Gene annotation
Transcriptome id Sobic.003G200800.1
Synonym Sb03g026290
Functional annotation vacuolar ATP synthase subunit d, putative, expressed
UniProt C5XPF9
Pfam PF01992
Panther DB PTHR11028
NCBI CDD -
KEGG Orthology K02146; ATPeV0D, V-type H+-transporting ATPase subunit d
Gene Ontology GO:0015078; proton transmembrane transporter activity


Orthologs (automatic annotation)
TAIR AT3G28715 : ATPase, V0/A0 complex, subunit C/D
RAP-DB (Rice) LOC_Os01g40470.1 : vacuolar ATP synthase subunit d, putative, expressed
MaizeGDB (Corn) Zm00025a028523
Brachypodium KQK08477
Barley HORVU3Hr1G050990.2 , HORVU3Hr1G050990.3 , HORVU3Hr1G050990.1
Wheat TraesCS3B02G241000 , TraesCS3D02G213200 , TraesCS3D02G213200 , TraesCS3A02G210400 , TraesCS3A02G210400
Populus -


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cDNA sequences
Sobic.003G200800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G018800 expressed protein -
2 Sobic.007G161200 expressed protein -
3 Sobic.008G021200 vacuolar ATP synthase subunit C, putative, expressed K02148: ATPeV1C, V-type H+-transporting ATPase subunit C
4 Sobic.004G060100 ATP synthase, putative, expressed K02145: ATPeV1A, V-type H+-transporting ATPase subunit A
5 Sobic.001G115700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K03934: NADH dehydrogenase (ubiquinone) Fe-S protein 1
6 Sobic.009G256000 vacuolar ATP synthase subunit C, putative, expressed K02148: ATPeV1C, V-type H+-transporting ATPase subunit C
7 Sobic.004G283600 O-acyltransferase, putative, expressed K13519: LPT1, lysophospholipid acyltransferase
8 Sobic.001G428800 vacuolar sorting protein, putative, expressed -
9 Sobic.004G347600 vacuolar ATP synthase subunit H, putative, expressed K02144: V-type H+-transporting ATPase subunit H
10 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
11 Sobic.002G396700 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial precursor, putative, expressed K03942: NADH dehydrogenase (ubiquinone) flavoprotein 1
12 Sobic.008G072200 coatomer subunit delta, putative, expressed -
13 Sobic.007G162100 TENA/THI-4 family protein, putative, expressed -
14 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
15 Sobic.008G085700 exocyst complex component 5, putative, expressed -
16 Sobic.001G465400 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed K00658: DLST, 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
17 Sobic.009G089700 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
18 Sobic.006G020900 phosphoglycerate mutase, putative, expressed -
19 Sobic.001G358500 GA20734-PA, putative, expressed -
20 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -


Gene co-expression network
sample Sobic003G200800 Sobic003G200800 Sobic005G018800 Sobic005G018800 Sobic003G200800--Sobic005G018800 Sobic007G161200 Sobic007G161200 Sobic003G200800--Sobic007G161200 Sobic008G021200 Sobic008G021200 Sobic003G200800--Sobic008G021200 Sobic004G060100 Sobic004G060100 Sobic003G200800--Sobic004G060100 Sobic001G115700 Sobic001G115700 Sobic003G200800--Sobic001G115700 Sobic009G256000 Sobic009G256000 Sobic003G200800--Sobic009G256000 Sobic004G283600 Sobic004G283600 Sobic003G200800--Sobic004G283600 Sobic001G428800 Sobic001G428800 Sobic003G200800--Sobic001G428800 Sobic004G347600 Sobic004G347600 Sobic003G200800--Sobic004G347600 Sobic005G018800--Sobic003G200800 Sobic005G018800--Sobic008G021200 Sobic005G018800--Sobic004G060100 Sobic005G018800--Sobic007G161200 Sobic005G018800--Sobic009G256000 Sobic005G018800--Sobic001G115700 Sobic005G018800--Sobic004G283600 Sobic001G304000 Sobic001G304000 Sobic005G018800--Sobic001G304000 Sobic005G004100 Sobic005G004100 Sobic005G018800--Sobic005G004100 Sobic007G161200--Sobic004G060100 Sobic007G161200--Sobic003G200800 Sobic007G161200--Sobic005G018800 Sobic007G161200--Sobic009G256000 Sobic007G161200--Sobic004G347600 Sobic007G161200--Sobic008G021200 Sobic007G161200--Sobic001G115700 Sobic008G150300 Sobic008G150300 Sobic007G161200--Sobic008G150300 Sobic007G161200--Sobic004G283600 Sobic008G021200--Sobic005G018800 Sobic008G021200--Sobic004G060100 Sobic008G021200--Sobic003G200800 Sobic008G021200--Sobic009G256000 Sobic008G021200--Sobic007G161200 Sobic008G021200--Sobic004G283600 Sobic006G237200 Sobic006G237200 Sobic008G021200--Sobic006G237200 Sobic008G021200--Sobic005G004100 Sobic002G321400 Sobic002G321400 Sobic008G021200--Sobic002G321400 Sobic004G060100--Sobic008G021200 Sobic004G060100--Sobic007G161200 Sobic004G060100--Sobic005G018800 Sobic004G060100--Sobic009G256000 Sobic004G060100--Sobic003G200800 Sobic004G060100--Sobic004G283600 Sobic004G060100--Sobic005G004100 Sobic004G060100--Sobic002G321400 Sobic001G435400 Sobic001G435400 Sobic004G060100--Sobic001G435400 Sobic001G458800 Sobic001G458800 Sobic001G115700--Sobic001G458800 Sobic003G034900 Sobic003G034900 Sobic001G115700--Sobic003G034900 Sobic001G465400 Sobic001G465400 Sobic001G115700--Sobic001G465400 Sobic008G072200 Sobic008G072200 Sobic001G115700--Sobic008G072200 Sobic001G115700--Sobic004G347600 Sobic001G115700--Sobic005G018800 Sobic009G191400 Sobic009G191400 Sobic001G115700--Sobic009G191400 Sobic001G115700--Sobic003G200800 Sobic002G186300 Sobic002G186300 Sobic001G115700--Sobic002G186300 Sobic009G256000--Sobic005G004100 Sobic009G256000--Sobic004G060100 Sobic009G256000--Sobic008G021200 Sobic009G256000--Sobic007G161200 Sobic009G256000--Sobic005G018800 Sobic009G256000--Sobic004G283600 Sobic009G256000--Sobic003G200800 Sobic002G410700 Sobic002G410700 Sobic009G256000--Sobic002G410700 Sobic009G256000--Sobic006G237200 Sobic004G283600--Sobic009G256000 Sobic004G283600--Sobic004G060100 Sobic004G283600--Sobic007G161200 Sobic004G283600--Sobic005G018800 Sobic004G283600--Sobic005G004100 Sobic004G283600--Sobic008G021200 Sobic004G283600--Sobic003G200800 Sobic003G165101 Sobic003G165101 Sobic004G283600--Sobic003G165101 Sobic001G004200 Sobic001G004200 Sobic004G283600--Sobic001G004200 Sobic001G358500 Sobic001G358500 Sobic001G428800--Sobic001G358500 Sobic001G449900 Sobic001G449900 Sobic001G428800--Sobic001G449900 Sobic010G230600 Sobic010G230600 Sobic001G428800--Sobic010G230600 Sobic004G092500 Sobic004G092500 Sobic001G428800--Sobic004G092500 Sobic010G223300 Sobic010G223300 Sobic001G428800--Sobic010G223300 Sobic001G211900 Sobic001G211900 Sobic001G428800--Sobic001G211900 Sobic001G099900 Sobic001G099900 Sobic001G428800--Sobic001G099900 Sobic010G020400 Sobic010G020400 Sobic001G428800--Sobic010G020400 Sobic009G139300 Sobic009G139300 Sobic001G428800--Sobic009G139300 Sobic004G347600--Sobic009G191400 Sobic001G073600 Sobic001G073600 Sobic004G347600--Sobic001G073600 Sobic004G347600--Sobic003G034900 Sobic004G347600--Sobic001G458800 Sobic004G347600--Sobic001G465400 Sobic001G112400 Sobic001G112400 Sobic004G347600--Sobic001G112400 Sobic004G347600--Sobic001G115700 Sobic004G347600--Sobic007G161200 Sobic001G443200 Sobic001G443200 Sobic004G347600--Sobic001G443200
Octagon: transcription factors


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