Gene annotation
Transcriptome id Sobic.001G019800.2,Sobic.001G019800.1
Synonym Sb01g001905
Functional annotation FAD binding domain containing protein, expressed
UniProt C5WT36 , A0A1Z5S418
Pfam PF01494
Panther DB PTHR13789 PTHR13789:SF240
NCBI CDD KOG3855; Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis
KEGG Orthology K06126; ubiquinone biosynthesis monooxygenase Coq6
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G24200 : FAD/NAD(P)-binding oxidoreductase family protein
RAP-DB (Rice) LOC_Os03g62260.1 : FAD binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a016366
Brachypodium KQK12237
Barley HORVU5Hr1G118710.15 , HORVU5Hr1G118710.14 , HORVU5Hr1G118710.17 , HORVU5Hr1G118710.16 , HORVU5Hr1G118710.11 , HORVU5Hr1G118710.10 , HORVU5Hr1G118710.13 , HORVU5Hr1G118710.12 , HORVU5Hr1G118710.19 , HORVU5Hr1G118710.18 , HORVU5Hr1G118710.28 , HORVU5Hr1G118710.1 , HORVU5Hr1G118710.3 , HORVU5Hr1G118710.2 , HORVU5Hr1G118710.5 , HORVU5Hr1G118710.4 , HORVU5Hr1G118710.7 , HORVU5Hr1G118710.6 , HORVU5Hr1G118710.9 , HORVU5Hr1G118710.8 , HORVU5Hr1G118780.1 , HORVU3Hr1G098220.1 , HORVU3Hr1G098220.2 , HORVU3Hr1G098220.3 , HORVU3Hr1G098220.4 , HORVU5Hr1G118710.20 , HORVU5Hr1G118710.21 , HORVU5Hr1G118710.22 , HORVU5Hr1G118710.23 , HORVU5Hr1G118710.24 , HORVU5Hr1G118710.25 , HORVU5Hr1G118710.26 , HORVU5Hr1G118710.27 , HORVU5Hr1G118710.29
Wheat TraesCS5B02G519300 , TraesCS5D02G518600 , TraesCS5D02G518600 , TraesCS5D02G522200 , TraesCS4A02G352100 , TraesCS4A02G352100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G093800 expressed protein -
2 Sobic.002G117400 expressed protein -
3 Sobic.003G193500 CK1_CaseinKinase_1.2 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
4 Sobic.004G252900 transcription factor IIA large subunit, putative, expressed K03122: TFIIA1, GTF2A1, transcription initiation factor TFIIA large subunit
5 Sobic.003G264100 - K10843: ERCC3, DNA excision repair protein ERCC-3
6 Sobic.004G092500 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
7 Sobic.010G092300 N-rich protein, putative, expressed -
8 Sobic.005G160400 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
9 Sobic.010G265300 AAA-type ATPase family protein, putative, expressed -
10 Sobic.004G266900 AAA-type ATPase family protein, putative, expressed K17681: ATPase family AAA domain-containing protein 3A/B
11 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
12 Sobic.002G358400 eukaryotic peptide chain release factor subunit 1-1, putative, expressed K03265: ETF1, peptide chain release factor subunit 1
13 Sobic.008G153500 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
14 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -
15 Sobic.009G092400 zinc finger, C3HC4 type family protein, expressed -
16 Sobic.004G040200 CGMC_MAPKCMGC_2_SLT2y_ERK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
17 Sobic.001G492200 OsFBK11 - F-box domain and kelch repeat containing protein, expressed -
18 Sobic.004G323700 zinc finger family protein, putative, expressed -
19 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3
20 Sobic.001G065100 cullin, putative, expressed K10609: cullin 4


Gene co-expression network
sample Sobic001G019800 Sobic001G019800 Sobic007G093800 Sobic007G093800 Sobic001G019800--Sobic007G093800 Sobic002G117400 Sobic002G117400 Sobic001G019800--Sobic002G117400 Sobic003G193500 Sobic003G193500 Sobic001G019800--Sobic003G193500 Sobic004G252900 Sobic004G252900 Sobic001G019800--Sobic004G252900 Sobic003G264100 Sobic003G264100 Sobic001G019800--Sobic003G264100 Sobic004G092500 Sobic004G092500 Sobic001G019800--Sobic004G092500 Sobic010G092300 Sobic010G092300 Sobic001G019800--Sobic010G092300 Sobic005G160400 Sobic005G160400 Sobic001G019800--Sobic005G160400 Sobic010G265300 Sobic010G265300 Sobic001G019800--Sobic010G265300 Sobic008G124900 Sobic008G124900 Sobic007G093800--Sobic008G124900 Sobic006G131000 Sobic006G131000 Sobic007G093800--Sobic006G131000 Sobic004G178200 Sobic004G178200 Sobic007G093800--Sobic004G178200 Sobic009G068500 Sobic009G068500 Sobic007G093800--Sobic009G068500 Sobic008G046500 Sobic008G046500 Sobic007G093800--Sobic008G046500 Sobic010G278200 Sobic010G278200 Sobic007G093800--Sobic010G278200 Sobic007G093800--Sobic003G264100 