Gene annotation
Transcriptome id Sobic.003G395300.5,Sobic.003G395300.6,Sobic.003G395300.2,Sobic.003G395300.1,Sobic.003G395300.4,Sobic.003G395300.3
Synonym Sb03g043240
Functional annotation TBC domain containing protein, expressed
UniProt A0A1W0W114 , C5XFI8 , A0A1B6Q7R6 , A0A1W0W119 , A0A1W0W122
Pfam PF00566
Panther DB PTHR22957:SF319 PTHR22957 PTHR22957 PTHR22957:SF319
NCBI CDD KOG4567; GTPase-activating protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G13730 : Ypt/Rab-GAP domain of gyp1p superfamily protein
RAP-DB (Rice) LOC_Os01g68010.1,LOC_Os01g68010.2 : TBC domain containing protein, expressed
MaizeGDB (Corn) Zm00025a026358 , Zm00025a039422
Brachypodium KQK11104
Barley HORVU3Hr1G091910.5 , HORVU3Hr1G091910.4 , HORVU3Hr1G091910.7 , HORVU3Hr1G091910.2 , HORVU3Hr1G091910.6 , HORVU3Hr1G091910.9 , HORVU3Hr1G091910.8 , HORVU3Hr1G091910.3 , HORVU3Hr1G091910.1 , HORVU3Hr1G091910.11 , HORVU3Hr1G091910.10 , HORVU3Hr1G091910.13 , HORVU3Hr1G091910.12 , HORVU3Hr1G091910.14
Wheat TraesCS3B02G447600 , TraesCS3B02G447600 , TraesCS3A02G413300 , TraesCS3D02G407800 , TraesCS3D02G407800
Populus -


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cDNA sequences
Sobic.003G395300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G207500 ZOS10-06 - C2H2 zinc finger protein, expressed K15685: E3 ubiquitin-protein ligase Hakai
2 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
3 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
4 Sobic.001G358500 GA20734-PA, putative, expressed -
5 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9
6 Sobic.002G160700 WD domain, G-beta repeat domain containing protein, expressed K12880: THO complex subunit 3
7 Sobic.002G131400 GPI mannosyltransferase 1, putative, expressed K05284: GPI mannosyltransferase 1 subunit M
8 Sobic.010G179700 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
9 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3
10 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -
11 Sobic.003G202100 Uncharacterized ACR, COG1565 containing protein, putative, expressed K18164: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
12 Sobic.001G492200 OsFBK11 - F-box domain and kelch repeat containing protein, expressed -
13 Sobic.001G211900 methyltransferase, putative, expressed K11437: type I protein arginine methyltransferase
14 Sobic.007G177300 kinetochore protein, putative, expressed K11547: NDC80, HEC1, kinetochore protein NDC80
15 Sobic.001G428800 vacuolar sorting protein, putative, expressed -
16 Sobic.010G020400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
17 Sobic.010G223400 expressed protein -
18 Sobic.001G151600 OsRhmbd9 - Putative Rhomboid homologue, expressed -
19 Sobic.003G193500 CK1_CaseinKinase_1.2 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
20 Sobic.001G049400 OsPP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit


