Gene annotation
Transcriptome id Sobic.009G128500.1
Synonym Sb09g019520
Functional annotation CBS domain containing protein, expressed
UniProt C5YXL0
Pfam PF01595
Panther DB PTHR12064 PTHR12064:SF32
NCBI CDD KOG2118; Predicted membrane protein, contains two CBS domains
KEGG Orthology K16302; metal transporter CNNM
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G14240 : CBS domain-containing protein with a domain of unknown function (DUF21)
RAP-DB (Rice) LOC_Os05g32850.1 : CBS domain containing protein, expressed
MaizeGDB (Corn) Zm00025a043608 , Zm00025a037005
Brachypodium KQK06407
Barley HORVU7Hr1G108600.10 , HORVU7Hr1G108600.11 , HORVU1Hr1G062510.1 , HORVU1Hr1G062510.3 , HORVU1Hr1G062510.2 , HORVU1Hr1G062510.5 , HORVU1Hr1G062510.4 , HORVU7Hr1G108600.1 , HORVU7Hr1G108600.2 , HORVU7Hr1G108600.3 , HORVU7Hr1G108600.4 , HORVU7Hr1G108600.5 , HORVU7Hr1G108600.6 , HORVU7Hr1G108600.7 , HORVU7Hr1G108600.8 , HORVU7Hr1G108600.9
Wheat TraesCS1D02G247300 , TraesCS1D02G247300 , TraesCS7D02G466000 , TraesCS7B02G381300 , TraesCS7A02G478600 , TraesCS7D02G466000 , TraesCS7A02G478600 , TraesCS7B02G381300 , TraesCS7B02G381300 , TraesCS1B02G258300 , TraesCS7D02G466000 , TraesCS1A02G247900 , TraesCS1A02G247900
Populus -


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cDNA sequences
Sobic.009G128500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G169900 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
2 Sobic.001G308400 expressed protein -
3 Sobic.003G193500 CK1_CaseinKinase_1.2 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
4 Sobic.009G122500 expressed protein -
5 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
6 Sobic.009G116900 CW-type Zinc Finger, putative, expressed -
7 Sobic.010G223400 expressed protein -
8 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
9 Sobic.001G490900 growth regulator related protein, putative, expressed -
10 Sobic.003G409900 MYB family transcription factor, putative, expressed K12860: CDC5L, CDC5, pre-mRNA-splicing factor CDC5/CEF1
11 Sobic.001G156900 single myb histone, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.006G239400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11366: USP22_27_51, ubiquitin carboxyl-terminal hydrolase 22/27/51
13 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3
14 Sobic.003G230600 transcription factor X1, putative, expressed -
15 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
16 Sobic.001G125500 ethylene-insensitive protein, putative, expressed K14513: ethylene-insensitive protein 2
17 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
18 Sobic.003G302200 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
19 Sobic.004G254800 heat shock protein DnaJ, putative, expressed K19371: DnaJ homolog subfamily C member 25
20 Sobic.005G114500 growth regulator related protein, putative, expressed -


