.2,LOC_Os08g31814.1 : OsAPRL4 adenosine 5\'-phosphosulfate reductase-like OsAPRL4, expressed
MaizeGDB (Corn) Zm00025a006075
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.007G125000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -
2 Sobic.002G112700 glutamine-dependent NAD, putative, expressed K01950: E6.3.5.1, NADSYN1, QNS1, NAD+ synthase (glutamine-hydrolysing)
3 Sobic.009G092400 zinc finger, C3HC4 type family protein, expressed -
4 Sobic.007G132100 myrosinase precursor, putative, expressed -
5 Sobic.009G192300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
6 Sobic.002G164300 ZOS9-03 - C2H2 zinc finger protein, expressed -
7 Sobic.007G008900 SAC domain containing protein, putative, expressed -
8 Sobic.009G126600 cyclin-dependent kinase D-1, putative, expressed K02202: cyclin-dependent kinase 7
9 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
10 Sobic.002G260400 - -
11 Sobic.003G404500 dynamin family protein, putative, expressed K17065: dynamin 1-like protein
12 Sobic.003G143200 expressed protein -
13 Sobic.010G213500 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
14 Sobic.001G114000 expressed protein -
15 Sobic.001G014200 protein kinase domain containing protein, expressed K08829: male germ cell-associated kinase
16 Sobic.010G185400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
17 Sobic.009G124700 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
18 Sobic.006G029700 FAD dependent oxidoreductase domain containing protein, expressed K00111: glpA, glycerol-3-phosphate dehydrogenase
19 Sobic.002G408200 sec8 exocyst complex component specific domain containing protein, expressed K06111: EXOC4, exocyst complex component 4
20 Sobic.005G138300 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1


Gene co-expression network
sample Sobic007G125000 Sobic007G125000 Sobic007G218000 Sobic007G218000 Sobic007G125000--Sobic007G218000 Sobic002G112700 Sobic002G112700 Sobic007G125000--Sobic002G112700 Sobic009G092400 Sobic009G092400 Sobic007G125000--Sobic009G092400 Sobic007G132100 Sobic007G132100 Sobic007G125000--Sobic007G132100 Sobic009G192300 Sobic009G192300 Sobic007G125000--Sobic009G192300 Sobic002G164300 Sobic002G164300 Sobic007G125000--Sobic002G164300 Sobic007G008900 Sobic007G008900 Sobic007G125000--Sobic007G008900 Sobic009G126600 Sobic009G126600 Sobic007G125000--Sobic009G126600 Sobic004G072100 Sobic004G072100 Sobic007G125000--Sobic004G072100 Sobic007G218000--Sobic007G132100 Sobic007G218000--Sobic004G072100 Sobic007G218000--Sobic002G112700 Sobic006G131000 Sobic006G131000 Sobic007G218000--Sobic006G131000 Sobic009G044800 Sobic009G044800 Sobic007G218000--Sobic009G044800 Sobic010G204400 Sobic010G204400 Sobic007G218000--Sobic010G204400 Sobic006G012500 Sobic006G012500 Sobic007G218000--Sobic006G012500 Sobic009G249700 Sobic009G249700 Sobic007G218000--Sobic009G249700 Sobic007G218000--Sobic009G092400 Sobic001G114000 Sobic001G114000 Sobic002G112700--Sobic001G114000 Sobic002G112700--Sobic007G218000 Sobic002G112700--Sobic007G008900 Sobic003G059750 Sobic003G059750 Sobic002G112700--Sobic003G059750 Sobic002G405800 Sobic002G405800 Sobic002G112700--Sobic002G405800 Sobic003G444800 Sobic003G444800 Sobic002G112700--Sobic003G444800 Sobic002G112700--Sobic004G072100 Sobic007G011300 Sobic007G011300 Sobic002G112700--Sobic007G011300 