Gene annotation
Transcriptome id Sobic.010G213500.1
Synonym Sb10g026010, UBP19
Functional annotation ubiquitin carboxyl-terminal hydrolase family protein, expressed
UniProt A0A194YKN0
Pfam PF01753 PF13423
Panther DB PTHR24006 PTHR24006:SF503
NCBI CDD KOG1865; Ubiquitin carboxyl-terminal hydrolase
KEGG Orthology K11855; ubiquitin carboxyl-terminal hydrolase 36/42
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G24640 : ubiquitin-specific protease 19
RAP-DB (Rice) LOC_Os06g44380.1 : ubiquitin carboxyl-terminal hydrolase family protein, expressed
MaizeGDB (Corn) Zm00025a042017
Brachypodium KQK16873 , KQK16875 , KQK16874
Barley HORVU7Hr1G111430.10 , HORVU7Hr1G111430.5 , HORVU7Hr1G111430.4 , HORVU7Hr1G111430.7 , HORVU7Hr1G111430.6 , HORVU7Hr1G111430.1 , HORVU7Hr1G111430.3 , HORVU7Hr1G111430.2 , HORVU7Hr1G111430.9 , HORVU7Hr1G111430.8
Wheat TraesCS7D02G485600 , TraesCS7D02G485600 , TraesCS7B02G405400 , TraesCS7B02G405400 , TraesCS7A02G498400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G079000 expressed protein -
2 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
3 Sobic.006G128100 lipase, putative, expressed -
4 Sobic.002G306100 ubiquinol-cytochrome C chaperone family protein, putative, expressed K17662: CBP3, cytochrome b pre-mRNA-processing protein 3
5 Sobic.010G169900 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
6 Sobic.001G490900 growth regulator related protein, putative, expressed -
7 Sobic.007G172700 ECT5, putative, expressed -
8 Sobic.003G398400 expressed protein -
9 Sobic.007G125000 OsAPRL4 adenosine 5\'-phosphosulfate reductase-like OsAPRL4, expressed -
10 Sobic.001G475300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
11 Sobic.K028600 expressed protein -
12 Sobic.003G444800 expressed protein -
13 Sobic.001G114200 transmembrane anterior posterior transformation 1, putative, expressed -
14 Sobic.009G249700 expressed protein -
15 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -
16 Sobic.001G376200 auxin response factor, putative, expressed -
17 Sobic.009G122500 expressed protein -
18 Sobic.007G087000 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
19 Sobic.001G308400 expressed protein -
20 Sobic.003G202600 single myb histone, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic010G213500 Sobic010G213500 Sobic002G079000 Sobic002G079000 Sobic010G213500--Sobic002G079000 Sobic002G355800 Sobic002G355800 Sobic010G213500--Sobic002G355800 Sobic006G128100 Sobic006G128100 Sobic010G213500--Sobic006G128100 Sobic002G306100 Sobic002G306100 Sobic010G213500--Sobic002G306100 Sobic010G169900 Sobic010G169900 Sobic010G213500--Sobic010G169900 Sobic001G490900 Sobic001G490900 Sobic010G213500--Sobic001G490900 Sobic007G172700 Sobic007G172700 Sobic010G213500--Sobic007G172700 Sobic003G398400 Sobic003G398400 Sobic010G213500--Sobic003G398400 Sobic007G125000 Sobic007G125000 Sobic010G213500--Sobic007G125000 Sobic007G087000 Sobic007G087000 Sobic002G079000--Sobic007G087000 Sobic002G079000--Sobic010G169900 Sobic002G079000--Sobic010G213500 Sobic004G198600 Sobic004G198600 Sobic002G079000--Sobic004G198600 Sobic002G079000--Sobic006G128100 Sobic006G250800 Sobic006G250800 Sobic002G079000--Sobic006G250800 Sobic002G079000--Sobic007G172700 Sobic001G237600 Sobic001G237600 Sobic002G079000--Sobic001G237600 Sobic002G079000--Sobic001G490900 Sobic002G355800--Sobic010G169900 Sobic002G355800--Sobic007G172700 Sobic002G355800--Sobic006G128100 Sobic002G355800--Sobic010G213500 Sobic001G389200 Sobic001G389200 Sobic002G355800--Sobic001G389200 Sobic001G475300 Sobic001G475300 