Gene annotation
Transcriptome id Sobic.008G129600.4,Sobic.008G129600.3,Sobic.008G129600.5
Synonym Sb08g018190
Functional annotation glucosidase II beta subunit-like domain containing protein, expressed
UniProt A0A1B6PDE0
Pfam PF07915
Panther DB PTHR15414
NCBI CDD -
KEGG Orthology K10088; protein OS-9
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G35080 : -
RAP-DB (Rice) LOC_Os06g43710.1 : glucosidase II beta subunit-like domain containing protein, expressed
MaizeGDB (Corn) Zm00025a004142 , Zm00025a025471
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G129600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
2 Sobic.007G177300 kinetochore protein, putative, expressed K11547: NDC80, HEC1, kinetochore protein NDC80
3 Sobic.006G056200 transport protein particle component, Bet3, domain containing protein, expressed -
4 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
5 Sobic.010G264000 expressed protein(PubMedID : 28640841)@expressed protein -
6 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
7 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -
8 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3
9 Sobic.006G270600 PSF1 - Putative GINS complex subunit, expressed K10732: GINS1, GINS complex subunit 1
10 Sobic.001G061200 25.3 kDa vesicle transport protein, putative, expressed K08517: vesicle transport protein SEC22
11 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
12 Sobic.001G358500 GA20734-PA, putative, expressed -
13 Sobic.004G207900 nucleotide-sugar transporter family protein, putative, expressed -
14 Sobic.002G075900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDasubunit precursor, putative, expressed K12670: oligosaccharyltransferase complex subunit beta
15 Sobic.009G131900 - K18177: cytochrome c oxidase assembly factor 4
16 Sobic.008G145100 glycosyl transferase, group 1 domain containing protein, expressed K03844: alpha-1,2-mannosyltransferase
17 Sobic.009G077600 glycosyl hydrolase family 47 domain contain protein, expressed K01230: MAN1A_C, mannosyl-oligosaccharide alpha-1,2-mannosidase
18 Sobic.003G395300 TBC domain containing protein, expressed -
19 Sobic.001G492200 OsFBK11 - F-box domain and kelch repeat containing protein, expressed -
20 Sobic.001G023100 ACBP4, putative, expressed -


Gene co-expression network
sample Sobic008G129600 Sobic008G129600 Sobic008G055900 Sobic008G055900 Sobic008G129600--Sobic008G055900 Sobic007G177300 Sobic007G177300 Sobic008G129600--Sobic007G177300 Sobic006G056200 Sobic006G056200 Sobic008G129600--Sobic006G056200 Sobic008G103300 Sobic008G103300 Sobic008G129600--Sobic008G103300 Sobic010G264000 Sobic010G264000 Sobic008G129600--Sobic010G264000 Sobic001G467100 Sobic001G467100 Sobic008G129600--Sobic001G467100 Sobic001G449900 Sobic001G449900 Sobic008G129600--Sobic001G449900 Sobic003G182300 Sobic003G182300 Sobic008G129600--Sobic003G182300 Sobic006G270600 Sobic006G270600 Sobic008G129600--Sobic006G270600 Sobic002G020700 Sobic002G020700 Sobic008G055900--Sobic002G020700 Sobic010G223300 Sobic010G223300 Sobic008G055900--Sobic010G223300 Sobic008G055900--Sobic008G103300 Sobic010G020400 Sobic010G020400 Sobic008G055900--Sobic010G020400 Sobic006G136400 Sobic006G136400 Sobic008G055900--Sobic006G136400 Sobic001G447300 Sobic001G447300 Sobic008G055900--Sobic001G447300 Sobic008G085700 Sobic008G085700 Sobic008G055900--Sobic008G085700 Sobic008G055900--Sobic006G056200 Sobic008G055900--Sobic008G129600 Sobic007G177300--Sobic008G129600 Sobic007G177300--Sobic001G467100 Sobic009G231700 Sobic009G231700 Sobic007G177300--Sobic009G231700 Sobic001G382600 Sobic001G382600 Sobic007G177300--Sobic001G382600 Sobic007G177300--Sobic010G020400 Sobic002G394600 Sobic002G394600 Sobic007G177300--Sobic002G394600 