Gene annotation
Transcriptome id Sobic.001G501900.2,Sobic.001G501900.1
Synonym Sb01g046880
Functional annotation appr-1-p processing enzyme family protein, putative, expressed
UniProt C5WXV8
Pfam PF00650 PF01661
Panther DB PTHR11106 PTHR11106:SF65
NCBI CDD KOG2633; Hismacro and SEC14 domain-containing proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G69340 : appr-1-p processing enzyme family protein
RAP-DB (Rice) LOC_Os10g30750.1 : appr-1-p processing enzyme family protein, putative, expressed
MaizeGDB (Corn) Zm00025a000685 , Zm00025a006771
Brachypodium KQJ96897 , KQK23624 , KQK23625
Barley HORVU1Hr1G037460.9 , HORVU1Hr1G037460.8 , HORVU1Hr1G037460.3 , HORVU1Hr1G037460.2 , HORVU1Hr1G037460.1 , HORVU1Hr1G037460.7 , HORVU1Hr1G037460.6 , HORVU1Hr1G037460.5 , HORVU1Hr1G037460.4 , HORVU4Hr1G083530.9 , HORVU1Hr1G037460.10 , HORVU4Hr1G083530.3 , HORVU4Hr1G083530.2 , HORVU4Hr1G083530.1 , HORVU4Hr1G083530.7 , HORVU4Hr1G083530.6 , HORVU4Hr1G083530.5 , HORVU4Hr1G083530.4 , HORVU1Hr1G037460.13 , HORVU1Hr1G037460.12 , HORVU1Hr1G037460.11 , HORVU4Hr1G083530.8 , HORVU1Hr1G037460.17 , HORVU1Hr1G037460.16 , HORVU1Hr1G037460.15 , HORVU1Hr1G037460.14 , HORVU4Hr1G083530.11 , HORVU4Hr1G083530.10
Wheat TraesCS1A02G141700 , TraesCS1A02G141700 , TraesCS4B02G317300 , TraesCS4B02G317300 , TraesCS4A02G416700 , TraesCS1B02G158300 , TraesCS1B02G158300 , TraesCS1B02G158300 , TraesCS1D02G140800 , TraesCS1D02G140800 , TraesCS1D02G140800 , TraesCS4D02G313900 , TraesCS4D02G313900 , TraesCS4D02G313900
Populus -


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cDNA sequences
Sobic.001G501900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G350700 kelch repeat protein, putative, expressed -
2 Sobic.003G385300 Ser/Thr protein phosphatase family protein, putative, expressed -
3 Sobic.008G055500 Protein-tyrosine phosphatase domain containing protein, expressed -
4 Sobic.002G304700 RFT1, putative, expressed K06316: oligosaccharide translocation protein RFT1
5 Sobic.010G160300 RNA recognition motif containing protein, putative, expressed -
6 Sobic.004G077300 guanine nucleotide exchange family protein, putative, expressed K18442: ARFGEF, brefeldin A-inhibited guanine nucleotide-exchange protein
7 Sobic.001G424800 myosin heavy chain-related, putative, expressed -
8 Sobic.008G152700 expressed protein K07541: GPI mannosyltransferase 1 subunit X
9 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
10 Sobic.003G402800 DUF647 domain containing protein, putative, expressed -
11 Sobic.001G149000 FAR1 family protein, expressed -
12 Sobic.001G114200 transmembrane anterior posterior transformation 1, putative, expressed -
13 Sobic.008G097900 protein kinase domain containing protein, expressed -
14 Sobic.002G007800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
15 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
16 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
17 Sobic.007G172700 ECT5, putative, expressed -
18 Sobic.002G057400 expressed protein K16586: HAUS augmin-like complex subunit 3
19 Sobic.001G280500 abscisic acid insensitive 8, putative, expressed -
20 Sobic.007G142600 DUF593 domain containing protein, expressed -


