Gene annotation
Transcriptome id Sobic.001G188400.1,Sobic.001G188400.2
Synonym ATTOM1, TOM1, Sb01g016550
Functional annotation tobamovirus multiplication protein, putative, expressed
UniProt A0A1B6QJT4 , C5WV80
Pfam PF06454
Panther DB PTHR31142 PTHR31142:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G21790 : tobamovirus multiplication 1
RAP-DB (Rice) LOC_Os03g36790.1 : tobamovirus multiplication protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G115100 expressed protein -
2 Sobic.001G253300 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
3 Sobic.003G316200 transmembrane protein 49, putative, expressed -
4 Sobic.006G250800 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
5 Sobic.007G004300 phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed -
6 Sobic.002G079000 expressed protein -
7 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
8 Sobic.002G084800 expressed protein -
9 Sobic.008G055500 Protein-tyrosine phosphatase domain containing protein, expressed -
10 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
11 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
12 Sobic.007G172700 ECT5, putative, expressed -
13 Sobic.004G350700 kelch repeat protein, putative, expressed -
14 Sobic.002G200000 zinc finger, C3HC4 type, putative, expressed -
15 Sobic.007G087000 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
16 Sobic.003G365100 hydrolase, alpha/beta fold family, putative, expressed -
17 Sobic.007G076400 expressed protein -
18 Sobic.003G058500 expressed protein -
19 Sobic.003G202600 single myb histone, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.009G217400 regulator of chromosome condensation, putative, expressed -


Gene co-expression network
sample Sobic001G188400 Sobic001G188400 Sobic006G115100 Sobic006G115100 Sobic001G188400--Sobic006G115100 Sobic001G253300 Sobic001G253300 Sobic001G188400--Sobic001G253300 Sobic003G316200 Sobic003G316200 Sobic001G188400--Sobic003G316200 Sobic006G250800 Sobic006G250800 Sobic001G188400--Sobic006G250800 Sobic007G004300 Sobic007G004300 Sobic001G188400--Sobic007G004300 Sobic002G079000 Sobic002G079000 Sobic001G188400--Sobic002G079000 Sobic002G355800 Sobic002G355800 Sobic001G188400--Sobic002G355800 Sobic002G084800 Sobic002G084800 Sobic001G188400--Sobic002G084800 Sobic008G055500 Sobic008G055500 Sobic001G188400--Sobic008G055500 Sobic006G115100--Sobic001G188400 Sobic006G115100--Sobic007G004300 Sobic006G115100--Sobic008G055500 Sobic002G200000 Sobic002G200000 Sobic006G115100--Sobic002G200000 Sobic004G176200 Sobic004G176200 Sobic006G115100--Sobic004G176200 Sobic006G115100--Sobic001G253300 Sobic002G198100 Sobic002G198100 Sobic006G115100--Sobic002G198100 Sobic007G076400 Sobic007G076400 Sobic006G115100--Sobic007G076400 Sobic009G026300 Sobic009G026300 Sobic006G115100--Sobic009G026300 Sobic001G253300--Sobic003G316200 Sobic001G253300--Sobic001G188400 Sobic007G172700 Sobic007G172700 Sobic001G253300--Sobic007G172700 Sobic008G097900 Sobic008G097900 Sobic001G253300--Sobic008G097900 Sobic003G365100 Sobic003G365100 Sobic001G253300--Sobic003G365100 Sobic005G177700 Sobic005G177700 Sobic001G253300--Sobic005G177700 Sobic001G253300--Sobic002G355800 