Gene annotation
Transcriptome id Sobic.001G490900.1
Synonym Sb01g045900
Functional annotation growth regulator related protein, putative, expressed
UniProt C5WWS8
Pfam PF10250
Panther DB PTHR31741 PTHR31741:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14020 : O-fucosyltransferase family protein
RAP-DB (Rice) LOC_Os03g07310.1 : growth regulator related protein, putative, expressed
MaizeGDB (Corn) Zm00025a053344 , Zm00025a000842
Brachypodium KQK23436
Barley HORVU4Hr1G074960.10 , HORVU4Hr1G074960.11 , HORVU4Hr1G074960.12 , HORVU4Hr1G074960.13 , HORVU4Hr1G074960.14 , HORVU4Hr1G074960.15 , HORVU4Hr1G074960.8 , HORVU4Hr1G074960.9 , HORVU4Hr1G074960.2 , HORVU4Hr1G074960.3 , HORVU4Hr1G074960.1 , HORVU4Hr1G074960.6 , HORVU4Hr1G074960.7 , HORVU4Hr1G074960.4 , HORVU4Hr1G074960.5
Wheat TraesCS4A02G018000 , TraesCS4A02G018000 , TraesCS4D02G284800 , TraesCS4B02G286100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G194000 Alg9-like mannosyltransferase protein, putative, expressed K05286: GPI mannosyltransferase 3
2 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
3 Sobic.001G114200 transmembrane anterior posterior transformation 1, putative, expressed -
4 Sobic.010G169900 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
5 Sobic.003G181700 GPI mannosyltransferase 2, putative, expressed K07542: GPI mannosyltransferase 2
6 Sobic.002G079000 expressed protein -
7 Sobic.009G122500 expressed protein -
8 Sobic.007G172700 ECT5, putative, expressed -
9 Sobic.001G141400 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
10 Sobic.010G213500 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
11 Sobic.004G060300 DNA binding protein, putative, expressed -
12 Sobic.004G068100 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
13 Sobic.001G308400 expressed protein -
14 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
15 Sobic.009G128500 CBS domain containing protein, expressed K16302: metal transporter CNNM
16 Sobic.006G128100 lipase, putative, expressed -
17 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
18 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
19 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
20 Sobic.003G190200 Sec1 family transport protein, putative, expressed -


Gene co-expression network
sample Sobic001G490900 Sobic001G490900 Sobic009G194000 Sobic009G194000 Sobic001G490900--Sobic009G194000 Sobic006G060000 Sobic006G060000 Sobic001G490900--Sobic006G060000 Sobic001G114200 Sobic001G114200 Sobic001G490900--Sobic001G114200 Sobic010G169900 Sobic010G169900 Sobic001G490900--Sobic010G169900 Sobic003G181700 Sobic003G181700 Sobic001G490900--Sobic003G181700 Sobic002G079000 Sobic002G079000 Sobic001G490900--Sobic002G079000 Sobic009G122500 Sobic009G122500 Sobic001G490900--Sobic009G122500 Sobic007G172700 Sobic007G172700 Sobic001G490900--Sobic007G172700 Sobic001G141400 Sobic001G141400 Sobic001G490900--Sobic001G141400 Sobic009G194000--Sobic003G181700 Sobic003G021600 Sobic003G021600 Sobic009G194000--Sobic003G021600 Sobic009G194000--Sobic001G490900 Sobic009G194000--Sobic010G169900 Sobic004G122900 Sobic004G122900 Sobic009G194000--Sobic004G122900 Sobic001G308400 Sobic001G308400 Sobic009G194000--Sobic001G308400 Sobic003G190200 Sobic003G190200 Sobic009G194000--Sobic003G190200 Sobic009G194000--Sobic006G060000 Sobic009G194000--Sobic001G141400 Sobic008G055500 Sobic008G055500 Sobic006G060000--Sobic008G055500 Sobic004G350700 Sobic004G350700 