Gene annotation
Transcriptome id Sobic.006G039400.1
Synonym
Functional annotation cation efflux family protein, putative, expressed
UniProt A0A1B6PJZ8
Pfam PF01545
Panther DB PTHR13414
NCBI CDD -
KEGG Orthology K14696; SLC30A9, solute carrier family 30 (zinc transporter), member 9
Gene Ontology GO:0016021; integral component of membrane GO:0008324cation transmembrane transporter activity GO:0006812cation transport


Orthologs (automatic annotation)
TAIR AT1G51610 : Cation efflux family protein
RAP-DB (Rice) LOC_Os04g23180.1 : cation efflux family protein, putative, expressed
MaizeGDB (Corn) Zm00025a055773 , Zm00025a011920
Brachypodium PNT60804
Barley HORVU2Hr1G065930.19 , HORVU2Hr1G065930.18 , HORVU2Hr1G065930.15 , HORVU2Hr1G065930.14 , HORVU2Hr1G065930.17 , HORVU2Hr1G065930.16 , HORVU2Hr1G065930.11 , HORVU2Hr1G065930.10 , HORVU2Hr1G065930.13 , HORVU2Hr1G065930.12 , HORVU2Hr1G065930.9 , HORVU2Hr1G065930.8 , HORVU2Hr1G065930.1 , HORVU2Hr1G065930.3 , HORVU2Hr1G065930.2 , HORVU2Hr1G065930.5 , HORVU2Hr1G065930.4 , HORVU2Hr1G065930.7 , HORVU2Hr1G065930.6 , HORVU2Hr1G065930.20
Wheat TraesCS2A02G270600 , TraesCS2D02G269700 , TraesCS2D02G269700 , TraesCS2B02G289400
Populus -


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cDNA sequences
Sobic.006G039400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G093300 expressed protein K02519: infB, translation initiation factor IF-2
2 Sobic.001G405600 basic helix-loop-helix, putative, expressed K10863: aprataxin
3 Sobic.003G296900 expressed protein -
4 Sobic.001G237600 transcription factor Dp, putative, expressed K04683: transcription factor Dp-1
5 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3
6 Sobic.010G230600 DnaK family protein, putative, expressed K09489: heat shock 70kDa protein 4
7 Sobic.007G162100 TENA/THI-4 family protein, putative, expressed -
8 Sobic.007G087000 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
9 Sobic.001G283600 NTMC2Type1.2 protein, putative, expressed -
10 Sobic.008G085700 exocyst complex component 5, putative, expressed -
11 Sobic.010G020400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
12 Sobic.001G358500 GA20734-PA, putative, expressed -
13 Sobic.002G079000 expressed protein -
14 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -
15 Sobic.010G244900 auxin efflux carrier, putative, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
16 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
17 Sobic.001G434200 AGAP008572-PA, putative, expressed K17796: mitochondrial import inner membrane translocase subunit TIM21
18 Sobic.001G049400 OsPP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
19 Sobic.003G395300 TBC domain containing protein, expressed -
20 Sobic.008G171400 phosphonate metabolism protein-related, putative, expressed -


