Gene annotation
Transcriptome id Sobic.003G160500.2,Sobic.003G160500.1
Synonym TPK1, Sb03g014340
Functional annotation thiamin pyrophosphokinase 1, putative, expressed
UniProt C5XJY7 , A0A1B6Q3K2
Pfam PF04265 PF04263
Panther DB PTHR13622 PTHR13622:SF6
NCBI CDD KOG3153; Thiamine pyrophosphokinase
KEGG Orthology K00949; thiN, TPK1, thiamine pyrophosphokinase
Gene Ontology GO:0009229; thiamine diphosphate biosynthetic process GO:0005524ATP binding GO:0004788thiamine diphosphokinase activity


Orthologs (automatic annotation)
TAIR AT1G02880 : thiamin pyrophosphokinase1
RAP-DB (Rice) LOC_Os01g25440.1 : thiamin pyrophosphokinase 1, putative, expressed
MaizeGDB (Corn) Zm00025a024509
Brachypodium PNT70480 , KQK04274 , KQK04272 , KQK04273 , PNT70479 , KQK04271
Barley HORVU2Hr1G017960.16 , HORVU2Hr1G017960.15 , HORVU2Hr1G017960.13 , HORVU2Hr1G017960.12 , HORVU2Hr1G017960.11 , HORVU2Hr1G017960.10 , HORVU2Hr1G017960.6 , HORVU2Hr1G017960.5 , HORVU2Hr1G017960.4 , HORVU2Hr1G017960.9 , HORVU2Hr1G017960.8 , HORVU2Hr1G017960.26 , HORVU2Hr1G017960.25 , HORVU2Hr1G017960.22 , HORVU2Hr1G017960.20 , HORVU2Hr1G017960.21
Wheat TraesCS2B02G123500 , TraesCS2D02G106300 , TraesCS2A02G106800
Populus -


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cDNA sequences
Sobic.003G160500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G058500 expressed protein -
2 Sobic.002G023100 heat shock protein DnaJ, putative, expressed -
3 Sobic.003G305900 expressed protein -
4 Sobic.001G399700 exonuclease, putative, expressed -
5 Sobic.001G501900 appr-1-p processing enzyme family protein, putative, expressed -
6 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II
7 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin
8 Sobic.010G160300 RNA recognition motif containing protein, putative, expressed -
9 Sobic.010G181600 WD domain, G-beta repeat domain containing protein, expressed K13137: STRAP, serine-threonine kinase receptor-associated protein
10 Sobic.001G047600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
11 Sobic.001G424800 myosin heavy chain-related, putative, expressed -
12 Sobic.004G000100 uridine/cytidine kinase-like 1, putative, expressed K00876: udk, uridine kinase
13 Sobic.003G022000 phospho-N-acetylmuramoyl-pentapeptide-transferase, putative, expressed K01000: phospho-N-acetylmuramoyl-pentapeptide-transferase
14 Sobic.002G304700 RFT1, putative, expressed K06316: oligosaccharide translocation protein RFT1
15 Sobic.002G397900 39S ribosomal protein L46, mitochondrial precursor, putative, expressed K17427: large subunit ribosomal protein L46
16 Sobic.007G086600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
17 Sobic.004G350700 kelch repeat protein, putative, expressed -
18 Sobic.008G152700 expressed protein K07541: GPI mannosyltransferase 1 subunit X
19 Sobic.004G093600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
20 Sobic.001G465400 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed K00658: DLST, 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)


