Gene annotation
Transcriptome id Sobic.005G018800.1
Synonym Sb05g001600
Functional annotation expressed protein
UniProt C5Y3M3
Pfam -
Panther DB PTHR35285
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G13410 : -
RAP-DB (Rice) LOC_Os11g03380.1 : expressed protein
MaizeGDB (Corn) Zm00025a033355 , Zm00025a013149
Brachypodium KQJ92486
Barley HORVU5Hr1G045630.9 , HORVU5Hr1G045630.8 , HORVU5Hr1G045630.3 , HORVU5Hr1G045630.2 , HORVU5Hr1G045630.11 , HORVU5Hr1G045630.10 , HORVU5Hr1G045630.7 , HORVU5Hr1G045630.6 , HORVU5Hr1G045630.5 , HORVU5Hr1G045630.4 , HORVU5Hr1G045630.12 , HORVU5Hr1G045630.1
Wheat -
Populus -


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cDNA sequences
Sobic.005G018800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G200800 vacuolar ATP synthase subunit d, putative, expressed K02146: ATPeV0D, V-type H+-transporting ATPase subunit d
2 Sobic.008G021200 vacuolar ATP synthase subunit C, putative, expressed K02148: ATPeV1C, V-type H+-transporting ATPase subunit C
3 Sobic.004G060100 ATP synthase, putative, expressed K02145: ATPeV1A, V-type H+-transporting ATPase subunit A
4 Sobic.007G161200 expressed protein -
5 Sobic.009G256000 vacuolar ATP synthase subunit C, putative, expressed K02148: ATPeV1C, V-type H+-transporting ATPase subunit C
6 Sobic.001G115700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K03934: NADH dehydrogenase (ubiquinone) Fe-S protein 1
7 Sobic.004G283600 O-acyltransferase, putative, expressed K13519: LPT1, lysophospholipid acyltransferase
8 Sobic.001G304000 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
9 Sobic.005G004100 outer membrane protein, OMP85 family, putative, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
10 Sobic.008G171400 phosphonate metabolism protein-related, putative, expressed -
11 Sobic.003G202100 Uncharacterized ACR, COG1565 containing protein, putative, expressed K18164: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
12 Sobic.004G347600 vacuolar ATP synthase subunit H, putative, expressed K02144: V-type H+-transporting ATPase subunit H
13 Sobic.002G070600 coatomer subunit gamma-2, putative, expressed K17267: coatomer subunit gamma
14 Sobic.001G537100 dehydrogenase-phosphopantetheinyltransferase, putative, expressed K06133: LYS5, 4'-phosphopantetheinyl transferase
15 Sobic.001G465400 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed K00658: DLST, 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
16 Sobic.008G072200 coatomer subunit delta, putative, expressed -
17 Sobic.004G094700 ATP synthase, putative, expressed K02147: ATPeV1B, V-type H+-transporting ATPase subunit B
18 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
19 Sobic.003G166500 NAD dependent epimerase/dehydratase family protein, putative, expressed -
20 Sobic.006G020900 phosphoglycerate mutase, putative, expressed -


