Gene annotation
Transcriptome id Sobic.008G171400.1
Synonym Sb08g021620
Functional annotation phosphonate metabolism protein-related, putative, expressed
UniProt C5YS20
Pfam PF12706
Panther DB PTHR12553 PTHR12553:SF47
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G30300 : Metallo-hydrolase/oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os12g42100.1 : phosphonate metabolism protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a004704
Brachypodium KQJ85778
Barley -
Wheat TraesCS5D02G043200 , TraesCS5B02G035300 , TraesCS5A02G035000
Populus -


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cDNA sequences
Sobic.008G171400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
2 Sobic.007G118500 galactosyltransferase family protein, putative, expressed -
3 Sobic.003G202100 Uncharacterized ACR, COG1565 containing protein, putative, expressed K18164: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
4 Sobic.001G304000 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
5 Sobic.010G133400 pantothenate kinase 4, putative, expressed -
6 Sobic.003G156400 OsPDIL2-2 protein disulfide isomerase PDIL2-2, expressed K09584: PDIA6, protein disulfide-isomerase A6
7 Sobic.001G205100 expressed protein -
8 Sobic.009G260700 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
9 Sobic.008G168200 expressed protein -
10 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
11 Sobic.007G172700 ECT5, putative, expressed -
12 Sobic.006G012700 expressed protein -
13 Sobic.001G537100 dehydrogenase-phosphopantetheinyltransferase, putative, expressed K06133: LYS5, 4'-phosphopantetheinyl transferase
14 Sobic.008G072500 SAM-dependent methyltransferase, putative, expressed K18162: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5
15 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
16 Sobic.002G084800 expressed protein -
17 Sobic.002G395500 ATP12 ATPase, putative, expressed K07556: ATPeAF2, ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2
18 Sobic.003G213400 expressed protein -
19 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II
20 Sobic.001G115700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K03934: NADH dehydrogenase (ubiquinone) Fe-S protein 1