Gene co-expression network
sample Sobic003G395300 Sobic003G395300 Sobic001G207500 Sobic001G207500 Sobic003G395300--Sobic001G207500 Sobic001G467100 Sobic001G467100 Sobic003G395300--Sobic001G467100 Sobic006G039400 Sobic006G039400 Sobic003G395300--Sobic006G039400 Sobic001G358500 Sobic001G358500 Sobic003G395300--Sobic001G358500 Sobic008G129600 Sobic008G129600 Sobic003G395300--Sobic008G129600 Sobic002G160700 Sobic002G160700 Sobic003G395300--Sobic002G160700 Sobic002G131400 Sobic002G131400 Sobic003G395300--Sobic002G131400 Sobic010G179700 Sobic010G179700 Sobic003G395300--Sobic010G179700 Sobic003G182300 Sobic003G182300 Sobic003G395300--Sobic003G182300 Sobic001G341500 Sobic001G341500 Sobic001G207500--Sobic001G341500 Sobic001G207500--Sobic003G395300 Sobic007G105900 Sobic007G105900 Sobic001G207500--Sobic007G105900 Sobic001G405600 Sobic001G405600 Sobic001G207500--Sobic001G405600 Sobic007G167900 Sobic007G167900 Sobic001G207500--Sobic007G167900 Sobic003G273400 Sobic003G273400 Sobic001G207500--Sobic003G273400 Sobic001G207500--Sobic006G039400 Sobic001G207500--Sobic001G358500 Sobic002G347000 Sobic002G347000 Sobic001G207500--Sobic002G347000 Sobic004G208500 Sobic004G208500 Sobic001G467100--Sobic004G208500 Sobic010G172400 Sobic010G172400 Sobic001G467100--Sobic010G172400 Sobic001G474400 Sobic001G474400 Sobic001G467100--Sobic001G474400 Sobic001G099900 Sobic001G099900 Sobic001G467100--Sobic001G099900 Sobic003G222700 Sobic003G222700 Sobic001G467100--Sobic003G222700 Sobic007G145400 Sobic007G145400 Sobic001G467100--Sobic007G145400 Sobic005G114500 Sobic005G114500 Sobic001G467100--Sobic005G114500 Sobic001G161700 Sobic001G161700 Sobic001G467100--Sobic001G161700 Sobic005G110499 Sobic005G110499 Sobic001G467100--Sobic005G110499 Sobic006G093300 Sobic006G093300 Sobic006G039400--Sobic006G093300 Sobic006G039400--Sobic001G405600 Sobic003G296900 Sobic003G296900 Sobic006G039400--Sobic003G296900 Sobic001G237600 Sobic001G237600 Sobic006G039400--Sobic001G237600 Sobic006G039400--Sobic003G182300 Sobic010G230600 Sobic010G230600 Sobic006G039400--Sobic010G230600 Sobic007G162100 Sobic007G162100 Sobic006G039400--Sobic007G162100 Sobic007G087000 Sobic007G087000 Sobic006G039400--Sobic007G087000 Sobic001G283600 Sobic001G283600 Sobic006G039400--Sobic001G283600 Sobic001G428800 Sobic001G428800 Sobic001G358500--Sobic001G428800 Sobic010G192600 Sobic010G192600 Sobic001G358500--Sobic010G192600 Sobic008G018500 Sobic008G018500 Sobic001G358500--Sobic008G018500 Sobic008G085700 Sobic008G085700 Sobic001G358500--Sobic008G085700 Sobic001G358500--Sobic001G467100 Sobic001G358500--Sobic003G182300 Sobic001G358500--Sobic006G039400 Sobic001G049400 Sobic001G049400 Sobic001G358500--Sobic001G049400 Sobic001G211900 Sobic001G211900 Sobic001G358500--Sobic001G211900 Sobic008G055900 Sobic008G055900 Sobic008G129600--Sobic008G055900 Sobic007G177300 Sobic007G177300 Sobic008G129600--Sobic007G177300 Sobic006G056200 Sobic006G056200 Sobic008G129600--Sobic006G056200 Sobic008G103300 Sobic008G103300 Sobic008G129600--Sobic008G103300 Sobic010G264000 Sobic010G264000 Sobic008G129600--Sobic010G264000 Sobic008G129600--Sobic001G467100 Sobic001G449900 Sobic001G449900 Sobic008G129600--Sobic001G449900 Sobic008G129600--Sobic003G182300 Sobic006G270600 Sobic006G270600 Sobic008G129600--Sobic006G270600 Sobic001G151600 Sobic001G151600 Sobic002G160700--Sobic001G151600 Sobic002G371600 Sobic002G371600 Sobic002G160700--Sobic002G371600 Sobic006G029100 Sobic006G029100 Sobic002G160700--Sobic006G029100 Sobic001G248100 Sobic001G248100 Sobic002G160700--Sobic001G248100 Sobic006G265600 Sobic006G265600 Sobic002G160700--Sobic006G265600 Sobic002G199400 Sobic002G199400 Sobic002G160700--Sobic002G199400 Sobic002G408900 Sobic002G408900 Sobic002G160700--Sobic002G408900 Sobic004G030400 Sobic004G030400 Sobic002G160700--Sobic004G030400 Sobic005G115500 Sobic005G115500 Sobic002G160700--Sobic005G115500 Sobic004G122900 Sobic004G122900 Sobic002G131400--Sobic004G122900 Sobic002G131400--Sobic001G467100 Sobic009G199500 Sobic009G199500 Sobic002G131400--Sobic009G199500 Sobic002G131400--Sobic001G211900 Sobic002G131400--Sobic001G099900 Sobic002G364900 Sobic002G364900 Sobic002G131400--Sobic002G364900 Sobic002G131400--Sobic001G405600 Sobic002G131400--Sobic007G105900 Sobic003G181700 Sobic003G181700 Sobic002G131400--Sobic003G181700 Sobic003G165101 Sobic003G165101 Sobic010G179700--Sobic003G165101 Sobic010G179700--Sobic001G467100 Sobic010G179700--Sobic004G208500 Sobic010G179700--Sobic003G395300 Sobic002G144275 Sobic002G144275 Sobic010G179700--Sobic002G144275 Sobic001G004200 Sobic001G004200 Sobic010G179700--Sobic001G004200 Sobic008G072200 Sobic008G072200 Sobic010G179700--Sobic008G072200 Sobic004G075200 Sobic004G075200 Sobic010G179700--Sobic004G075200 Sobic005G163700 Sobic005G163700 Sobic010G179700--Sobic005G163700 Sobic010G223400 Sobic010G223400 Sobic003G182300--Sobic010G223400 Sobic003G363700 Sobic003G363700 Sobic003G182300--Sobic003G363700 Sobic003G182300--Sobic001G449900 Sobic003G182300--Sobic001G474400 Sobic003G193500 Sobic003G193500 Sobic003G182300--Sobic003G193500 Sobic010G169900 Sobic010G169900 Sobic003G182300--Sobic010G169900 Sobic001G015400 Sobic001G015400 Sobic003G182300--Sobic001G015400 Sobic007G042900 Sobic007G042900 Sobic003G182300--Sobic007G042900 Sobic003G182300--Sobic003G181700
Octagon: transcription factors


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