Gene annotation
Transcriptome id Sobic.006G250800.3,Sobic.006G250800.1,Sobic.006G250800.2
Synonym Sb06g031570
Functional annotation ABC1 family domain containing protein, putative, expressed
UniProt A0A1Z5RGK3 , A0A1Z5RGE3 , C5Y9L4
Pfam PF03109
Panther DB PTHR10566 PTHR10566:SF93
NCBI CDD KOG1236; Predicted unusual protein kinase
KEGG Orthology K08869; ADCK, aarF domain-containing kinase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G11390 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os04g56510.1 : ABC1 family domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a009447
Brachypodium PNT62058 , PNT62059 , KQJ85093 , KQJ85094
Barley HORVU2Hr1G111050.2 , HORVU2Hr1G111050.3 , HORVU2Hr1G111050.1 , HORVU2Hr1G111050.8 , HORVU2Hr1G111050.6 , HORVU2Hr1G111050.7 , HORVU2Hr1G111050.4 , HORVU2Hr1G111050.5
Wheat TraesCS2B02G526900 , TraesCS2D02G499100 , TraesCS2A02G498800 , TraesCS6B02G178200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G079000 expressed protein -
2 Sobic.001G188400 tobamovirus multiplication protein, putative, expressed -
3 Sobic.009G217400 regulator of chromosome condensation, putative, expressed -
4 Sobic.003G316200 transmembrane protein 49, putative, expressed -
5 Sobic.002G084800 expressed protein -
6 Sobic.009G116900 CW-type Zinc Finger, putative, expressed -
7 Sobic.007G087000 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
8 Sobic.001G253300 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
9 Sobic.002G306100 ubiquinol-cytochrome C chaperone family protein, putative, expressed K17662: CBP3, cytochrome b pre-mRNA-processing protein 3
10 Sobic.002G307800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K01931: protein neuralized
11 Sobic.003G365100 hydrolase, alpha/beta fold family, putative, expressed -
12 Sobic.007G076400 expressed protein -
13 Sobic.001G342900 ubiquinone biosynthesis protein COQ9, mitochondrial precursor, putative, expressed K18587: ubiquinone biosynthesis protein COQ9
14 Sobic.006G115100 expressed protein -
15 Sobic.003G107500 expressed protein K10841: ERCC6, CSB, DNA excision repair protein ERCC-6
16 Sobic.002G252400 expressed protein K10706: SETX, senataxin
17 Sobic.007G172700 ECT5, putative, expressed -
18 Sobic.007G182000 hydroxymethylglutaryl-CoA synthase("PubMedID : 26759170,PubMedID : 24597475")@hydroxymethylglutaryl-CoA synthase, putative, expressed K01641: hydroxymethylglutaryl-CoA synthase
19 Sobic.003G310300 pentatricopeptide repeat domain containing protein, putative, expressed -
20 Sobic.003G092800 white-brown complex homolog protein 7, putative, expressed -


Gene co-expression network
sample Sobic006G250800 Sobic006G250800 Sobic002G079000 Sobic002G079000 Sobic006G250800--Sobic002G079000 Sobic001G188400 Sobic001G188400 Sobic006G250800--Sobic001G188400 Sobic009G217400 Sobic009G217400 Sobic006G250800--Sobic009G217400 Sobic003G316200 Sobic003G316200 Sobic006G250800--Sobic003G316200 Sobic002G084800 Sobic002G084800 Sobic006G250800--Sobic002G084800 Sobic009G116900 Sobic009G116900 Sobic006G250800--Sobic009G116900 Sobic007G087000 Sobic007G087000 Sobic006G250800--Sobic007G087000 Sobic001G253300 Sobic001G253300 Sobic006G250800--Sobic001G253300 Sobic002G306100 Sobic002G306100 Sobic006G250800--Sobic002G306100 Sobic002G079000--Sobic007G087000 Sobic010G169900 Sobic010G169900 Sobic002G079000--Sobic010G169900 Sobic010G213500 Sobic010G213500 Sobic002G079000--Sobic010G213500 Sobic004G198600 Sobic004G198600 Sobic002G079000--Sobic004G198600 Sobic006G128100 Sobic006G128100 Sobic002G079000--Sobic006G128100 