Gene co-expression network
sample Sobic008G171400 Sobic008G171400 Sobic001G389200 Sobic001G389200 Sobic008G171400--Sobic001G389200 Sobic007G118500 Sobic007G118500 Sobic008G171400--Sobic007G118500 Sobic003G202100 Sobic003G202100 Sobic008G171400--Sobic003G202100 Sobic001G304000 Sobic001G304000 Sobic008G171400--Sobic001G304000 Sobic010G133400 Sobic010G133400 Sobic008G171400--Sobic010G133400 Sobic003G156400 Sobic003G156400 Sobic008G171400--Sobic003G156400 Sobic001G205100 Sobic001G205100 Sobic008G171400--Sobic001G205100 Sobic009G260700 Sobic009G260700 Sobic008G171400--Sobic009G260700 Sobic008G168200 Sobic008G168200 Sobic008G171400--Sobic008G168200 Sobic006G060000 Sobic006G060000 Sobic001G389200--Sobic006G060000 Sobic001G389200--Sobic008G168200 Sobic002G395500 Sobic002G395500 Sobic001G389200--Sobic002G395500 Sobic002G355800 Sobic002G355800 Sobic001G389200--Sobic002G355800 Sobic004G254800 Sobic004G254800 Sobic001G389200--Sobic004G254800 Sobic004G078700 Sobic004G078700 Sobic001G389200--Sobic004G078700 Sobic007G172700 Sobic007G172700 Sobic001G389200--Sobic007G172700 Sobic010G169900 Sobic010G169900 Sobic001G389200--Sobic010G169900 Sobic009G122500 Sobic009G122500 Sobic001G389200--Sobic009G122500 Sobic003G394500 Sobic003G394500 Sobic007G118500--Sobic003G394500 Sobic004G060300 Sobic004G060300 Sobic007G118500--Sobic004G060300 Sobic002G070300 Sobic002G070300 Sobic007G118500--Sobic002G070300 Sobic007G118500--Sobic010G133400 Sobic001G378800 Sobic001G378800 Sobic007G118500--Sobic001G378800 Sobic006G232800 Sobic006G232800 Sobic007G118500--Sobic006G232800 Sobic001G455000 Sobic001G455000 Sobic007G118500--Sobic001G455000 Sobic001G356100 Sobic001G356100 Sobic007G118500--Sobic001G356100 Sobic007G118500--Sobic008G171400 Sobic003G202100--Sobic009G260700 Sobic003G202100--Sobic008G171400 Sobic003G202100--Sobic001G304000 Sobic001G537100 Sobic001G537100 Sobic003G202100--Sobic001G537100 Sobic003G304400 Sobic003G304400 Sobic003G202100--Sobic003G304400 Sobic003G392600 Sobic003G392600 Sobic003G202100--Sobic003G392600 Sobic002G071100 Sobic002G071100 Sobic003G202100--Sobic002G071100 Sobic003G388900 Sobic003G388900 Sobic003G202100--Sobic003G388900 Sobic003G166500 Sobic003G166500 Sobic003G202100--Sobic003G166500 Sobic001G304000--Sobic003G202100 Sobic001G304000--Sobic008G171400 Sobic005G018800 Sobic005G018800 Sobic001G304000--Sobic005G018800 Sobic001G304000--Sobic002G071100 Sobic001G304000--Sobic003G388900 Sobic006G020900 Sobic006G020900 Sobic001G304000--Sobic006G020900 Sobic001G178500 Sobic001G178500 Sobic001G304000--Sobic001G178500 Sobic007G206300 Sobic007G206300 Sobic001G304000--Sobic007G206300 Sobic001G304000--Sobic008G168200 Sobic003G049200 Sobic003G049200 Sobic010G133400--Sobic003G049200 Sobic010G133400--Sobic007G118500 Sobic010G133400--Sobic001G378800 Sobic008G072500 Sobic008G072500 Sobic010G133400--Sobic008G072500 Sobic004G263500 Sobic004G263500 Sobic010G133400--Sobic004G263500 Sobic010G133400--Sobic001G356100 Sobic010G133400--Sobic003G394500 Sobic010G133400--Sobic008G171400 Sobic002G193500 Sobic002G193500 Sobic010G133400--Sobic002G193500 Sobic001G047600 Sobic001G047600 Sobic003G156400--Sobic001G047600 Sobic006G012700 Sobic006G012700 Sobic003G156400--Sobic006G012700 Sobic003G156400--Sobic001G205100 Sobic008G097900 Sobic008G097900 Sobic003G156400--Sobic008G097900 Sobic003G156400--Sobic008G171400 Sobic003G156400--Sobic008G168200 Sobic001G253300 Sobic001G253300 Sobic003G156400--Sobic001G253300 Sobic003G156400--Sobic001G389200 Sobic003G365100 Sobic003G365100 Sobic003G156400--Sobic003G365100 Sobic001G205100--Sobic008G168200 Sobic001G205100--Sobic008G097900 Sobic001G205100--Sobic001G389200 Sobic001G205100--Sobic003G156400 Sobic003G021600 Sobic003G021600 Sobic001G205100--Sobic003G021600 Sobic001G205100--Sobic008G171400 Sobic001G205100--Sobic006G060000 Sobic004G130400 Sobic004G130400 Sobic001G205100--Sobic004G130400 Sobic003G397900 Sobic003G397900 Sobic001G205100--Sobic003G397900 Sobic009G260700--Sobic003G202100 Sobic009G260700--Sobic008G171400 Sobic009G260700--Sobic001G304000 Sobic009G260700--Sobic001G537100 Sobic009G260700--Sobic002G395500 Sobic006G220400 Sobic006G220400 Sobic009G260700--Sobic006G220400 Sobic009G260700--Sobic001G389200 Sobic009G260700--Sobic003G166500 Sobic009G260700--Sobic008G168200 Sobic008G168200--Sobic001G389200 Sobic008G168200--Sobic001G205100 Sobic008G168200--Sobic002G395500 Sobic008G168200--Sobic006G060000 Sobic008G168200--Sobic003G156400 Sobic008G168200--Sobic003G394500 Sobic008G168200--Sobic006G012700 Sobic008G168200--Sobic008G171400 Sobic003G409900 Sobic003G409900 Sobic008G168200--Sobic003G409900
Octagon: transcription factors


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