Gene annotation
Transcriptome id Sobic.003G058500.1
Synonym Sb03g005010
Functional annotation expressed protein
UniProt C5XNL2
Pfam PF04190
Panther DB PTHR12875 PTHR12875:SF0
NCBI CDD KOG3024; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G63220 : -
RAP-DB (Rice) LOC_Os01g07100.1 : expressed protein
MaizeGDB (Corn) Zm00025a023334 , Zm00025a035675
Brachypodium KQK02828
Barley HORVU3Hr1G017970.8 , HORVU3Hr1G017970.1 , HORVU3Hr1G017970.3 , HORVU3Hr1G017970.2 , HORVU3Hr1G017970.5 , HORVU3Hr1G017970.4 , HORVU3Hr1G017970.7 , HORVU3Hr1G017970.6
Wheat TraesCS3A02G099600 , TraesCS3B02G116000 , TraesCS3D02G099900
Populus -


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cDNA sequences
Sobic.003G058500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G424800 myosin heavy chain-related, putative, expressed -
2 Sobic.010G181600 WD domain, G-beta repeat domain containing protein, expressed K13137: STRAP, serine-threonine kinase receptor-associated protein
3 Sobic.007G172700 ECT5, putative, expressed -
4 Sobic.001G047600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
5 Sobic.004G350700 kelch repeat protein, putative, expressed -
6 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
7 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II
8 Sobic.008G152700 expressed protein K07541: GPI mannosyltransferase 1 subunit X
9 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
10 Sobic.001G475300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
11 Sobic.004G004100 nucleic acid binding protein, putative, expressed -
12 Sobic.001G465400 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed K00658: DLST, 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
13 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
14 Sobic.009G162100 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
15 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
16 Sobic.003G160500 thiamin pyrophosphokinase 1, putative, expressed K00949: thiN, TPK1, thiamine pyrophosphokinase
17 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin
18 Sobic.001G356200 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
19 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
20 Sobic.001G501900 appr-1-p processing enzyme family protein, putative, expressed -