Gene co-expression network
sample Sobic006G039400 Sobic006G039400 Sobic006G093300 Sobic006G093300 Sobic006G039400--Sobic006G093300 Sobic001G405600 Sobic001G405600 Sobic006G039400--Sobic001G405600 Sobic003G296900 Sobic003G296900 Sobic006G039400--Sobic003G296900 Sobic001G237600 Sobic001G237600 Sobic006G039400--Sobic001G237600 Sobic003G182300 Sobic003G182300 Sobic006G039400--Sobic003G182300 Sobic010G230600 Sobic010G230600 Sobic006G039400--Sobic010G230600 Sobic007G162100 Sobic007G162100 Sobic006G039400--Sobic007G162100 Sobic007G087000 Sobic007G087000 Sobic006G039400--Sobic007G087000 Sobic001G283600 Sobic001G283600 Sobic006G039400--Sobic001G283600 Sobic006G093300--Sobic006G039400 Sobic001G434200 Sobic001G434200 Sobic006G093300--Sobic001G434200 Sobic008G185800 Sobic008G185800 Sobic006G093300--Sobic008G185800 Sobic003G241700 Sobic003G241700 Sobic006G093300--Sobic003G241700 Sobic006G093300--Sobic001G283600 Sobic001G333100 Sobic001G333100 Sobic006G093300--Sobic001G333100 Sobic003G308500 Sobic003G308500 Sobic006G093300--Sobic003G308500 Sobic006G093300--Sobic003G296900 Sobic006G184900 Sobic006G184900 Sobic006G093300--Sobic006G184900 Sobic007G017800 Sobic007G017800 Sobic001G405600--Sobic007G017800 Sobic010G034100 Sobic010G034100 Sobic001G405600--Sobic010G034100 Sobic007G105900 Sobic007G105900 Sobic001G405600--Sobic007G105900 Sobic010G059500 Sobic010G059500 Sobic001G405600--Sobic010G059500 Sobic003G143200 Sobic003G143200 Sobic001G405600--Sobic003G143200 Sobic006G234700 Sobic006G234700 Sobic001G405600--Sobic006G234700 Sobic001G405600--Sobic006G039400 Sobic001G405600--Sobic003G296900 Sobic001G035200 Sobic001G035200 Sobic001G405600--Sobic001G035200 Sobic003G043000 Sobic003G043000 Sobic003G296900--Sobic003G043000 Sobic001G065100 Sobic001G065100 Sobic003G296900--Sobic001G065100 Sobic004G053500 Sobic004G053500 Sobic003G296900--Sobic004G053500 Sobic003G296900--Sobic003G308500 Sobic004G265500 Sobic004G265500 Sobic003G296900--Sobic004G265500 Sobic003G296900--Sobic003G241700 Sobic001G255800 Sobic001G255800 Sobic003G296900--Sobic001G255800 Sobic010G000800 Sobic010G000800 Sobic003G296900--Sobic010G000800 Sobic004G131300 Sobic004G131300 Sobic003G296900--Sobic004G131300 Sobic003G363700 Sobic003G363700 Sobic001G237600--Sobic003G363700 Sobic004G320700 Sobic004G320700 Sobic001G237600--Sobic004G320700 Sobic002G079000 Sobic002G079000 Sobic001G237600--Sobic002G079000 Sobic001G237600--Sobic007G087000 Sobic001G237600--Sobic006G039400 Sobic003G202600 Sobic003G202600 Sobic001G237600--Sobic003G202600 Sobic010G244900 Sobic010G244900 Sobic001G237600--Sobic010G244900 Sobic001G095000 Sobic001G095000 Sobic001G237600--Sobic001G095000 Sobic002G292900 Sobic002G292900 Sobic001G237600--Sobic002G292900 Sobic010G223400 Sobic010G223400 Sobic003G182300--Sobic010G223400 Sobic003G182300--Sobic003G363700 Sobic001G449900 Sobic001G449900 Sobic003G182300--Sobic001G449900 Sobic001G474400 Sobic001G474400 Sobic003G182300--Sobic001G474400 Sobic003G193500 Sobic003G193500 Sobic003G182300--Sobic003G193500 Sobic010G169900 Sobic010G169900 Sobic003G182300--Sobic010G169900 Sobic001G015400 Sobic001G015400 Sobic003G182300--Sobic001G015400 Sobic007G042900 Sobic007G042900 Sobic003G182300--Sobic007G042900 Sobic003G181700 Sobic003G181700 Sobic003G182300--Sobic003G181700 Sobic001G428800 Sobic001G428800 Sobic010G230600--Sobic001G428800 Sobic010G230600--Sobic001G449900 Sobic010G230600--Sobic007G162100 Sobic010G020400 Sobic010G020400 Sobic010G230600--Sobic010G020400 Sobic010G230600--Sobic006G039400 Sobic004G092500 Sobic004G092500 Sobic010G230600--Sobic004G092500 Sobic001G156900 Sobic001G156900 Sobic010G230600--Sobic001G156900 Sobic007G125000 Sobic007G125000 Sobic010G230600--Sobic007G125000 Sobic008G085700 Sobic008G085700 Sobic010G230600--Sobic008G085700 Sobic006G127600 Sobic006G127600 Sobic007G162100--Sobic006G127600 Sobic007G162100--Sobic001G283600 Sobic009G084900 Sobic009G084900 Sobic007G162100--Sobic009G084900 Sobic001G435400 Sobic001G435400 Sobic007G162100--Sobic001G435400 Sobic003G189600 Sobic003G189600 Sobic007G162100--Sobic003G189600 Sobic007G162100--Sobic010G020400 Sobic003G264100 Sobic003G264100 Sobic007G162100--Sobic003G264100 Sobic007G132100 Sobic007G132100 Sobic007G162100--Sobic007G132100 Sobic009G192300 Sobic009G192300 Sobic007G162100--Sobic009G192300 Sobic007G087000--Sobic002G079000 Sobic007G076400 Sobic007G076400 Sobic007G087000--Sobic007G076400 Sobic002G306100 Sobic002G306100 Sobic007G087000--Sobic002G306100 Sobic008G116700 Sobic008G116700 Sobic007G087000--Sobic008G116700 Sobic006G250800 Sobic006G250800 Sobic007G087000--Sobic006G250800 Sobic001G014200 Sobic001G014200 Sobic007G087000--Sobic001G014200 Sobic007G087000--Sobic001G237600 Sobic007G172700 Sobic007G172700 Sobic007G087000--Sobic007G172700 Sobic009G107300 Sobic009G107300 Sobic007G087000--Sobic009G107300 Sobic001G283600--Sobic007G162100 Sobic001G283600--Sobic010G034100 Sobic008G048300 Sobic008G048300 Sobic001G283600--Sobic008G048300 Sobic002G170200 Sobic002G170200 Sobic001G283600--Sobic002G170200 Sobic001G283600--Sobic006G127600 Sobic001G283600--Sobic006G039400 Sobic008G033500 Sobic008G033500 Sobic001G283600--Sobic008G033500 Sobic001G283600--Sobic006G093300 Sobic008G082500 Sobic008G082500 Sobic001G283600--Sobic008G082500
Octagon: transcription factors


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