Sobic009G166300 Sobic009G166300 Sobic002G112700--Sobic009G166300 Sobic009G092400--Sobic007G218000 Sobic005G160400 Sobic005G160400 Sobic009G092400--Sobic005G160400 Sobic009G092400--Sobic009G044800 Sobic009G092400--Sobic009G249700 Sobic009G092400--Sobic007G125000 Sobic004G209700 Sobic004G209700 Sobic009G092400--Sobic004G209700 Sobic002G303600 Sobic002G303600 Sobic009G092400--Sobic002G303600 Sobic006G180000 Sobic006G180000 Sobic009G092400--Sobic006G180000 Sobic009G092400--Sobic007G132100 Sobic007G132100--Sobic007G218000 Sobic007G132100--Sobic004G072100 Sobic004G039600 Sobic004G039600 Sobic007G132100--Sobic004G039600 Sobic004G178200 Sobic004G178200 Sobic007G132100--Sobic004G178200 Sobic007G132100--Sobic006G131000 Sobic007G132100--Sobic006G012500 Sobic007G132100--Sobic009G044800 Sobic008G099800 Sobic008G099800 Sobic007G132100--Sobic008G099800 Sobic007G132100--Sobic010G204400 Sobic004G096400 Sobic004G096400 Sobic009G192300--Sobic004G096400 Sobic006G234700 Sobic006G234700 Sobic009G192300--Sobic006G234700 Sobic010G059500 Sobic010G059500 Sobic009G192300--Sobic010G059500 Sobic010G034100 Sobic010G034100 Sobic009G192300--Sobic010G034100 Sobic009G084900 Sobic009G084900 Sobic009G192300--Sobic009G084900 Sobic009G192300--Sobic003G444800 Sobic002G260400 Sobic002G260400 Sobic009G192300--Sobic002G260400 SobicK028600 SobicK028600 Sobic009G192300--SobicK028600 Sobic009G192300--Sobic007G125000 Sobic008G149800 Sobic008G149800 Sobic002G164300--Sobic008G149800 Sobic002G357700 Sobic002G357700 Sobic002G164300--Sobic002G357700 Sobic002G164300--SobicK028600 Sobic004G357100 Sobic004G357100 Sobic002G164300--Sobic004G357100 Sobic002G164300--Sobic002G260400 Sobic002G164300--Sobic007G125000 Sobic004G246100 Sobic004G246100 Sobic002G164300--Sobic004G246100 Sobic009G049400 Sobic009G049400 Sobic002G164300--Sobic009G049400 Sobic002G164300--Sobic009G192300 Sobic001G451400 Sobic001G451400 Sobic007G008900--Sobic001G451400 Sobic007G008900--Sobic002G112700 Sobic007G008900--Sobic001G114000 Sobic007G008900--Sobic007G011300 Sobic007G008900--Sobic003G059750 Sobic004G067700 Sobic004G067700 Sobic007G008900--Sobic004G067700 Sobic002G408200 Sobic002G408200 Sobic007G008900--Sobic002G408200 Sobic007G217000 Sobic007G217000 Sobic007G008900--Sobic007G217000 Sobic001G155000 Sobic001G155000 Sobic007G008900--Sobic001G155000 Sobic001G222500 Sobic001G222500 Sobic009G126600--Sobic001G222500 Sobic010G185400 Sobic010G185400 Sobic009G126600--Sobic010G185400 Sobic006G165000 Sobic006G165000 Sobic009G126600--Sobic006G165000 Sobic009G126600--Sobic001G155000 Sobic009G126600--Sobic002G357700 Sobic001G407200 Sobic001G407200 Sobic009G126600--Sobic001G407200 Sobic009G126600--Sobic008G149800 Sobic003G241200 Sobic003G241200 Sobic009G126600--Sobic003G241200 Sobic005G013200 Sobic005G013200 Sobic009G126600--Sobic005G013200 Sobic004G072100--Sobic007G218000 Sobic010G053800 Sobic010G053800 Sobic004G072100--Sobic010G053800 Sobic010G275500 Sobic010G275500 Sobic004G072100--Sobic010G275500 Sobic004G072100--Sobic007G132100 Sobic004G072100--Sobic006G012500 Sobic010G069100 Sobic010G069100 Sobic004G072100--Sobic010G069100 Sobic010G116600 Sobic010G116600 Sobic004G072100--Sobic010G116600 Sobic008G047800 Sobic008G047800 Sobic004G072100--Sobic008G047800 Sobic004G072100--Sobic001G155000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.