Sobic009G077600 Sobic009G077600 Sobic007G177300--Sobic009G077600 Sobic002G014400 Sobic002G014400 Sobic007G177300--Sobic002G014400 Sobic007G177300--Sobic008G103300 Sobic004G039600 Sobic004G039600 Sobic006G056200--Sobic004G039600 Sobic006G056200--Sobic008G055900 Sobic006G056200--Sobic008G129600 Sobic003G099300 Sobic003G099300 Sobic006G056200--Sobic003G099300 Sobic009G226400 Sobic009G226400 Sobic006G056200--Sobic009G226400 Sobic006G056200--Sobic008G103300 Sobic001G369000 Sobic001G369000 Sobic006G056200--Sobic001G369000 SobicK004100 SobicK004100 Sobic006G056200--SobicK004100 Sobic002G029300 Sobic002G029300 Sobic006G056200--Sobic002G029300 Sobic008G103300--Sobic008G055900 Sobic002G371700 Sobic002G371700 Sobic008G103300--Sobic002G371700 Sobic003G046300 Sobic003G046300 Sobic008G103300--Sobic003G046300 Sobic003G132000 Sobic003G132000 Sobic008G103300--Sobic003G132000 Sobic005G074500 Sobic005G074500 Sobic008G103300--Sobic005G074500 Sobic001G114500 Sobic001G114500 Sobic008G103300--Sobic001G114500 Sobic001G145400 Sobic001G145400 Sobic008G103300--Sobic001G145400 Sobic006G200700 Sobic006G200700 Sobic008G103300--Sobic006G200700 Sobic002G295500 Sobic002G295500 Sobic008G103300--Sobic002G295500 Sobic010G264000--Sobic006G270600 Sobic010G264000--Sobic008G129600 Sobic010G264000--Sobic008G103300 Sobic001G042200 Sobic001G042200 Sobic010G264000--Sobic001G042200 Sobic010G235200 Sobic010G235200 Sobic010G264000--Sobic010G235200 Sobic003G363700 Sobic003G363700 Sobic010G264000--Sobic003G363700 Sobic010G264000--Sobic003G182300 Sobic001G492200 Sobic001G492200 Sobic010G264000--Sobic001G492200 Sobic006G142400 Sobic006G142400 Sobic010G264000--Sobic006G142400 Sobic004G208500 Sobic004G208500 Sobic001G467100--Sobic004G208500 Sobic010G172400 Sobic010G172400 Sobic001G467100--Sobic010G172400 Sobic001G474400 Sobic001G474400 Sobic001G467100--Sobic001G474400 Sobic001G099900 Sobic001G099900 Sobic001G467100--Sobic001G099900 Sobic003G222700 Sobic003G222700 Sobic001G467100--Sobic003G222700 Sobic007G145400 Sobic007G145400 Sobic001G467100--Sobic007G145400 Sobic005G114500 Sobic005G114500 Sobic001G467100--Sobic005G114500 Sobic001G161700 Sobic001G161700 Sobic001G467100--Sobic001G161700 Sobic005G110499 Sobic005G110499 Sobic001G467100--Sobic005G110499 Sobic001G449900--Sobic010G223300 Sobic001G449900--Sobic002G020700 Sobic001G449900--Sobic008G085700 Sobic001G301200 Sobic001G301200 Sobic001G449900--Sobic001G301200 Sobic003G189600 Sobic003G189600 Sobic001G449900--Sobic003G189600 Sobic001G428800 Sobic001G428800 Sobic001G449900--Sobic001G428800 Sobic003G029600 Sobic003G029600 Sobic001G449900--Sobic003G029600 Sobic001G449900--Sobic010G020400 Sobic007G005500 Sobic007G005500 Sobic001G449900--Sobic007G005500 Sobic010G223400 Sobic010G223400 Sobic003G182300--Sobic010G223400 Sobic003G182300--Sobic003G363700 Sobic003G182300--Sobic001G449900 Sobic003G182300--Sobic001G474400 Sobic003G193500 Sobic003G193500 Sobic003G182300--Sobic003G193500 Sobic010G169900 Sobic010G169900 Sobic003G182300--Sobic010G169900 Sobic001G015400 Sobic001G015400 Sobic003G182300--Sobic001G015400 Sobic007G042900 Sobic007G042900 Sobic003G182300--Sobic007G042900 Sobic003G181700 Sobic003G181700 Sobic003G182300--Sobic003G181700 Sobic004G155600 Sobic004G155600 Sobic006G270600--Sobic004G155600 Sobic006G270600--Sobic003G132000 Sobic001G259000 Sobic001G259000 Sobic006G270600--Sobic001G259000 Sobic006G270600--Sobic010G264000 Sobic006G270600--Sobic002G295500 Sobic009G131900 Sobic009G131900 Sobic006G270600--Sobic009G131900 Sobic006G014100 Sobic006G014100 Sobic006G270600--Sobic006G014100 Sobic006G270600--Sobic001G492200 Sobic006G270600--Sobic001G114500
Octagon: transcription factors


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