Sobic002G355800--Sobic001G475300 Sobic003G058500 Sobic003G058500 Sobic002G355800--Sobic003G058500 Sobic009G162100 Sobic009G162100 Sobic002G355800--Sobic009G162100 Sobic005G177700 Sobic005G177700 Sobic002G355800--Sobic005G177700 Sobic003G394200 Sobic003G394200 Sobic006G128100--Sobic003G394200 Sobic001G308400 Sobic001G308400 Sobic006G128100--Sobic001G308400 Sobic006G128100--Sobic002G355800 Sobic006G128100--Sobic010G169900 Sobic006G128100--Sobic002G079000 Sobic006G128100--Sobic010G213500 Sobic003G189600 Sobic003G189600 Sobic006G128100--Sobic003G189600 Sobic003G346400 Sobic003G346400 Sobic006G128100--Sobic003G346400 Sobic006G210700 Sobic006G210700 Sobic006G128100--Sobic006G210700 Sobic002G306100--Sobic010G213500 Sobic002G306100--Sobic007G087000 Sobic003G365100 Sobic003G365100 Sobic002G306100--Sobic003G365100 Sobic002G306100--Sobic002G079000 Sobic003G316200 Sobic003G316200 Sobic002G306100--Sobic003G316200 Sobic002G306100--Sobic006G250800 Sobic002G306100--Sobic002G355800 Sobic003G181700 Sobic003G181700 Sobic002G306100--Sobic003G181700 Sobic002G306100--Sobic005G177700 Sobic010G169900--Sobic001G308400 Sobic010G169900--Sobic002G079000 Sobic009G128500 Sobic009G128500 Sobic010G169900--Sobic009G128500 Sobic010G169900--Sobic002G355800 Sobic002G227500 Sobic002G227500 Sobic010G169900--Sobic002G227500 Sobic010G169900--Sobic006G128100 Sobic009G194000 Sobic009G194000 Sobic010G169900--Sobic009G194000 Sobic010G169900--Sobic001G389200 Sobic010G169900--Sobic001G490900 Sobic001G490900--Sobic009G194000 Sobic006G060000 Sobic006G060000 Sobic001G490900--Sobic006G060000 Sobic001G114200 Sobic001G114200 Sobic001G490900--Sobic001G114200 Sobic001G490900--Sobic010G169900 Sobic001G490900--Sobic003G181700 Sobic001G490900--Sobic002G079000 Sobic009G122500 Sobic009G122500 Sobic001G490900--Sobic009G122500 Sobic001G490900--Sobic007G172700 Sobic001G141400 Sobic001G141400 Sobic001G490900--Sobic001G141400 Sobic007G172700--Sobic006G060000 Sobic004G350700 Sobic004G350700 Sobic007G172700--Sobic004G350700 Sobic008G152700 Sobic008G152700 Sobic007G172700--Sobic008G152700 Sobic003G190200 Sobic003G190200 Sobic007G172700--Sobic003G190200 Sobic003G394500 Sobic003G394500 Sobic007G172700--Sobic003G394500 Sobic007G172700--Sobic003G058500 Sobic007G172700--Sobic002G355800 Sobic001G424800 Sobic001G424800 Sobic007G172700--Sobic001G424800 Sobic007G030100 Sobic007G030100 Sobic007G172700--Sobic007G030100 Sobic004G218300 Sobic004G218300 Sobic003G398400--Sobic004G218300 Sobic006G130200 Sobic006G130200 Sobic003G398400--Sobic006G130200 Sobic004G084500 Sobic004G084500 Sobic003G398400--Sobic004G084500 Sobic003G398400--Sobic003G394200 Sobic002G164300 Sobic002G164300 Sobic003G398400--Sobic002G164300 Sobic003G398400--Sobic010G213500 Sobic010G074900 Sobic010G074900 Sobic003G398400--Sobic010G074900 Sobic004G122900 Sobic004G122900 Sobic003G398400--Sobic004G122900 Sobic003G407100 Sobic003G407100 Sobic003G398400--Sobic003G407100 Sobic007G218000 Sobic007G218000 Sobic007G125000--Sobic007G218000 Sobic002G112700 Sobic002G112700 Sobic007G125000--Sobic002G112700 Sobic009G092400 Sobic009G092400 Sobic007G125000--Sobic009G092400 Sobic007G132100 Sobic007G132100 Sobic007G125000--Sobic007G132100 Sobic009G192300 Sobic009G192300 Sobic007G125000--Sobic009G192300 Sobic007G125000--Sobic002G164300 Sobic007G008900 Sobic007G008900 Sobic007G125000--Sobic007G008900 Sobic009G126600 Sobic009G126600 Sobic007G125000--Sobic009G126600 Sobic004G072100 Sobic004G072100 Sobic007G125000--Sobic004G072100
Octagon: transcription factors


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