Gene annotation
Transcriptome id Sobic.003G193500.1
Synonym Sb03g025700, CKL2
Functional annotation CK1_CaseinKinase_1.2 - CK1 includes the casein kinase 1 kinases, expressed
UniProt C5XNR3
Pfam PF00069
Panther DB PTHR11909 PTHR11909:SF162
NCBI CDD KOG1163; Casein kinase (serine/threonine/tyrosine protein kinase)
KEGG Orthology K02218; CSNK1, casein kinase 1
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G26100 : casein kinase 1
RAP-DB (Rice) LOC_Os01g38950.1 : CK1_CaseinKinase_1.2 - CK1 includes the casein kinase 1 kinases, expressed
MaizeGDB (Corn) Zm00025a044746 , Zm00025a056504 , Zm00025a036809
Brachypodium -
Barley HORVU3Hr1G049480.28 , HORVU3Hr1G049480.25 , HORVU3Hr1G049480.24 , HORVU3Hr1G049480.27 , HORVU3Hr1G049480.26 , HORVU3Hr1G049480.21 , HORVU3Hr1G049480.20 , HORVU3Hr1G049480.23 , HORVU3Hr1G049480.22 , HORVU1Hr1G094920.11 , HORVU1Hr1G094920.10 , HORVU3Hr1G049480.12 , HORVU3Hr1G049480.14 , HORVU3Hr1G049480.8 , HORVU3Hr1G049480.9 , HORVU3Hr1G049480.2 , HORVU3Hr1G049480.3 , HORVU3Hr1G049480.1 , HORVU3Hr1G049480.6 , HORVU3Hr1G049480.7 , HORVU3Hr1G049480.4 , HORVU3Hr1G049480.5 , HORVU3Hr1G049480.18 , HORVU3Hr1G049480.19 , HORVU3Hr1G049480.10 , HORVU3Hr1G049480.11 , HORVU3Hr1G049480.13 , HORVU3Hr1G049480.15 , HORVU3Hr1G049480.16 , HORVU3Hr1G049480.17 , HORVU1Hr1G094920.1 , HORVU1Hr1G094920.3 , HORVU1Hr1G094920.2 , HORVU1Hr1G094920.5 , HORVU1Hr1G094920.4 , HORVU1Hr1G094920.7 , HORVU1Hr1G094920.9 , HORVU1Hr1G094920.8
Wheat TraesCS1B02G481100 , TraesCS1A02G442600 , TraesCS1D02G450400 , TraesCS1D02G450400 , TraesCS1B02G481100 , TraesCS3D02G208900 , TraesCS3D02G208900 , TraesCS3D02G208900 , TraesCS3D02G208900 , TraesCS3D02G208900 , TraesCS3D02G208900 , TraesCS3B02G238800 , TraesCS3B02G238800 , TraesCS3B02G238800 , TraesCS3B02G238800 , TraesCS3B02G238800 , TraesCS3B02G238800 , TraesCS3B02G238800 , TraesCS3A02G207000 , TraesCS3A02G207000 , TraesCS3A02G207000 , TraesCS3A02G207000
Populus PNT25100 , PNS92583 , PNT25098 , PNS92573 , PNT25099


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cDNA sequences
Sobic.003G193500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G302200 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
2 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3
3 Sobic.009G128500 CBS domain containing protein, expressed K16302: metal transporter CNNM
4 Sobic.007G042900 BSD domain-containing protein, putative, expressed K03141: TFIIH1, GTF2H1, transcription initiation factor TFIIH subunit 1
5 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
6 Sobic.001G019800 FAD binding domain containing protein, expressed K06126: ubiquinone biosynthesis monooxygenase Coq6
7 Sobic.010G169900 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
8 Sobic.002G079000 expressed protein -
9 Sobic.009G077600 glycosyl hydrolase family 47 domain contain protein, expressed K01230: MAN1A_C, mannosyl-oligosaccharide alpha-1,2-mannosidase
10 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
11 Sobic.007G087000 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
12 Sobic.001G049400 OsPP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
13 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
14 Sobic.001G399700 exonuclease, putative, expressed -
15 Sobic.001G211900 methyltransferase, putative, expressed K11437: type I protein arginine methyltransferase
16 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -
17 Sobic.010G223400 expressed protein -
18 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
19 Sobic.006G128100 lipase, putative, expressed -
20 Sobic.006G210700 potassium transporter, putative, expressed -