Sobic007G093800--Sobic004G092500 Sobic007G218000 Sobic007G218000 Sobic007G093800--Sobic007G218000 Sobic004G323700 Sobic004G323700 Sobic002G117400--Sobic004G323700 Sobic002G117400--Sobic007G093800 Sobic007G167900 Sobic007G167900 Sobic002G117400--Sobic007G167900 Sobic010G020400 Sobic010G020400 Sobic002G117400--Sobic010G020400 Sobic002G303600 Sobic002G303600 Sobic002G117400--Sobic002G303600 Sobic002G008800 Sobic002G008800 Sobic002G117400--Sobic002G008800 Sobic008G083200 Sobic008G083200 Sobic002G117400--Sobic008G083200 Sobic010G020300 Sobic010G020300 Sobic002G117400--Sobic010G020300 Sobic009G192000 Sobic009G192000 Sobic002G117400--Sobic009G192000 Sobic003G302200 Sobic003G302200 Sobic003G193500--Sobic003G302200 Sobic003G182300 Sobic003G182300 Sobic003G193500--Sobic003G182300 Sobic009G128500 Sobic009G128500 Sobic003G193500--Sobic009G128500 Sobic007G042900 Sobic007G042900 Sobic003G193500--Sobic007G042900 Sobic006G039400 Sobic006G039400 Sobic003G193500--Sobic006G039400 Sobic003G193500--Sobic001G019800 Sobic010G169900 Sobic010G169900 Sobic003G193500--Sobic010G169900 Sobic002G079000 Sobic002G079000 Sobic003G193500--Sobic002G079000 Sobic009G077600 Sobic009G077600 Sobic003G193500--Sobic009G077600 Sobic006G196300 Sobic006G196300 Sobic004G252900--Sobic006G196300 Sobic002G185900 Sobic002G185900 Sobic004G252900--Sobic002G185900 Sobic004G252900--Sobic003G264100 Sobic004G252900--Sobic002G117400 Sobic003G379200 Sobic003G379200 Sobic004G252900--Sobic003G379200 Sobic010G275400 Sobic010G275400 Sobic004G252900--Sobic010G275400 Sobic004G252900--Sobic006G039400 Sobic004G028100 Sobic004G028100 Sobic004G252900--Sobic004G028100 Sobic004G252900--Sobic001G019800 Sobic001G333100 Sobic001G333100 Sobic003G264100--Sobic001G333100 Sobic009G109925 Sobic009G109925 Sobic003G264100--Sobic009G109925 Sobic003G264100--Sobic006G196300 Sobic002G311100 Sobic002G311100 Sobic003G264100--Sobic002G311100 Sobic006G180000 Sobic006G180000 Sobic003G264100--Sobic006G180000 Sobic003G264100--Sobic009G068500 Sobic001G227400 Sobic001G227400 Sobic003G264100--Sobic001G227400 Sobic001G192000 Sobic001G192000 Sobic003G264100--Sobic001G192000 Sobic003G195000 Sobic003G195000 Sobic003G264100--Sobic003G195000 Sobic007G132100 Sobic007G132100 Sobic004G092500--Sobic007G132100 Sobic001G493200 Sobic001G493200 Sobic004G092500--Sobic001G493200 Sobic010G223300 Sobic010G223300 Sobic004G092500--Sobic010G223300 Sobic003G143200 Sobic003G143200 Sobic004G092500--Sobic003G143200 Sobic004G092500--Sobic010G020400 Sobic004G257100 Sobic004G257100 Sobic004G092500--Sobic004G257100 Sobic004G039600 Sobic004G039600 Sobic004G092500--Sobic004G039600 Sobic006G077200 Sobic006G077200 Sobic004G092500--Sobic006G077200 Sobic004G092500--Sobic007G167900 Sobic003G340600 Sobic003G340600 Sobic010G092300--Sobic003G340600 Sobic010G092300--Sobic005G160400 Sobic010G092300--Sobic010G265300 Sobic003G264200 Sobic003G264200 Sobic010G092300--Sobic003G264200 Sobic002G167500 Sobic002G167500 Sobic010G092300--Sobic002G167500 Sobic010G092300--Sobic001G019800 Sobic009G162600 Sobic009G162600 Sobic010G092300--Sobic009G162600 Sobic007G078500 Sobic007G078500 Sobic010G092300--Sobic007G078500 Sobic001G080700 Sobic001G080700 Sobic010G092300--Sobic001G080700 Sobic009G092400 Sobic009G092400 Sobic005G160400--Sobic009G092400 Sobic007G084100 Sobic007G084100 Sobic005G160400--Sobic007G084100 Sobic010G237900 Sobic010G237900 Sobic005G160400--Sobic010G237900 Sobic005G160400--Sobic010G092300 Sobic002G347000 Sobic002G347000 Sobic005G160400--Sobic002G347000 Sobic001G473600 Sobic001G473600 Sobic005G160400--Sobic001G473600 Sobic005G160400--Sobic010G265300 Sobic006G121300 Sobic006G121300 Sobic005G160400--Sobic006G121300 Sobic001G114500 Sobic001G114500 Sobic005G160400--Sobic001G114500 Sobic001G120500 Sobic001G120500 Sobic010G265300--Sobic001G120500 Sobic010G265300--Sobic005G160400 Sobic010G265300--Sobic010G092300 Sobic005G172500 Sobic005G172500 Sobic010G265300--Sobic005G172500 Sobic008G076800 Sobic008G076800 Sobic010G265300--Sobic008G076800 Sobic010G265300--Sobic004G092500 Sobic010G265300--Sobic007G084100 Sobic010G265300--Sobic004G257100 Sobic001G226700 Sobic001G226700 Sobic010G265300--Sobic001G226700
Octagon: transcription factors


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