Gene co-expression network
sample Sobic009G128500 Sobic009G128500 Sobic010G169900 Sobic010G169900 Sobic009G128500--Sobic010G169900 Sobic001G308400 Sobic001G308400 Sobic009G128500--Sobic001G308400 Sobic003G193500 Sobic003G193500 Sobic009G128500--Sobic003G193500 Sobic009G122500 Sobic009G122500 Sobic009G128500--Sobic009G122500 Sobic002G355800 Sobic002G355800 Sobic009G128500--Sobic002G355800 Sobic009G116900 Sobic009G116900 Sobic009G128500--Sobic009G116900 Sobic010G223400 Sobic010G223400 Sobic009G128500--Sobic010G223400 Sobic003G021600 Sobic003G021600 Sobic009G128500--Sobic003G021600 Sobic001G490900 Sobic001G490900 Sobic009G128500--Sobic001G490900 Sobic010G169900--Sobic001G308400 Sobic002G079000 Sobic002G079000 Sobic010G169900--Sobic002G079000 Sobic010G169900--Sobic009G128500 Sobic010G169900--Sobic002G355800 Sobic002G227500 Sobic002G227500 Sobic010G169900--Sobic002G227500 Sobic006G128100 Sobic006G128100 Sobic010G169900--Sobic006G128100 Sobic009G194000 Sobic009G194000 Sobic010G169900--Sobic009G194000 Sobic001G389200 Sobic001G389200 Sobic010G169900--Sobic001G389200 Sobic010G169900--Sobic001G490900 Sobic004G265500 Sobic004G265500 Sobic001G308400--Sobic004G265500 Sobic001G308400--Sobic002G227500 SobicK028600 SobicK028600 Sobic001G308400--SobicK028600 Sobic003G043000 Sobic003G043000 Sobic001G308400--Sobic003G043000 Sobic001G308400--Sobic010G169900 Sobic001G308400--Sobic006G128100 Sobic004G357100 Sobic004G357100 Sobic001G308400--Sobic004G357100 Sobic001G156900 Sobic001G156900 Sobic001G308400--Sobic001G156900 Sobic003G394200 Sobic003G394200 Sobic001G308400--Sobic003G394200 Sobic003G302200 Sobic003G302200 Sobic003G193500--Sobic003G302200 Sobic003G182300 Sobic003G182300 Sobic003G193500--Sobic003G182300 Sobic003G193500--Sobic009G128500 Sobic007G042900 Sobic007G042900 Sobic003G193500--Sobic007G042900 Sobic006G039400 Sobic006G039400 Sobic003G193500--Sobic006G039400 Sobic001G019800 Sobic001G019800 Sobic003G193500--Sobic001G019800 Sobic003G193500--Sobic010G169900 Sobic003G193500--Sobic002G079000 Sobic009G077600 Sobic009G077600 Sobic003G193500--Sobic009G077600 Sobic001G335000 Sobic001G335000 Sobic009G122500--Sobic001G335000 Sobic004G060300 Sobic004G060300 Sobic009G122500--Sobic004G060300 Sobic009G122500--Sobic001G156900 Sobic004G122900 Sobic004G122900 Sobic009G122500--Sobic004G122900 Sobic009G122500--Sobic010G223400 Sobic009G122500--Sobic001G308400 Sobic009G122500--Sobic003G394200 Sobic009G122500--Sobic001G389200 Sobic001G118000 Sobic001G118000 Sobic009G122500--Sobic001G118000 Sobic002G355800--Sobic010G169900 Sobic007G172700 Sobic007G172700 Sobic002G355800--Sobic007G172700 Sobic002G355800--Sobic006G128100 Sobic010G213500 Sobic010G213500 Sobic002G355800--Sobic010G213500 Sobic002G355800--Sobic001G389200 Sobic001G475300 Sobic001G475300 Sobic002G355800--Sobic001G475300 Sobic003G058500 Sobic003G058500 Sobic002G355800--Sobic003G058500 Sobic009G162100 Sobic009G162100 Sobic002G355800--Sobic009G162100 Sobic005G177700 Sobic005G177700 Sobic002G355800--Sobic005G177700 Sobic009G116900--Sobic007G172700 Sobic003G235100 Sobic003G235100 Sobic009G116900--Sobic003G235100 Sobic001G257800 Sobic001G257800 Sobic009G116900--Sobic001G257800 Sobic006G250800 Sobic006G250800 Sobic009G116900--Sobic006G250800 Sobic004G350700 Sobic004G350700 Sobic009G116900--Sobic004G350700 Sobic001G404900 Sobic001G404900 Sobic009G116900--Sobic001G404900 Sobic008G055500 Sobic008G055500 Sobic009G116900--Sobic008G055500 Sobic008G152700 Sobic008G152700 Sobic009G116900--Sobic008G152700 Sobic002G198100 Sobic002G198100 Sobic009G116900--Sobic002G198100 Sobic010G223400--Sobic009G122500 Sobic010G223400--Sobic003G394200 Sobic005G059500 Sobic005G059500 Sobic010G223400--Sobic005G059500 Sobic001G193100 Sobic001G193100 Sobic010G223400--Sobic001G193100 Sobic010G223400--Sobic003G182300 Sobic005G114500 Sobic005G114500 Sobic010G223400--Sobic005G114500 Sobic001G474400 Sobic001G474400 Sobic010G223400--Sobic001G474400 Sobic004G078700 Sobic004G078700 Sobic010G223400--Sobic004G078700 Sobic001G012900 Sobic001G012900 Sobic010G223400--Sobic001G012900 Sobic003G021600--Sobic009G194000 Sobic003G181700 Sobic003G181700 Sobic003G021600--Sobic003G181700 Sobic003G190200 Sobic003G190200 Sobic003G021600--Sobic003G190200 Sobic003G021600--Sobic002G227500 Sobic009G040325 Sobic009G040325 Sobic003G021600--Sobic009G040325 Sobic009G040250 Sobic009G040250 Sobic003G021600--Sobic009G040250 Sobic003G394500 Sobic003G394500 Sobic003G021600--Sobic003G394500 Sobic003G021600--Sobic001G308400 Sobic001G043200 Sobic001G043200 Sobic003G021600--Sobic001G043200 Sobic001G490900--Sobic009G194000 Sobic006G060000 Sobic006G060000 Sobic001G490900--Sobic006G060000 Sobic001G114200 Sobic001G114200 Sobic001G490900--Sobic001G114200 Sobic001G490900--Sobic010G169900 Sobic001G490900--Sobic003G181700 Sobic001G490900--Sobic002G079000 Sobic001G490900--Sobic009G122500 Sobic001G490900--Sobic007G172700 Sobic001G141400 Sobic001G141400 Sobic001G490900--Sobic001G141400
Octagon: transcription factors


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