Gene co-expression network
sample Sobic003G193500 Sobic003G193500 Sobic003G302200 Sobic003G302200 Sobic003G193500--Sobic003G302200 Sobic003G182300 Sobic003G182300 Sobic003G193500--Sobic003G182300 Sobic009G128500 Sobic009G128500 Sobic003G193500--Sobic009G128500 Sobic007G042900 Sobic007G042900 Sobic003G193500--Sobic007G042900 Sobic006G039400 Sobic006G039400 Sobic003G193500--Sobic006G039400 Sobic001G019800 Sobic001G019800 Sobic003G193500--Sobic001G019800 Sobic010G169900 Sobic010G169900 Sobic003G193500--Sobic010G169900 Sobic002G079000 Sobic002G079000 Sobic003G193500--Sobic002G079000 Sobic009G077600 Sobic009G077600 Sobic003G193500--Sobic009G077600 Sobic003G302200--Sobic003G193500 Sobic003G302200--Sobic002G079000 Sobic001G049400 Sobic001G049400 Sobic003G302200--Sobic001G049400 Sobic003G302200--Sobic010G169900 Sobic002G355800 Sobic002G355800 Sobic003G302200--Sobic002G355800 Sobic003G202600 Sobic003G202600 Sobic003G302200--Sobic003G202600 Sobic003G302200--Sobic009G128500 Sobic004G100200 Sobic004G100200 Sobic003G302200--Sobic004G100200 Sobic006G210700 Sobic006G210700 Sobic003G302200--Sobic006G210700 Sobic010G223400 Sobic010G223400 Sobic003G182300--Sobic010G223400 Sobic003G363700 Sobic003G363700 Sobic003G182300--Sobic003G363700 Sobic001G449900 Sobic001G449900 Sobic003G182300--Sobic001G449900 Sobic001G474400 Sobic001G474400 Sobic003G182300--Sobic001G474400 Sobic003G182300--Sobic003G193500 Sobic003G182300--Sobic010G169900 Sobic001G015400 Sobic001G015400 Sobic003G182300--Sobic001G015400 Sobic003G182300--Sobic007G042900 Sobic003G181700 Sobic003G181700 Sobic003G182300--Sobic003G181700 Sobic009G128500--Sobic010G169900 Sobic001G308400 Sobic001G308400 Sobic009G128500--Sobic001G308400 Sobic009G128500--Sobic003G193500 Sobic009G122500 Sobic009G122500 Sobic009G128500--Sobic009G122500 Sobic009G128500--Sobic002G355800 Sobic009G116900 Sobic009G116900 Sobic009G128500--Sobic009G116900 Sobic009G128500--Sobic010G223400 Sobic003G021600 Sobic003G021600 Sobic009G128500--Sobic003G021600 Sobic001G490900 Sobic001G490900 Sobic009G128500--Sobic001G490900 Sobic004G345400 Sobic004G345400 Sobic007G042900--Sobic004G345400 Sobic009G249700 Sobic009G249700 Sobic007G042900--Sobic009G249700 Sobic001G042200 Sobic001G042200 Sobic007G042900--Sobic001G042200 Sobic005G110499 Sobic005G110499 Sobic007G042900--Sobic005G110499 Sobic007G042900--Sobic010G169900 Sobic007G042900--Sobic003G182300 Sobic003G394200 Sobic003G394200 Sobic007G042900--Sobic003G394200 Sobic006G139100 Sobic006G139100 Sobic007G042900--Sobic006G139100 Sobic001G005600 Sobic001G005600 Sobic007G042900--Sobic001G005600 Sobic006G093300 Sobic006G093300 Sobic006G039400--Sobic006G093300 Sobic001G405600 Sobic001G405600 Sobic006G039400--Sobic001G405600 Sobic003G296900 Sobic003G296900 Sobic006G039400--Sobic003G296900 Sobic001G237600 Sobic001G237600 Sobic006G039400--Sobic001G237600 Sobic006G039400--Sobic003G182300 Sobic010G230600 Sobic010G230600 Sobic006G039400--Sobic010G230600 Sobic007G162100 Sobic007G162100 Sobic006G039400--Sobic007G162100 Sobic007G087000 Sobic007G087000 Sobic006G039400--Sobic007G087000 Sobic001G283600 Sobic001G283600 Sobic006G039400--Sobic001G283600 Sobic007G093800 Sobic007G093800 Sobic001G019800--Sobic007G093800 Sobic002G117400 Sobic002G117400 Sobic001G019800--Sobic002G117400 Sobic001G019800--Sobic003G193500 Sobic004G252900 Sobic004G252900 Sobic001G019800--Sobic004G252900 Sobic003G264100 Sobic003G264100 Sobic001G019800--Sobic003G264100 Sobic004G092500 Sobic004G092500 Sobic001G019800--Sobic004G092500 Sobic010G092300 Sobic010G092300 Sobic001G019800--Sobic010G092300 Sobic005G160400 Sobic005G160400 Sobic001G019800--Sobic005G160400 Sobic010G265300 Sobic010G265300 Sobic001G019800--Sobic010G265300 Sobic010G169900--Sobic001G308400 Sobic010G169900--Sobic002G079000 Sobic010G169900--Sobic009G128500 Sobic010G169900--Sobic002G355800 Sobic002G227500 Sobic002G227500 Sobic010G169900--Sobic002G227500 Sobic006G128100 Sobic006G128100 Sobic010G169900--Sobic006G128100 Sobic009G194000 Sobic009G194000 Sobic010G169900--Sobic009G194000 Sobic001G389200 Sobic001G389200 Sobic010G169900--Sobic001G389200 Sobic010G169900--Sobic001G490900 Sobic002G079000--Sobic007G087000 Sobic002G079000--Sobic010G169900 Sobic010G213500 Sobic010G213500 Sobic002G079000--Sobic010G213500 Sobic004G198600 Sobic004G198600 Sobic002G079000--Sobic004G198600 Sobic002G079000--Sobic006G128100 Sobic006G250800 Sobic006G250800 Sobic002G079000--Sobic006G250800 Sobic007G172700 Sobic007G172700 Sobic002G079000--Sobic007G172700 Sobic002G079000--Sobic001G237600 Sobic002G079000--Sobic001G490900 Sobic003G209200 Sobic003G209200 Sobic009G077600--Sobic003G209200 Sobic008G055900 Sobic008G055900 Sobic009G077600--Sobic008G055900 Sobic006G260500 Sobic006G260500 Sobic009G077600--Sobic006G260500 Sobic004G207900 Sobic004G207900 Sobic009G077600--Sobic004G207900 Sobic009G077600--Sobic004G100200 Sobic006G239400 Sobic006G239400 Sobic009G077600--Sobic006G239400 Sobic007G005500 Sobic007G005500 Sobic009G077600--Sobic007G005500 Sobic003G050900 Sobic003G050900 Sobic009G077600--Sobic003G050900 Sobic010G223300 Sobic010G223300 Sobic009G077600--Sobic010G223300
Octagon: transcription factors


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