Gene co-expression network
sample Sobic001G501900 Sobic001G501900 Sobic004G350700 Sobic004G350700 Sobic001G501900--Sobic004G350700 Sobic003G385300 Sobic003G385300 Sobic001G501900--Sobic003G385300 Sobic008G055500 Sobic008G055500 Sobic001G501900--Sobic008G055500 Sobic002G304700 Sobic002G304700 Sobic001G501900--Sobic002G304700 Sobic010G160300 Sobic010G160300 Sobic001G501900--Sobic010G160300 Sobic004G077300 Sobic004G077300 Sobic001G501900--Sobic004G077300 Sobic001G424800 Sobic001G424800 Sobic001G501900--Sobic001G424800 Sobic008G152700 Sobic008G152700 Sobic001G501900--Sobic008G152700 Sobic003G117800 Sobic003G117800 Sobic001G501900--Sobic003G117800 Sobic004G350700--Sobic008G055500 Sobic003G394500 Sobic003G394500 Sobic004G350700--Sobic003G394500 Sobic004G350700--Sobic003G385300 Sobic004G350700--Sobic001G424800 Sobic006G060000 Sobic006G060000 Sobic004G350700--Sobic006G060000 Sobic001G149000 Sobic001G149000 Sobic004G350700--Sobic001G149000 Sobic007G172700 Sobic007G172700 Sobic004G350700--Sobic007G172700 Sobic001G114200 Sobic001G114200 Sobic004G350700--Sobic001G114200 Sobic004G350700--Sobic003G117800 Sobic003G385300--Sobic001G149000 Sobic003G402800 Sobic003G402800 Sobic003G385300--Sobic003G402800 Sobic003G385300--Sobic004G077300 Sobic004G064200 Sobic004G064200 Sobic003G385300--Sobic004G064200 Sobic004G176200 Sobic004G176200 Sobic003G385300--Sobic004G176200 Sobic001G257800 Sobic001G257800 Sobic003G385300--Sobic001G257800 Sobic005G225500 Sobic005G225500 Sobic003G385300--Sobic005G225500 Sobic007G039200 Sobic007G039200 Sobic003G385300--Sobic007G039200 Sobic002G074800 Sobic002G074800 Sobic003G385300--Sobic002G074800 Sobic008G055500--Sobic003G402800 Sobic008G055500--Sobic006G060000 Sobic008G055500--Sobic004G350700 Sobic008G055500--Sobic003G385300 Sobic008G055500--Sobic003G117800 Sobic008G055500--Sobic001G257800 Sobic008G055500--Sobic008G152700 Sobic008G055500--Sobic004G176200 Sobic008G055500--Sobic001G501900 Sobic002G304700--Sobic010G160300 Sobic006G156400 Sobic006G156400 Sobic002G304700--Sobic006G156400 Sobic001G280500 Sobic001G280500 Sobic002G304700--Sobic001G280500 Sobic002G304700--Sobic003G385300 Sobic002G304700--Sobic001G149000 Sobic002G304700--Sobic004G077300 Sobic002G007800 Sobic002G007800 Sobic002G304700--Sobic002G007800 Sobic009G106700 Sobic009G106700 Sobic002G304700--Sobic009G106700 Sobic005G063200 Sobic005G063200 Sobic002G304700--Sobic005G063200 Sobic010G160300--Sobic002G304700 Sobic010G160300--Sobic001G280500 Sobic010G160300--Sobic005G063200 Sobic010G160300--Sobic001G114200 Sobic010G160300--Sobic001G501900 Sobic010G160300--Sobic004G350700 Sobic010G160300--Sobic002G007800 Sobic010G160300--Sobic003G117800 Sobic010G160300--Sobic001G149000 Sobic004G077300--Sobic001G149000 Sobic004G077300--Sobic003G385300 Sobic004G077300--Sobic008G152700 Sobic004G077300--Sobic004G176200 Sobic001G378800 Sobic001G378800 Sobic004G077300--Sobic001G378800 Sobic006G080700 Sobic006G080700 Sobic004G077300--Sobic006G080700 Sobic001G384200 Sobic001G384200 Sobic004G077300--Sobic001G384200 Sobic004G077300--Sobic004G350700 Sobic002G180800 Sobic002G180800 Sobic004G077300--Sobic002G180800 Sobic001G424800--Sobic003G117800 Sobic003G058500 Sobic003G058500 Sobic001G424800--Sobic003G058500 Sobic001G424800--Sobic004G350700 Sobic001G356200 Sobic001G356200 Sobic001G424800--Sobic001G356200 Sobic001G424800--Sobic001G149000 Sobic001G424800--Sobic001G280500 Sobic001G424800--Sobic003G394500 Sobic001G424800--Sobic003G385300 Sobic001G424800--Sobic001G378800 Sobic008G152700--Sobic001G149000 Sobic008G152700--Sobic003G385300 Sobic008G152700--Sobic003G117800 Sobic008G152700--Sobic004G077300 Sobic009G046900 Sobic009G046900 Sobic008G152700--Sobic009G046900 Sobic008G152700--Sobic007G172700 Sobic003G428000 Sobic003G428000 Sobic008G152700--Sobic003G428000 Sobic008G152700--Sobic003G394500 Sobic001G385000 Sobic001G385000 Sobic008G152700--Sobic001G385000 Sobic003G117800--Sobic001G424800 Sobic003G117800--Sobic003G385300 Sobic003G117800--Sobic003G394500 Sobic001G057400 Sobic001G057400 Sobic003G117800--Sobic001G057400 Sobic003G117800--Sobic008G152700 Sobic003G117800--Sobic001G149000 Sobic003G117800--Sobic001G356200 Sobic003G117800--Sobic001G385000 Sobic003G117800--Sobic009G046900
Octagon: transcription factors


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