Gene annotation
Transcriptome id Sobic.003G202100.1
Synonym Sb03g026410
Functional annotation Uncharacterized ACR, COG1565 containing protein, putative, expressed
UniProt C5XPH5
Pfam PF02636
Panther DB PTHR12049 PTHR12049:SF7
NCBI CDD -
KEGG Orthology K18164; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G28700 : Protein of unknown function (DUF185)
RAP-DB (Rice) LOC_Os01g40620.1 : Uncharacterized ACR, COG1565 containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a038424
Brachypodium KQK08487 , PNT72277
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G202100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G260700 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
2 Sobic.008G171400 phosphonate metabolism protein-related, putative, expressed -
3 Sobic.001G304000 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
4 Sobic.001G537100 dehydrogenase-phosphopantetheinyltransferase, putative, expressed K06133: LYS5, 4'-phosphopantetheinyl transferase
5 Sobic.003G304400 NLI interacting factor-like phosphatase, putative, expressed K17496: mitochondrial import inner membrane translocase subunit TIM50
6 Sobic.003G392600 expressed protein -
7 Sobic.002G071100 expressed protein K17408: DAP3, small subunit ribosomal protein S29
8 Sobic.003G388900 PPR repeat domain containing protein, putative, expressed -
9 Sobic.003G166500 NAD dependent epimerase/dehydratase family protein, putative, expressed -
10 Sobic.003G388700 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
11 Sobic.008G072500 SAM-dependent methyltransferase, putative, expressed K18162: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5
12 Sobic.003G048600 OsGrx_S15.1 - glutaredoxin subgroup II, expressed -
13 Sobic.002G364900 PPR repeat domain containing protein, putative, expressed -
14 Sobic.010G192600 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
15 Sobic.001G358500 GA20734-PA, putative, expressed -
16 Sobic.004G186900 RNA recognition motif containing protein, putative, expressed -
17 Sobic.005G018800 expressed protein -
18 Sobic.007G118500 galactosyltransferase family protein, putative, expressed -
19 Sobic.006G020900 phosphoglycerate mutase, putative, expressed -
20 Sobic.002G367800 PPR repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G202100 Sobic003G202100 Sobic009G260700 Sobic009G260700 Sobic003G202100--Sobic009G260700 Sobic008G171400 Sobic008G171400 Sobic003G202100--Sobic008G171400 Sobic001G304000 Sobic001G304000 Sobic003G202100--Sobic001G304000 Sobic001G537100 Sobic001G537100 Sobic003G202100--Sobic001G537100 Sobic003G304400 Sobic003G304400 Sobic003G202100--Sobic003G304400 Sobic003G392600 Sobic003G392600 Sobic003G202100--Sobic003G392600 Sobic002G071100 Sobic002G071100 Sobic003G202100--Sobic002G071100 Sobic003G388900 Sobic003G388900 Sobic003G202100--Sobic003G388900 Sobic003G166500 Sobic003G166500 Sobic003G202100--Sobic003G166500 Sobic009G260700--Sobic003G202100 Sobic009G260700--Sobic008G171400 Sobic009G260700--Sobic001G304000 Sobic009G260700--Sobic001G537100 Sobic002G395500 Sobic002G395500 Sobic009G260700--Sobic002G395500 Sobic006G220400 Sobic006G220400 Sobic009G260700--Sobic006G220400 Sobic001G389200 Sobic001G389200 Sobic009G260700--Sobic001G389200 Sobic009G260700--Sobic003G166500 Sobic008G168200 Sobic008G168200 Sobic009G260700--Sobic008G168200 Sobic008G171400--Sobic001G389200 Sobic007G118500 Sobic007G118500 Sobic008G171400--Sobic007G118500 Sobic008G171400--Sobic003G202100 Sobic008G171400--Sobic001G304000 Sobic010G133400 