Gene annotation
Transcriptome id Sobic.001G492200.1,Sobic.001G492200.2,Sobic.001G492200.3
Synonym Sb01g046015
Functional annotation OsFBK11 - F-box domain and kelch repeat containing protein, expressed
UniProt C5WWU3 , A0A1Z5SB62
Pfam PF01344
Panther DB PTHR24412 PTHR24412:SF203
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G55270 : Galactose oxidase/kelch repeat superfamily protein
RAP-DB (Rice) LOC_Os10g26990.1,LOC_Os03g07160.1 : OsFBK23 - F-box domain and kelch repeat containing protein, expressed,OsFBK11 - F-box domain and kelch repeat containing protein, expressed
MaizeGDB (Corn) Zm00025a000832
Brachypodium KQK23453 , KQK23454
Barley HORVU4Hr1G074720.1 , HORVU4Hr1G074720.2 , HORVU4Hr1G074720.3 , HORVU4Hr1G074720.4 , HORVU4Hr1G074720.5 , HORVU4Hr1G074720.6 , HORVU4Hr1G074720.7 , HORVU4Hr1G074720.8
Wheat TraesCS4D02G282200 , TraesCS4A02G020200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -
2 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3
3 Sobic.006G270600 PSF1 - Putative GINS complex subunit, expressed K10732: GINS1, GINS complex subunit 1
4 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
5 Sobic.001G395100 - K12835: DDX42, ATP-dependent RNA helicase DDX42
6 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -
7 Sobic.004G309900 cold-induced protein, putative, expressed K13174: THO complex subunit 5
8 Sobic.002G295500 expressed protein -
9 Sobic.004G155600 dnaJ domain containing protein, expressed -
10 Sobic.010G264000 expressed protein(PubMedID : 28640841)@expressed protein -
11 Sobic.004G092500 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
12 Sobic.001G428800 vacuolar sorting protein, putative, expressed -
13 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
14 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9
15 Sobic.006G014100 serine-rich 25 kDa antigen protein, putative, expressed -
16 Sobic.001G035200 ThiF family domain containing protein, putative, expressed K04532: NAE1, amyloid beta precursor protein binding protein 1
17 Sobic.003G379200 wound-responsive family protein, putative, expressed -
18 Sobic.001G358500 GA20734-PA, putative, expressed -
19 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
20 Sobic.004G266900 AAA-type ATPase family protein, putative, expressed K17681: ATPase family AAA domain-containing protein 3A/B


Gene co-expression network
sample Sobic001G492200 Sobic001G492200 Sobic003G363700 Sobic003G363700 Sobic001G492200--Sobic003G363700 Sobic003G182300 Sobic003G182300 Sobic001G492200--Sobic003G182300 Sobic006G270600 Sobic006G270600 Sobic001G492200--Sobic006G270600 Sobic008G103300 Sobic008G103300 Sobic001G492200--Sobic008G103300 Sobic001G395100 Sobic001G395100 Sobic001G492200--Sobic001G395100 Sobic001G449900 Sobic001G449900 Sobic001G492200--Sobic001G449900 Sobic004G309900 Sobic004G309900 Sobic001G492200--Sobic004G309900 Sobic002G295500 Sobic002G295500 Sobic001G492200--Sobic002G295500 Sobic004G155600 Sobic004G155600 Sobic001G492200--Sobic004G155600 Sobic003G379200 Sobic003G379200 Sobic003G363700--Sobic003G379200 Sobic001G237600 Sobic001G237600 Sobic003G363700--Sobic001G237600 Sobic004G265500 Sobic004G265500 Sobic003G363700--Sobic004G265500 Sobic002G371700 Sobic002G371700 Sobic003G363700--Sobic002G371700 Sobic009G228000 Sobic009G228000 Sobic003G363700--Sobic009G228000 Sobic002G374300 Sobic002G374300 Sobic003G363700--Sobic002G374300 Sobic003G043000 Sobic003G043000 Sobic003G363700--Sobic003G043000 Sobic010G000800 Sobic010G000800 Sobic003G363700--Sobic010G000800 Sobic003G363700--Sobic003G182300 Sobic010G223400 Sobic010G223400 Sobic003G182300--Sobic010G223400 Sobic003G182300--Sobic003G363700 Sobic003G182300--Sobic001G449900 Sobic001G474400 Sobic001G474400 Sobic003G182300--Sobic001G474400 Sobic003G193500 Sobic003G193500 Sobic003G182300--Sobic003G193500 Sobic010G169900 Sobic010G169900 Sobic003G182300--Sobic010G169900 Sobic001G015400 Sobic001G015400 Sobic003G182300--Sobic001G015400 