Gene annotation
Transcriptome id Sobic.003G213400.2,Sobic.003G213400.1,Sobic.003G213400.3
Synonym Sb03g027290
Functional annotation expressed protein
UniProt A0A1W0VYD8 , C5XQC2
Pfam -
Panther DB PTHR36712 PTHR36712:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14990 : -
RAP-DB (Rice) LOC_Os01g42120.1 : expressed protein
MaizeGDB (Corn) Zm00025a028651
Brachypodium KQK08644
Barley HORVU2Hr1G107110.1 , HORVU2Hr1G107110.2
Wheat TraesCS2D02G475000 , TraesCS2A02G474800 , TraesCS3D02G218500 , TraesCS3A02G216500 , TraesCS2B02G498400
Populus -


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cDNA sequences
Sobic.003G213400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G235100 HD domain containing protein 2, putative, expressed K07023: putative hydrolases of HD superfamily
2 Sobic.003G365100 hydrolase, alpha/beta fold family, putative, expressed -
3 Sobic.008G171400 phosphonate metabolism protein-related, putative, expressed -
4 Sobic.002G200000 zinc finger, C3HC4 type, putative, expressed -
5 Sobic.007G087000 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
6 Sobic.002G198100 pentatricopeptide, putative, expressed -
7 Sobic.002G084800 expressed protein -
8 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
9 Sobic.001G188400 tobamovirus multiplication protein, putative, expressed -
10 Sobic.001G292900 expressed protein -
11 Sobic.007G182000 hydroxymethylglutaryl-CoA synthase("PubMedID : 26759170,PubMedID : 24597475")@hydroxymethylglutaryl-CoA synthase, putative, expressed K01641: hydroxymethylglutaryl-CoA synthase
12 Sobic.006G115100 expressed protein -
13 Sobic.006G250800 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
14 Sobic.003G433400 OsDegp14 - Putative Deg protease homologue, expressed -
15 Sobic.009G026300 expressed protein K17815: exonuclease V
16 Sobic.010G133400 pantothenate kinase 4, putative, expressed -
17 Sobic.003G316200 transmembrane protein 49, putative, expressed -
18 Sobic.009G260700 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
19 Sobic.002G079000 expressed protein -
20 Sobic.001G253300 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1