Gene co-expression network
sample Sobic003G058500 Sobic003G058500 Sobic001G424800 Sobic001G424800 Sobic003G058500--Sobic001G424800 Sobic010G181600 Sobic010G181600 Sobic003G058500--Sobic010G181600 Sobic007G172700 Sobic007G172700 Sobic003G058500--Sobic007G172700 Sobic001G047600 Sobic001G047600 Sobic003G058500--Sobic001G047600 Sobic004G350700 Sobic004G350700 Sobic003G058500--Sobic004G350700 Sobic002G355800 Sobic002G355800 Sobic003G058500--Sobic002G355800 Sobic001G378800 Sobic001G378800 Sobic003G058500--Sobic001G378800 Sobic008G152700 Sobic008G152700 Sobic003G058500--Sobic008G152700 Sobic003G117800 Sobic003G117800 Sobic003G058500--Sobic003G117800 Sobic001G424800--Sobic003G117800 Sobic001G424800--Sobic003G058500 Sobic001G424800--Sobic004G350700 Sobic001G356200 Sobic001G356200 Sobic001G424800--Sobic001G356200 Sobic001G149000 Sobic001G149000 Sobic001G424800--Sobic001G149000 Sobic001G280500 Sobic001G280500 Sobic001G424800--Sobic001G280500 Sobic003G394500 Sobic003G394500 Sobic001G424800--Sobic003G394500 Sobic003G385300 Sobic003G385300 Sobic001G424800--Sobic003G385300 Sobic001G424800--Sobic001G378800 Sobic010G181600--Sobic003G058500 Sobic010G181600--Sobic001G424800 Sobic010G181600--Sobic003G117800 Sobic001G475300 Sobic001G475300 Sobic010G181600--Sobic001G475300 Sobic008G006000 Sobic008G006000 Sobic010G181600--Sobic008G006000 Sobic003G353700 Sobic003G353700 Sobic010G181600--Sobic003G353700 Sobic007G218600 Sobic007G218600 Sobic010G181600--Sobic007G218600 Sobic004G004100 Sobic004G004100 Sobic010G181600--Sobic004G004100 Sobic003G250400 Sobic003G250400 Sobic010G181600--Sobic003G250400 Sobic006G060000 Sobic006G060000 Sobic007G172700--Sobic006G060000 Sobic007G172700--Sobic004G350700 Sobic007G172700--Sobic008G152700 Sobic003G190200 Sobic003G190200 Sobic007G172700--Sobic003G190200 Sobic007G172700--Sobic003G394500 Sobic007G172700--Sobic003G058500 Sobic007G172700--Sobic002G355800 Sobic007G172700--Sobic001G424800 Sobic007G030100 Sobic007G030100 Sobic007G172700--Sobic007G030100 Sobic004G093600 Sobic004G093600 Sobic001G047600--Sobic004G093600 Sobic001G047600--Sobic001G378800 Sobic001G047600--Sobic003G058500 Sobic003G034900 Sobic003G034900 Sobic001G047600--Sobic003G034900 Sobic006G012700 Sobic006G012700 Sobic001G047600--Sobic006G012700 SobicK043400 SobicK043400 Sobic001G047600--SobicK043400 Sobic003G156400 Sobic003G156400 Sobic001G047600--Sobic003G156400 Sobic001G465400 Sobic001G465400 Sobic001G047600--Sobic001G465400 Sobic007G118500 Sobic007G118500 Sobic001G047600--Sobic007G118500 Sobic008G055500 Sobic008G055500 Sobic004G350700--Sobic008G055500 Sobic004G350700--Sobic003G394500 Sobic004G350700--Sobic003G385300 Sobic004G350700--Sobic001G424800 Sobic004G350700--Sobic006G060000 Sobic004G350700--Sobic001G149000 Sobic004G350700--Sobic007G172700 Sobic001G114200 Sobic001G114200 Sobic004G350700--Sobic001G114200 Sobic004G350700--Sobic003G117800 Sobic010G169900 Sobic010G169900 Sobic002G355800--Sobic010G169900 Sobic002G355800--Sobic007G172700 Sobic006G128100 Sobic006G128100 Sobic002G355800--Sobic006G128100 Sobic010G213500 Sobic010G213500 Sobic002G355800--Sobic010G213500 Sobic001G389200 Sobic001G389200 Sobic002G355800--Sobic001G389200 Sobic002G355800--Sobic001G475300 Sobic002G355800--Sobic003G058500 Sobic009G162100 Sobic009G162100 Sobic002G355800--Sobic009G162100 Sobic005G177700 Sobic005G177700 Sobic002G355800--Sobic005G177700 Sobic006G232800 Sobic006G232800 Sobic001G378800--Sobic006G232800 Sobic001G378800--Sobic003G394500 Sobic001G378800--Sobic001G047600 Sobic004G077300 Sobic004G077300 Sobic001G378800--Sobic004G077300 Sobic001G378800--Sobic001G356200 Sobic003G372200 Sobic003G372200 Sobic001G378800--Sobic003G372200 Sobic001G378800--Sobic001G424800 Sobic003G260600 Sobic003G260600 Sobic001G378800--Sobic003G260600 Sobic001G378800--Sobic004G350700 Sobic008G152700--Sobic001G149000 Sobic008G152700--Sobic003G385300 Sobic008G152700--Sobic003G117800 Sobic008G152700--Sobic004G077300 Sobic009G046900 Sobic009G046900 Sobic008G152700--Sobic009G046900 Sobic008G152700--Sobic007G172700 Sobic003G428000 Sobic003G428000 Sobic008G152700--Sobic003G428000 Sobic008G152700--Sobic003G394500 Sobic001G385000 Sobic001G385000 Sobic008G152700--Sobic001G385000 Sobic003G117800--Sobic001G424800 Sobic003G117800--Sobic003G385300 Sobic003G117800--Sobic003G394500 Sobic001G057400 Sobic001G057400 Sobic003G117800--Sobic001G057400 Sobic003G117800--Sobic008G152700 Sobic003G117800--Sobic001G149000 Sobic003G117800--Sobic001G356200 Sobic003G117800--Sobic001G385000 Sobic003G117800--Sobic009G046900
Octagon: transcription factors


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