Sobic010G133400 Sobic008G171400--Sobic010G133400 Sobic003G156400 Sobic003G156400 Sobic008G171400--Sobic003G156400 Sobic001G205100 Sobic001G205100 Sobic008G171400--Sobic001G205100 Sobic008G171400--Sobic009G260700 Sobic008G171400--Sobic008G168200 Sobic001G304000--Sobic003G202100 Sobic001G304000--Sobic008G171400 Sobic005G018800 Sobic005G018800 Sobic001G304000--Sobic005G018800 Sobic001G304000--Sobic002G071100 Sobic001G304000--Sobic003G388900 Sobic006G020900 Sobic006G020900 Sobic001G304000--Sobic006G020900 Sobic001G178500 Sobic001G178500 Sobic001G304000--Sobic001G178500 Sobic007G206300 Sobic007G206300 Sobic001G304000--Sobic007G206300 Sobic001G304000--Sobic008G168200 Sobic001G537100--Sobic003G202100 Sobic001G537100--Sobic008G171400 Sobic001G116500 Sobic001G116500 Sobic001G537100--Sobic001G116500 Sobic006G039400 Sobic006G039400 Sobic001G537100--Sobic006G039400 Sobic001G537100--Sobic005G018800 Sobic001G537100--Sobic009G260700 Sobic004G094700 Sobic004G094700 Sobic001G537100--Sobic004G094700 Sobic010G192600 Sobic010G192600 Sobic001G537100--Sobic010G192600 Sobic001G537100--Sobic007G118500 Sobic002G364900 Sobic002G364900 Sobic003G304400--Sobic002G364900 Sobic003G397900 Sobic003G397900 Sobic003G304400--Sobic003G397900 Sobic002G398700 Sobic002G398700 Sobic003G304400--Sobic002G398700 Sobic001G474400 Sobic001G474400 Sobic003G304400--Sobic001G474400 Sobic002G150700 Sobic002G150700 Sobic003G304400--Sobic002G150700 Sobic003G304400--Sobic010G192600 Sobic003G304400--Sobic003G202100 Sobic001G015400 Sobic001G015400 Sobic003G304400--Sobic001G015400 Sobic006G265600 Sobic006G265600 Sobic003G304400--Sobic006G265600 Sobic003G392600--Sobic003G202100 Sobic003G392600--Sobic006G020900 Sobic003G392600--Sobic001G304000 Sobic003G388700 Sobic003G388700 Sobic003G392600--Sobic003G388700 Sobic003G392600--Sobic002G071100 Sobic003G392600--Sobic005G018800 Sobic003G326900 Sobic003G326900 Sobic003G392600--Sobic003G326900 Sobic003G392600--Sobic009G260700 Sobic003G392600--Sobic001G537100 Sobic001G011000 Sobic001G011000 Sobic002G071100--Sobic001G011000 Sobic001G380600 Sobic001G380600 Sobic002G071100--Sobic001G380600 Sobic002G367800 Sobic002G367800 Sobic002G071100--Sobic002G367800 Sobic002G071100--Sobic003G202100 Sobic002G071100--Sobic001G304000 Sobic004G356300 Sobic004G356300 Sobic002G071100--Sobic004G356300 Sobic004G212100 Sobic004G212100 Sobic002G071100--Sobic004G212100 Sobic009G041800 Sobic009G041800 Sobic002G071100--Sobic009G041800 Sobic002G071100--Sobic003G388900 Sobic003G388900--Sobic002G367800 Sobic002G402500 Sobic002G402500 Sobic003G388900--Sobic002G402500 Sobic001G522000 Sobic001G522000 Sobic003G388900--Sobic001G522000 Sobic003G388900--Sobic003G202100 Sobic003G388900--Sobic004G212100 Sobic003G388900--Sobic001G304000 Sobic002G295900 Sobic002G295900 Sobic003G388900--Sobic002G295900 Sobic001G413100 Sobic001G413100 Sobic003G388900--Sobic001G413100 Sobic003G205400 Sobic003G205400 Sobic003G388900--Sobic003G205400 Sobic004G037200 Sobic004G037200 Sobic003G166500--Sobic004G037200 Sobic008G072500 Sobic008G072500 Sobic003G166500--Sobic008G072500 Sobic003G166500--Sobic003G202100 Sobic006G017800 Sobic006G017800 Sobic003G166500--Sobic006G017800 Sobic003G048600 Sobic003G048600 Sobic003G166500--Sobic003G048600 Sobic003G166500--Sobic005G018800 Sobic001G115700 Sobic001G115700 Sobic003G166500--Sobic001G115700 Sobic006G106300 Sobic006G106300 Sobic003G166500--Sobic006G106300 Sobic003G166500--Sobic010G133400
Octagon: transcription factors


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