Gene annotation
Transcriptome id Sobic.004G060100.1
Synonym VHA-A, Sb04g005040
Functional annotation ATP synthase, putative, expressed
UniProt C5XW73
Pfam PF02874 PF00306 PF16886 PF00006
Panther DB PTHR15184 PTHR15184:SF7
NCBI CDD -
KEGG Orthology K02145; ATPeV1A, V-type H+-transporting ATPase subunit A
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT1G78900 : vacuolar ATP synthase subunit A
RAP-DB (Rice) LOC_Os06g45120.1 : ATP synthase, putative, expressed
MaizeGDB (Corn) Zm00025a054391 , Zm00025a042216 , Zm00025a034768 , Zm00025a019137
Brachypodium KQK16969 , KQJ93593
Barley HORVU7Hr1G109770.8 , HORVU7Hr1G109770.3 , HORVU7Hr1G109770.2 , HORVU7Hr1G109770.1 , HORVU7Hr1G109770.7 , HORVU7Hr1G109770.6 , HORVU7Hr1G109770.5 , HORVU7Hr1G109770.4
Wheat TraesCS7B02G392600 , TraesCS7A02G489500 , TraesCS7A02G489500 , TraesCS7D02G475900 , TraesCS7D02G475900
Populus -


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cDNA sequences
Sobic.004G060100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G021200 vacuolar ATP synthase subunit C, putative, expressed K02148: ATPeV1C, V-type H+-transporting ATPase subunit C
2 Sobic.007G161200 expressed protein -
3 Sobic.005G018800 expressed protein -
4 Sobic.009G256000 vacuolar ATP synthase subunit C, putative, expressed K02148: ATPeV1C, V-type H+-transporting ATPase subunit C
5 Sobic.003G200800 vacuolar ATP synthase subunit d, putative, expressed K02146: ATPeV0D, V-type H+-transporting ATPase subunit d
6 Sobic.004G283600 O-acyltransferase, putative, expressed K13519: LPT1, lysophospholipid acyltransferase
7 Sobic.005G004100 outer membrane protein, OMP85 family, putative, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
8 Sobic.002G321400 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
9 Sobic.001G435400 vacuolar ATP synthase 98 kDa subunit, putative, expressed K02154: ATPeV0A, V-type H+-transporting ATPase subunit a
10 Sobic.002G070600 coatomer subunit gamma-2, putative, expressed K17267: coatomer subunit gamma
11 Sobic.001G115700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K03934: NADH dehydrogenase (ubiquinone) Fe-S protein 1
12 Sobic.008G085700 exocyst complex component 5, putative, expressed -
13 Sobic.008G072200 coatomer subunit delta, putative, expressed -
14 Sobic.008G190100 acetyl-CoA acetyltransferase, cytosolic, putative, expressed K00626: ACAT, acetyl-CoA C-acetyltransferase
15 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
16 Sobic.006G237200 vacuolar ATP synthase subunit D 1, putative, expressed K02149: ATPeV1D, V-type H+-transporting ATPase subunit D
17 Sobic.007G162100 TENA/THI-4 family protein, putative, expressed -
18 Sobic.003G165101 - K12876: RBM8A, RNA-binding protein 8A
19 Sobic.002G410700 vacuolar ATP synthase subunit F, putative, expressed K02151: ATPeV1F, V-type H+-transporting ATPase subunit F
20 Sobic.001G301200 pattern formation protein EMB30, putative, expressed K18443: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1