Sobic006G060000--Sobic004G350700 Sobic006G060000--Sobic007G172700 Sobic006G060000--Sobic001G114200 Sobic003G394500 Sobic003G394500 Sobic006G060000--Sobic003G394500 Sobic001G389200 Sobic001G389200 Sobic006G060000--Sobic001G389200 Sobic004G263500 Sobic004G263500 Sobic006G060000--Sobic004G263500 Sobic003G117800 Sobic003G117800 Sobic006G060000--Sobic003G117800 Sobic006G060000--Sobic001G490900 Sobic001G114200--Sobic004G350700 Sobic001G114200--Sobic006G060000 Sobic010G160300 Sobic010G160300 Sobic001G114200--Sobic010G160300 Sobic001G114200--Sobic003G117800 Sobic001G114200--Sobic003G394500 Sobic006G210700 Sobic006G210700 Sobic001G114200--Sobic006G210700 Sobic001G114200--Sobic001G490900 Sobic007G030100 Sobic007G030100 Sobic001G114200--Sobic007G030100 Sobic007G218600 Sobic007G218600 Sobic001G114200--Sobic007G218600 Sobic010G169900--Sobic001G308400 Sobic010G169900--Sobic002G079000 Sobic009G128500 Sobic009G128500 Sobic010G169900--Sobic009G128500 Sobic002G355800 Sobic002G355800 Sobic010G169900--Sobic002G355800 Sobic002G227500 Sobic002G227500 Sobic010G169900--Sobic002G227500 Sobic006G128100 Sobic006G128100 Sobic010G169900--Sobic006G128100 Sobic010G169900--Sobic009G194000 Sobic010G169900--Sobic001G389200 Sobic010G169900--Sobic001G490900 Sobic003G181700--Sobic009G194000 Sobic003G181700--Sobic003G021600 Sobic003G181700--Sobic004G122900 Sobic003G181700--Sobic001G490900 Sobic003G181700--Sobic010G169900 Sobic003G181700--Sobic002G227500 Sobic003G181700--Sobic006G060000 Sobic003G181700--Sobic009G122500 Sobic003G181700--Sobic007G172700 Sobic007G087000 Sobic007G087000 Sobic002G079000--Sobic007G087000 Sobic002G079000--Sobic010G169900 Sobic010G213500 Sobic010G213500 Sobic002G079000--Sobic010G213500 Sobic004G198600 Sobic004G198600 Sobic002G079000--Sobic004G198600 Sobic002G079000--Sobic006G128100 Sobic006G250800 Sobic006G250800 Sobic002G079000--Sobic006G250800 Sobic002G079000--Sobic007G172700 Sobic001G237600 Sobic001G237600 Sobic002G079000--Sobic001G237600 Sobic002G079000--Sobic001G490900 Sobic001G335000 Sobic001G335000 Sobic009G122500--Sobic001G335000 Sobic004G060300 Sobic004G060300 Sobic009G122500--Sobic004G060300 Sobic001G156900 Sobic001G156900 Sobic009G122500--Sobic001G156900 Sobic009G122500--Sobic004G122900 Sobic010G223400 Sobic010G223400 Sobic009G122500--Sobic010G223400 Sobic009G122500--Sobic001G308400 Sobic003G394200 Sobic003G394200 Sobic009G122500--Sobic003G394200 Sobic009G122500--Sobic001G389200 Sobic001G118000 Sobic001G118000 Sobic009G122500--Sobic001G118000 Sobic007G172700--Sobic006G060000 Sobic007G172700--Sobic004G350700 Sobic008G152700 Sobic008G152700 Sobic007G172700--Sobic008G152700 Sobic007G172700--Sobic003G190200 Sobic007G172700--Sobic003G394500 Sobic003G058500 Sobic003G058500 Sobic007G172700--Sobic003G058500 Sobic007G172700--Sobic002G355800 Sobic001G424800 Sobic001G424800 Sobic007G172700--Sobic001G424800 Sobic007G172700--Sobic007G030100 Sobic001G475300 Sobic001G475300 Sobic001G141400--Sobic001G475300 Sobic009G252300 Sobic009G252300 Sobic001G141400--Sobic009G252300 Sobic003G250400 Sobic003G250400 Sobic001G141400--Sobic003G250400 Sobic001G141400--Sobic009G194000 Sobic001G141400--Sobic003G190200 Sobic001G141400--Sobic007G172700 Sobic001G141400--Sobic001G490900 Sobic002G200000 Sobic002G200000 Sobic001G141400--Sobic002G200000 Sobic003G039900 Sobic003G039900 Sobic001G141400--Sobic003G039900
Octagon: transcription factors


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