Gene co-expression network
sample Sobic003G160500 Sobic003G160500 Sobic003G058500 Sobic003G058500 Sobic003G160500--Sobic003G058500 Sobic002G023100 Sobic002G023100 Sobic003G160500--Sobic002G023100 Sobic003G305900 Sobic003G305900 Sobic003G160500--Sobic003G305900 Sobic001G399700 Sobic001G399700 Sobic003G160500--Sobic001G399700 Sobic001G501900 Sobic001G501900 Sobic003G160500--Sobic001G501900 Sobic001G378800 Sobic001G378800 Sobic003G160500--Sobic001G378800 Sobic006G232800 Sobic006G232800 Sobic003G160500--Sobic006G232800 Sobic010G160300 Sobic010G160300 Sobic003G160500--Sobic010G160300 Sobic010G181600 Sobic010G181600 Sobic003G160500--Sobic010G181600 Sobic001G424800 Sobic001G424800 Sobic003G058500--Sobic001G424800 Sobic003G058500--Sobic010G181600 Sobic007G172700 Sobic007G172700 Sobic003G058500--Sobic007G172700 Sobic001G047600 Sobic001G047600 Sobic003G058500--Sobic001G047600 Sobic004G350700 Sobic004G350700 Sobic003G058500--Sobic004G350700 Sobic002G355800 Sobic002G355800 Sobic003G058500--Sobic002G355800 Sobic003G058500--Sobic001G378800 Sobic008G152700 Sobic008G152700 Sobic003G058500--Sobic008G152700 Sobic003G117800 Sobic003G117800 Sobic003G058500--Sobic003G117800 Sobic003G190600 Sobic003G190600 Sobic002G023100--Sobic003G190600 Sobic002G023100--Sobic003G160500 Sobic002G023100--Sobic003G305900 Sobic007G158900 Sobic007G158900 Sobic002G023100--Sobic007G158900 Sobic001G061200 Sobic001G061200 Sobic002G023100--Sobic001G061200 Sobic009G050500 Sobic009G050500 Sobic002G023100--Sobic009G050500 Sobic002G023100--Sobic003G058500 Sobic002G023100--Sobic010G181600 Sobic004G141400 Sobic004G141400 Sobic002G023100--Sobic004G141400 Sobic003G305900--Sobic003G160500 Sobic003G305900--Sobic002G023100 Sobic001G277300 Sobic001G277300 Sobic003G305900--Sobic001G277300 Sobic001G385000 Sobic001G385000 Sobic003G305900--Sobic001G385000 Sobic003G305900--Sobic010G181600 Sobic003G022000 Sobic003G022000 Sobic003G305900--Sobic003G022000 Sobic002G397900 Sobic002G397900 Sobic003G305900--Sobic002G397900 Sobic003G305900--Sobic003G117800 Sobic003G305900--Sobic010G160300 Sobic001G465400 Sobic001G465400 Sobic001G399700--Sobic001G465400 Sobic001G399700--Sobic003G160500 Sobic001G399700--Sobic002G355800 Sobic004G096700 Sobic004G096700 Sobic001G399700--Sobic004G096700 Sobic002G301100 Sobic002G301100 Sobic001G399700--Sobic002G301100 Sobic003G302200 Sobic003G302200 Sobic001G399700--Sobic003G302200 Sobic003G193500 Sobic003G193500 Sobic001G399700--Sobic003G193500 Sobic001G356100 Sobic001G356100 Sobic001G399700--Sobic001G356100 Sobic004G000100 Sobic004G000100 Sobic001G399700--Sobic004G000100 Sobic001G501900--Sobic004G350700 Sobic003G385300 Sobic003G385300 Sobic001G501900--Sobic003G385300 Sobic008G055500 Sobic008G055500 Sobic001G501900--Sobic008G055500 Sobic002G304700 Sobic002G304700 Sobic001G501900--Sobic002G304700 Sobic001G501900--Sobic010G160300 Sobic004G077300 Sobic004G077300 Sobic001G501900--Sobic004G077300 Sobic001G501900--Sobic001G424800 Sobic001G501900--Sobic008G152700 Sobic001G501900--Sobic003G117800 Sobic001G378800--Sobic006G232800 Sobic003G394500 Sobic003G394500 Sobic001G378800--Sobic003G394500 Sobic001G378800--Sobic001G047600 Sobic001G378800--Sobic004G077300 Sobic001G356200 Sobic001G356200 Sobic001G378800--Sobic001G356200 Sobic003G372200 Sobic003G372200 Sobic001G378800--Sobic003G372200 Sobic001G378800--Sobic001G424800 Sobic003G260600 Sobic003G260600 Sobic001G378800--Sobic003G260600 Sobic001G378800--Sobic004G350700 Sobic006G232800--Sobic001G378800 Sobic006G232800--Sobic001G385000 Sobic006G232800--Sobic003G394500 Sobic001G149000 Sobic001G149000 Sobic006G232800--Sobic001G149000 Sobic010G086300 Sobic010G086300 Sobic006G232800--Sobic010G086300 Sobic001G280500 Sobic001G280500 Sobic006G232800--Sobic001G280500 Sobic002G313100 Sobic002G313100 Sobic006G232800--Sobic002G313100 Sobic002G392400 Sobic002G392400 Sobic006G232800--Sobic002G392400 Sobic006G265800 Sobic006G265800 Sobic006G232800--Sobic006G265800 Sobic010G160300--Sobic002G304700 Sobic010G160300--Sobic001G280500 Sobic005G063200 Sobic005G063200 Sobic010G160300--Sobic005G063200 Sobic001G114200 Sobic001G114200 Sobic010G160300--Sobic001G114200 Sobic010G160300--Sobic001G501900 Sobic010G160300--Sobic004G350700 Sobic002G007800 Sobic002G007800 Sobic010G160300--Sobic002G007800 Sobic010G160300--Sobic003G117800 Sobic010G160300--Sobic001G149000 Sobic010G181600--Sobic003G058500 Sobic010G181600--Sobic001G424800 Sobic010G181600--Sobic003G117800 Sobic001G475300 Sobic001G475300 Sobic010G181600--Sobic001G475300 Sobic008G006000 Sobic008G006000 Sobic010G181600--Sobic008G006000 Sobic003G353700 Sobic003G353700 Sobic010G181600--Sobic003G353700 Sobic007G218600 Sobic007G218600 Sobic010G181600--Sobic007G218600 Sobic004G004100 Sobic004G004100 Sobic010G181600--Sobic004G004100 Sobic003G250400 Sobic003G250400 Sobic010G181600--Sobic003G250400
Octagon: transcription factors


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