Gene co-expression network
sample Sobic004G060100 Sobic004G060100 Sobic008G021200 Sobic008G021200 Sobic004G060100--Sobic008G021200 Sobic007G161200 Sobic007G161200 Sobic004G060100--Sobic007G161200 Sobic005G018800 Sobic005G018800 Sobic004G060100--Sobic005G018800 Sobic009G256000 Sobic009G256000 Sobic004G060100--Sobic009G256000 Sobic003G200800 Sobic003G200800 Sobic004G060100--Sobic003G200800 Sobic004G283600 Sobic004G283600 Sobic004G060100--Sobic004G283600 Sobic005G004100 Sobic005G004100 Sobic004G060100--Sobic005G004100 Sobic002G321400 Sobic002G321400 Sobic004G060100--Sobic002G321400 Sobic001G435400 Sobic001G435400 Sobic004G060100--Sobic001G435400 Sobic008G021200--Sobic005G018800 Sobic008G021200--Sobic004G060100 Sobic008G021200--Sobic003G200800 Sobic008G021200--Sobic009G256000 Sobic008G021200--Sobic007G161200 Sobic008G021200--Sobic004G283600 Sobic006G237200 Sobic006G237200 Sobic008G021200--Sobic006G237200 Sobic008G021200--Sobic005G004100 Sobic008G021200--Sobic002G321400 Sobic007G161200--Sobic004G060100 Sobic007G161200--Sobic003G200800 Sobic007G161200--Sobic005G018800 Sobic007G161200--Sobic009G256000 Sobic004G347600 Sobic004G347600 Sobic007G161200--Sobic004G347600 Sobic007G161200--Sobic008G021200 Sobic001G115700 Sobic001G115700 Sobic007G161200--Sobic001G115700 Sobic008G150300 Sobic008G150300 Sobic007G161200--Sobic008G150300 Sobic007G161200--Sobic004G283600 Sobic005G018800--Sobic003G200800 Sobic005G018800--Sobic008G021200 Sobic005G018800--Sobic004G060100 Sobic005G018800--Sobic007G161200 Sobic005G018800--Sobic009G256000 Sobic005G018800--Sobic001G115700 Sobic005G018800--Sobic004G283600 Sobic001G304000 Sobic001G304000 Sobic005G018800--Sobic001G304000 Sobic005G018800--Sobic005G004100 Sobic009G256000--Sobic005G004100 Sobic009G256000--Sobic004G060100 Sobic009G256000--Sobic008G021200 Sobic009G256000--Sobic007G161200 Sobic009G256000--Sobic005G018800 Sobic009G256000--Sobic004G283600 Sobic009G256000--Sobic003G200800 Sobic002G410700 Sobic002G410700 Sobic009G256000--Sobic002G410700 Sobic009G256000--Sobic006G237200 Sobic003G200800--Sobic005G018800 Sobic003G200800--Sobic007G161200 Sobic003G200800--Sobic008G021200 Sobic003G200800--Sobic004G060100 Sobic003G200800--Sobic001G115700 Sobic003G200800--Sobic009G256000 Sobic003G200800--Sobic004G283600 Sobic001G428800 Sobic001G428800 Sobic003G200800--Sobic001G428800 Sobic003G200800--Sobic004G347600 Sobic004G283600--Sobic009G256000 Sobic004G283600--Sobic004G060100 Sobic004G283600--Sobic007G161200 Sobic004G283600--Sobic005G018800 Sobic004G283600--Sobic005G004100 Sobic004G283600--Sobic008G021200 Sobic004G283600--Sobic003G200800 Sobic003G165101 Sobic003G165101 Sobic004G283600--Sobic003G165101 Sobic001G004200 Sobic001G004200 Sobic004G283600--Sobic001G004200 Sobic005G004100--Sobic009G256000 Sobic005G004100--Sobic004G060100 Sobic005G004100--Sobic004G283600 Sobic005G004100--Sobic005G018800 Sobic005G004100--Sobic007G161200 Sobic005G004100--Sobic008G021200 Sobic008G004300 Sobic008G004300 Sobic005G004100--Sobic008G004300 Sobic002G301200 Sobic002G301200 Sobic005G004100--Sobic002G301200 Sobic005G004100--Sobic002G410700 Sobic002G321400--Sobic004G060100 Sobic002G321400--Sobic008G021200 Sobic002G321400--Sobic009G256000 Sobic002G321400--Sobic005G018800 Sobic002G321400--Sobic001G435400 Sobic002G321400--Sobic007G161200 Sobic002G321400--Sobic002G301200 Sobic002G321400--Sobic004G283600 Sobic004G094700 Sobic004G094700 Sobic002G321400--Sobic004G094700 Sobic007G162100 Sobic007G162100 Sobic001G435400--Sobic007G162100 Sobic006G127600 Sobic006G127600 Sobic001G435400--Sobic006G127600 Sobic001G435400--Sobic004G094700 Sobic001G283600 Sobic001G283600 Sobic001G435400--Sobic001G283600 Sobic006G039400 Sobic006G039400 Sobic001G435400--Sobic006G039400 Sobic008G033500 Sobic008G033500 Sobic001G435400--Sobic008G033500 Sobic001G435400--Sobic004G060100 Sobic001G435400--Sobic008G021200 Sobic001G435400--Sobic005G018800
Octagon: transcription factors


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