Sobic002G079000--Sobic006G250800 Sobic007G172700 Sobic007G172700 Sobic002G079000--Sobic007G172700 Sobic001G237600 Sobic001G237600 Sobic002G079000--Sobic001G237600 Sobic001G490900 Sobic001G490900 Sobic002G079000--Sobic001G490900 Sobic006G115100 Sobic006G115100 Sobic001G188400--Sobic006G115100 Sobic001G188400--Sobic001G253300 Sobic001G188400--Sobic003G316200 Sobic001G188400--Sobic006G250800 Sobic007G004300 Sobic007G004300 Sobic001G188400--Sobic007G004300 Sobic001G188400--Sobic002G079000 Sobic002G355800 Sobic002G355800 Sobic001G188400--Sobic002G355800 Sobic001G188400--Sobic002G084800 Sobic008G055500 Sobic008G055500 Sobic001G188400--Sobic008G055500 Sobic007G182000 Sobic007G182000 Sobic009G217400--Sobic007G182000 Sobic009G217400--Sobic006G250800 Sobic002G307800 Sobic002G307800 Sobic009G217400--Sobic002G307800 Sobic003G433400 Sobic003G433400 Sobic009G217400--Sobic003G433400 Sobic009G217400--Sobic009G116900 Sobic003G092800 Sobic003G092800 Sobic009G217400--Sobic003G092800 Sobic009G217400--Sobic001G253300 Sobic001G257800 Sobic001G257800 Sobic009G217400--Sobic001G257800 Sobic002G180800 Sobic002G180800 Sobic009G217400--Sobic002G180800 Sobic003G316200--Sobic001G253300 Sobic005G177700 Sobic005G177700 Sobic003G316200--Sobic005G177700 Sobic003G365100 Sobic003G365100 Sobic003G316200--Sobic003G365100 Sobic003G316200--Sobic001G188400 Sobic003G316200--Sobic006G250800 Sobic004G078700 Sobic004G078700 Sobic003G316200--Sobic004G078700 Sobic003G316200--Sobic002G079000 Sobic003G316200--Sobic002G355800 Sobic003G114400 Sobic003G114400 Sobic003G316200--Sobic003G114400 Sobic007G076400 Sobic007G076400 Sobic002G084800--Sobic007G076400 Sobic003G235100 Sobic003G235100 Sobic002G084800--Sobic003G235100 Sobic002G084800--Sobic006G250800 Sobic002G084800--Sobic007G172700 Sobic002G084800--Sobic002G079000 Sobic002G084800--Sobic007G087000 Sobic002G084800--Sobic001G188400 Sobic008G037700 Sobic008G037700 Sobic002G084800--Sobic008G037700 Sobic002G084800--Sobic009G116900 Sobic009G116900--Sobic007G172700 Sobic009G116900--Sobic003G235100 Sobic009G116900--Sobic001G257800 Sobic009G116900--Sobic006G250800 Sobic004G350700 Sobic004G350700 Sobic009G116900--Sobic004G350700 Sobic001G404900 Sobic001G404900 Sobic009G116900--Sobic001G404900 Sobic009G116900--Sobic008G055500 Sobic008G152700 Sobic008G152700 Sobic009G116900--Sobic008G152700 Sobic002G198100 Sobic002G198100 Sobic009G116900--Sobic002G198100 Sobic007G087000--Sobic002G079000 Sobic007G087000--Sobic007G076400 Sobic007G087000--Sobic002G306100 Sobic008G116700 Sobic008G116700 Sobic007G087000--Sobic008G116700 Sobic007G087000--Sobic006G250800 Sobic001G014200 Sobic001G014200 Sobic007G087000--Sobic001G014200 Sobic007G087000--Sobic001G237600 Sobic007G087000--Sobic007G172700 Sobic009G107300 Sobic009G107300 Sobic007G087000--Sobic009G107300 Sobic001G253300--Sobic003G316200 Sobic001G253300--Sobic001G188400 Sobic001G253300--Sobic007G172700 Sobic008G097900 Sobic008G097900 Sobic001G253300--Sobic008G097900 Sobic001G253300--Sobic003G365100 Sobic001G253300--Sobic005G177700 Sobic001G253300--Sobic002G355800 Sobic001G253300--Sobic006G250800 Sobic009G162100 Sobic009G162100 Sobic001G253300--Sobic009G162100 Sobic002G306100--Sobic010G213500 Sobic002G306100--Sobic007G087000 Sobic002G306100--Sobic003G365100 Sobic002G306100--Sobic002G079000 Sobic002G306100--Sobic003G316200 Sobic002G306100--Sobic006G250800 Sobic002G306100--Sobic002G355800 Sobic003G181700 Sobic003G181700 Sobic002G306100--Sobic003G181700 Sobic002G306100--Sobic005G177700
Octagon: transcription factors


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