Gene co-expression network
sample Sobic005G018800 Sobic005G018800 Sobic003G200800 Sobic003G200800 Sobic005G018800--Sobic003G200800 Sobic008G021200 Sobic008G021200 Sobic005G018800--Sobic008G021200 Sobic004G060100 Sobic004G060100 Sobic005G018800--Sobic004G060100 Sobic007G161200 Sobic007G161200 Sobic005G018800--Sobic007G161200 Sobic009G256000 Sobic009G256000 Sobic005G018800--Sobic009G256000 Sobic001G115700 Sobic001G115700 Sobic005G018800--Sobic001G115700 Sobic004G283600 Sobic004G283600 Sobic005G018800--Sobic004G283600 Sobic001G304000 Sobic001G304000 Sobic005G018800--Sobic001G304000 Sobic005G004100 Sobic005G004100 Sobic005G018800--Sobic005G004100 Sobic003G200800--Sobic005G018800 Sobic003G200800--Sobic007G161200 Sobic003G200800--Sobic008G021200 Sobic003G200800--Sobic004G060100 Sobic003G200800--Sobic001G115700 Sobic003G200800--Sobic009G256000 Sobic003G200800--Sobic004G283600 Sobic001G428800 Sobic001G428800 Sobic003G200800--Sobic001G428800 Sobic004G347600 Sobic004G347600 Sobic003G200800--Sobic004G347600 Sobic008G021200--Sobic005G018800 Sobic008G021200--Sobic004G060100 Sobic008G021200--Sobic003G200800 Sobic008G021200--Sobic009G256000 Sobic008G021200--Sobic007G161200 Sobic008G021200--Sobic004G283600 Sobic006G237200 Sobic006G237200 Sobic008G021200--Sobic006G237200 Sobic008G021200--Sobic005G004100 Sobic002G321400 Sobic002G321400 Sobic008G021200--Sobic002G321400 Sobic004G060100--Sobic008G021200 Sobic004G060100--Sobic007G161200 Sobic004G060100--Sobic005G018800 Sobic004G060100--Sobic009G256000 Sobic004G060100--Sobic003G200800 Sobic004G060100--Sobic004G283600 Sobic004G060100--Sobic005G004100 Sobic004G060100--Sobic002G321400 Sobic001G435400 Sobic001G435400 Sobic004G060100--Sobic001G435400 Sobic007G161200--Sobic004G060100 Sobic007G161200--Sobic003G200800 Sobic007G161200--Sobic005G018800 Sobic007G161200--Sobic009G256000 Sobic007G161200--Sobic004G347600 Sobic007G161200--Sobic008G021200 Sobic007G161200--Sobic001G115700 Sobic008G150300 Sobic008G150300 Sobic007G161200--Sobic008G150300 Sobic007G161200--Sobic004G283600 Sobic009G256000--Sobic005G004100 Sobic009G256000--Sobic004G060100 Sobic009G256000--Sobic008G021200 Sobic009G256000--Sobic007G161200 Sobic009G256000--Sobic005G018800 Sobic009G256000--Sobic004G283600 Sobic009G256000--Sobic003G200800 Sobic002G410700 Sobic002G410700 Sobic009G256000--Sobic002G410700 Sobic009G256000--Sobic006G237200 Sobic001G458800 Sobic001G458800 Sobic001G115700--Sobic001G458800 Sobic003G034900 Sobic003G034900 Sobic001G115700--Sobic003G034900 Sobic001G465400 Sobic001G465400 Sobic001G115700--Sobic001G465400 Sobic008G072200 Sobic008G072200 Sobic001G115700--Sobic008G072200 Sobic001G115700--Sobic004G347600 Sobic001G115700--Sobic005G018800 Sobic009G191400 Sobic009G191400 Sobic001G115700--Sobic009G191400 Sobic001G115700--Sobic003G200800 Sobic002G186300 Sobic002G186300 Sobic001G115700--Sobic002G186300 Sobic004G283600--Sobic009G256000 Sobic004G283600--Sobic004G060100 Sobic004G283600--Sobic007G161200 Sobic004G283600--Sobic005G018800 Sobic004G283600--Sobic005G004100 Sobic004G283600--Sobic008G021200 Sobic004G283600--Sobic003G200800 Sobic003G165101 Sobic003G165101 Sobic004G283600--Sobic003G165101 Sobic001G004200 Sobic001G004200 Sobic004G283600--Sobic001G004200 Sobic003G202100 Sobic003G202100 Sobic001G304000--Sobic003G202100 Sobic008G171400 Sobic008G171400 Sobic001G304000--Sobic008G171400 Sobic001G304000--Sobic005G018800 Sobic002G071100 Sobic002G071100 Sobic001G304000--Sobic002G071100 Sobic003G388900 Sobic003G388900 Sobic001G304000--Sobic003G388900 Sobic006G020900 Sobic006G020900 Sobic001G304000--Sobic006G020900 Sobic001G178500 Sobic001G178500 Sobic001G304000--Sobic001G178500 Sobic007G206300 Sobic007G206300 Sobic001G304000--Sobic007G206300 Sobic008G168200 Sobic008G168200 Sobic001G304000--Sobic008G168200 Sobic005G004100--Sobic009G256000 Sobic005G004100--Sobic004G060100 Sobic005G004100--Sobic004G283600 Sobic005G004100--Sobic005G018800 Sobic005G004100--Sobic007G161200 Sobic005G004100--Sobic008G021200 Sobic008G004300 Sobic008G004300 Sobic005G004100--Sobic008G004300 Sobic002G301200 Sobic002G301200 Sobic005G004100--Sobic002G301200 Sobic005G004100--Sobic002G410700
Octagon: transcription factors


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