Gene co-expression network
sample Sobic003G213400 Sobic003G213400 Sobic003G235100 Sobic003G235100 Sobic003G213400--Sobic003G235100 Sobic003G365100 Sobic003G365100 Sobic003G213400--Sobic003G365100 Sobic008G171400 Sobic008G171400 Sobic003G213400--Sobic008G171400 Sobic002G200000 Sobic002G200000 Sobic003G213400--Sobic002G200000 Sobic007G087000 Sobic007G087000 Sobic003G213400--Sobic007G087000 Sobic002G198100 Sobic002G198100 Sobic003G213400--Sobic002G198100 Sobic002G084800 Sobic002G084800 Sobic003G213400--Sobic002G084800 Sobic006G039400 Sobic006G039400 Sobic003G213400--Sobic006G039400 Sobic001G188400 Sobic001G188400 Sobic003G213400--Sobic001G188400 Sobic009G046900 Sobic009G046900 Sobic003G235100--Sobic009G046900 Sobic007G004300 Sobic007G004300 Sobic003G235100--Sobic007G004300 Sobic009G116900 Sobic009G116900 Sobic003G235100--Sobic009G116900 Sobic003G235100--Sobic002G084800 Sobic005G145201 Sobic005G145201 Sobic003G235100--Sobic005G145201 Sobic008G152700 Sobic008G152700 Sobic003G235100--Sobic008G152700 Sobic003G402800 Sobic003G402800 Sobic003G235100--Sobic003G402800 Sobic004G350700 Sobic004G350700 Sobic003G235100--Sobic004G350700 Sobic004G107100 Sobic004G107100 Sobic003G235100--Sobic004G107100 Sobic003G316200 Sobic003G316200 Sobic003G365100--Sobic003G316200 Sobic002G306100 Sobic002G306100 Sobic003G365100--Sobic002G306100 Sobic001G253300 Sobic001G253300 Sobic003G365100--Sobic001G253300 Sobic005G177700 Sobic005G177700 Sobic003G365100--Sobic005G177700 Sobic003G156400 Sobic003G156400 Sobic003G365100--Sobic003G156400 Sobic007G182000 Sobic007G182000 Sobic003G365100--Sobic007G182000 Sobic006G250800 Sobic006G250800 Sobic003G365100--Sobic006G250800 Sobic003G365100--Sobic001G188400 Sobic005G090300 Sobic005G090300 Sobic003G365100--Sobic005G090300 Sobic001G389200 Sobic001G389200 Sobic008G171400--Sobic001G389200 Sobic007G118500 Sobic007G118500 Sobic008G171400--Sobic007G118500 Sobic003G202100 Sobic003G202100 Sobic008G171400--Sobic003G202100 Sobic001G304000 Sobic001G304000 Sobic008G171400--Sobic001G304000 Sobic010G133400 Sobic010G133400 Sobic008G171400--Sobic010G133400 Sobic008G171400--Sobic003G156400 Sobic001G205100 Sobic001G205100 Sobic008G171400--Sobic001G205100 Sobic009G260700 Sobic009G260700 Sobic008G171400--Sobic009G260700 Sobic008G168200 Sobic008G168200 Sobic008G171400--Sobic008G168200 Sobic006G060000 Sobic006G060000 Sobic002G200000--Sobic006G060000 Sobic007G076400 Sobic007G076400 Sobic002G200000--Sobic007G076400 Sobic008G116700 Sobic008G116700 Sobic002G200000--Sobic008G116700 Sobic001G141400 Sobic001G141400 Sobic002G200000--Sobic001G141400 Sobic006G115100 Sobic006G115100 Sobic002G200000--Sobic006G115100 Sobic008G055500 Sobic008G055500 Sobic002G200000--Sobic008G055500 Sobic007G172700 Sobic007G172700 Sobic002G200000--Sobic007G172700 Sobic002G200000--Sobic007G087000 Sobic002G355800 Sobic002G355800 Sobic002G200000--Sobic002G355800 Sobic002G079000 Sobic002G079000 Sobic007G087000--Sobic002G079000 Sobic007G087000--Sobic007G076400 Sobic007G087000--Sobic002G306100 Sobic007G087000--Sobic008G116700 Sobic007G087000--Sobic006G250800 Sobic001G014200 Sobic001G014200 Sobic007G087000--Sobic001G014200 Sobic001G237600 Sobic001G237600 Sobic007G087000--Sobic001G237600 Sobic007G087000--Sobic007G172700 Sobic009G107300 Sobic009G107300 Sobic007G087000--Sobic009G107300 Sobic002G198100--Sobic009G116900 Sobic002G198100--Sobic003G235100 Sobic002G198100--Sobic006G115100 Sobic007G022600 Sobic007G022600 Sobic002G198100--Sobic007G022600 Sobic001G356100 Sobic001G356100 Sobic002G198100--Sobic001G356100 Sobic002G198100--Sobic002G084800 Sobic002G198100--Sobic002G200000 Sobic008G037700 Sobic008G037700 Sobic002G198100--Sobic008G037700 Sobic002G198100--Sobic003G213400 Sobic002G084800--Sobic007G076400 Sobic002G084800--Sobic003G235100 Sobic002G084800--Sobic006G250800 Sobic002G084800--Sobic007G172700 Sobic002G084800--Sobic002G079000 Sobic002G084800--Sobic007G087000 Sobic002G084800--Sobic001G188400 Sobic002G084800--Sobic008G037700 Sobic002G084800--Sobic009G116900 Sobic006G093300 Sobic006G093300 Sobic006G039400--Sobic006G093300 Sobic001G405600 Sobic001G405600 Sobic006G039400--Sobic001G405600 Sobic003G296900 Sobic003G296900 Sobic006G039400--Sobic003G296900 Sobic006G039400--Sobic001G237600 Sobic003G182300 Sobic003G182300 Sobic006G039400--Sobic003G182300 Sobic010G230600 Sobic010G230600 Sobic006G039400--Sobic010G230600 Sobic007G162100 Sobic007G162100 Sobic006G039400--Sobic007G162100 Sobic006G039400--Sobic007G087000 Sobic001G283600 Sobic001G283600 Sobic006G039400--Sobic001G283600 Sobic001G188400--Sobic006G115100 Sobic001G188400--Sobic001G253300 Sobic001G188400--Sobic003G316200 Sobic001G188400--Sobic006G250800 Sobic001G188400--Sobic007G004300 Sobic001G188400--Sobic002G079000 Sobic001G188400--Sobic002G355800 Sobic001G188400--Sobic002G084800 Sobic001G188400--Sobic008G055500
Octagon: transcription factors


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