Sobic007G042900 Sobic007G042900 Sobic003G182300--Sobic007G042900 Sobic003G181700 Sobic003G181700 Sobic003G182300--Sobic003G181700 Sobic006G270600--Sobic004G155600 Sobic003G132000 Sobic003G132000 Sobic006G270600--Sobic003G132000 Sobic001G259000 Sobic001G259000 Sobic006G270600--Sobic001G259000 Sobic010G264000 Sobic010G264000 Sobic006G270600--Sobic010G264000 Sobic006G270600--Sobic002G295500 Sobic009G131900 Sobic009G131900 Sobic006G270600--Sobic009G131900 Sobic006G014100 Sobic006G014100 Sobic006G270600--Sobic006G014100 Sobic006G270600--Sobic001G492200 Sobic001G114500 Sobic001G114500 Sobic006G270600--Sobic001G114500 Sobic008G055900 Sobic008G055900 Sobic008G103300--Sobic008G055900 Sobic008G103300--Sobic002G371700 Sobic003G046300 Sobic003G046300 Sobic008G103300--Sobic003G046300 Sobic008G103300--Sobic003G132000 Sobic005G074500 Sobic005G074500 Sobic008G103300--Sobic005G074500 Sobic008G103300--Sobic001G114500 Sobic001G145400 Sobic001G145400 Sobic008G103300--Sobic001G145400 Sobic006G200700 Sobic006G200700 Sobic008G103300--Sobic006G200700 Sobic008G103300--Sobic002G295500 Sobic006G121300 Sobic006G121300 Sobic001G395100--Sobic006G121300 Sobic002G034600 Sobic002G034600 Sobic001G395100--Sobic002G034600 Sobic007G191700 Sobic007G191700 Sobic001G395100--Sobic007G191700 Sobic001G473600 Sobic001G473600 Sobic001G395100--Sobic001G473600 Sobic001G469800 Sobic001G469800 Sobic001G395100--Sobic001G469800 Sobic007G027700 Sobic007G027700 Sobic001G395100--Sobic007G027700 Sobic007G056500 Sobic007G056500 Sobic001G395100--Sobic007G056500 Sobic006G248500 Sobic006G248500 Sobic001G395100--Sobic006G248500 Sobic001G042200 Sobic001G042200 Sobic001G395100--Sobic001G042200 Sobic010G223300 Sobic010G223300 Sobic001G449900--Sobic010G223300 Sobic002G020700 Sobic002G020700 Sobic001G449900--Sobic002G020700 Sobic008G085700 Sobic008G085700 Sobic001G449900--Sobic008G085700 Sobic001G301200 Sobic001G301200 Sobic001G449900--Sobic001G301200 Sobic003G189600 Sobic003G189600 Sobic001G449900--Sobic003G189600 Sobic001G428800 Sobic001G428800 Sobic001G449900--Sobic001G428800 Sobic003G029600 Sobic003G029600 Sobic001G449900--Sobic003G029600 Sobic010G020400 Sobic010G020400 Sobic001G449900--Sobic010G020400 Sobic007G005500 Sobic007G005500 Sobic001G449900--Sobic007G005500 Sobic003G133900 Sobic003G133900 Sobic004G309900--Sobic003G133900 Sobic007G183900 Sobic007G183900 Sobic004G309900--Sobic007G183900 Sobic003G062300 Sobic003G062300 Sobic004G309900--Sobic003G062300 Sobic006G077200 Sobic006G077200 Sobic004G309900--Sobic006G077200 Sobic004G096400 Sobic004G096400 Sobic004G309900--Sobic004G096400 Sobic002G366400 Sobic002G366400 Sobic004G309900--Sobic002G366400 Sobic006G210000 Sobic006G210000 Sobic004G309900--Sobic006G210000 Sobic003G416700 Sobic003G416700 Sobic004G309900--Sobic003G416700 Sobic001G008200 Sobic001G008200 Sobic004G309900--Sobic001G008200 Sobic003G104000 Sobic003G104000 Sobic002G295500--Sobic003G104000 Sobic009G044800 Sobic009G044800 Sobic002G295500--Sobic009G044800 Sobic002G295500--Sobic003G416700 Sobic006G224800 Sobic006G224800 Sobic002G295500--Sobic006G224800 Sobic004G353000 Sobic004G353000 Sobic002G295500--Sobic004G353000 Sobic002G295500--Sobic007G183900 Sobic006G240100 Sobic006G240100 Sobic002G295500--Sobic006G240100 Sobic007G132100 Sobic007G132100 Sobic002G295500--Sobic007G132100 Sobic002G295500--Sobic006G200700 Sobic004G155600--Sobic006G014100 Sobic004G155600--Sobic006G270600 Sobic006G080400 Sobic006G080400 Sobic004G155600--Sobic006G080400 Sobic004G355800 Sobic004G355800 Sobic004G155600--Sobic004G355800 Sobic002G425500 Sobic002G425500 Sobic004G155600--Sobic002G425500 Sobic006G118700 Sobic006G118700 Sobic004G155600--Sobic006G118700 Sobic004G155600--Sobic006G210000 Sobic002G145800 Sobic002G145800 Sobic004G155600--Sobic002G145800 Sobic001G002600 Sobic001G002600 Sobic004G155600--Sobic001G002600
Octagon: transcription factors


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