Sobic001G253300--Sobic006G250800 Sobic009G162100 Sobic009G162100 Sobic001G253300--Sobic009G162100 Sobic003G316200--Sobic001G253300 Sobic003G316200--Sobic005G177700 Sobic003G316200--Sobic003G365100 Sobic003G316200--Sobic001G188400 Sobic003G316200--Sobic006G250800 Sobic004G078700 Sobic004G078700 Sobic003G316200--Sobic004G078700 Sobic003G316200--Sobic002G079000 Sobic003G316200--Sobic002G355800 Sobic003G114400 Sobic003G114400 Sobic003G316200--Sobic003G114400 Sobic006G250800--Sobic002G079000 Sobic006G250800--Sobic001G188400 Sobic009G217400 Sobic009G217400 Sobic006G250800--Sobic009G217400 Sobic006G250800--Sobic003G316200 Sobic006G250800--Sobic002G084800 Sobic009G116900 Sobic009G116900 Sobic006G250800--Sobic009G116900 Sobic007G087000 Sobic007G087000 Sobic006G250800--Sobic007G087000 Sobic006G250800--Sobic001G253300 Sobic002G306100 Sobic002G306100 Sobic006G250800--Sobic002G306100 Sobic007G004300--Sobic004G176200 Sobic007G004300--Sobic006G115100 Sobic002G103800 Sobic002G103800 Sobic007G004300--Sobic002G103800 Sobic003G402800 Sobic003G402800 Sobic007G004300--Sobic003G402800 Sobic007G004300--Sobic008G055500 Sobic003G235100 Sobic003G235100 Sobic007G004300--Sobic003G235100 Sobic003G385300 Sobic003G385300 Sobic007G004300--Sobic003G385300 Sobic009G252200 Sobic009G252200 Sobic007G004300--Sobic009G252200 Sobic002G180800 Sobic002G180800 Sobic007G004300--Sobic002G180800 Sobic002G079000--Sobic007G087000 Sobic010G169900 Sobic010G169900 Sobic002G079000--Sobic010G169900 Sobic010G213500 Sobic010G213500 Sobic002G079000--Sobic010G213500 Sobic004G198600 Sobic004G198600 Sobic002G079000--Sobic004G198600 Sobic006G128100 Sobic006G128100 Sobic002G079000--Sobic006G128100 Sobic002G079000--Sobic006G250800 Sobic002G079000--Sobic007G172700 Sobic001G237600 Sobic001G237600 Sobic002G079000--Sobic001G237600 Sobic001G490900 Sobic001G490900 Sobic002G079000--Sobic001G490900 Sobic002G355800--Sobic010G169900 Sobic002G355800--Sobic007G172700 Sobic002G355800--Sobic006G128100 Sobic002G355800--Sobic010G213500 Sobic001G389200 Sobic001G389200 Sobic002G355800--Sobic001G389200 Sobic001G475300 Sobic001G475300 Sobic002G355800--Sobic001G475300 Sobic003G058500 Sobic003G058500 Sobic002G355800--Sobic003G058500 Sobic002G355800--Sobic009G162100 Sobic002G355800--Sobic005G177700 Sobic002G084800--Sobic007G076400 Sobic002G084800--Sobic003G235100 Sobic002G084800--Sobic006G250800 Sobic002G084800--Sobic007G172700 Sobic002G084800--Sobic002G079000 Sobic002G084800--Sobic007G087000 Sobic002G084800--Sobic001G188400 Sobic008G037700 Sobic008G037700 Sobic002G084800--Sobic008G037700 Sobic002G084800--Sobic009G116900 Sobic008G055500--Sobic003G402800 Sobic006G060000 Sobic006G060000 Sobic008G055500--Sobic006G060000 Sobic004G350700 Sobic004G350700 Sobic008G055500--Sobic004G350700 Sobic008G055500--Sobic003G385300 Sobic003G117800 Sobic003G117800 Sobic008G055500--Sobic003G117800 Sobic001G257800 Sobic001G257800 Sobic008G055500--Sobic001G257800 Sobic008G152700 Sobic008G152700 Sobic008G055500--Sobic008G152700 Sobic008G055500--Sobic004G176200 Sobic001G501900 Sobic001G501900 Sobic008G055500--Sobic001G501900
Octagon: transcription factors


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