Gene annotation
Transcriptome id Sobic.007G142600.1
Synonym Sb07g021790
Functional annotation DUF593 domain containing protein, expressed
UniProt A0A1Z5R9X0
Pfam PF04576
Panther DB PTHR31422 PTHR31422:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G54740 : Protein of unknown function, DUF593
RAP-DB (Rice) LOC_Os08g34340.1 : DUF593 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005841
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G236000 CGMC_MAPKCMGC_2.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
2 Sobic.003G385300 Ser/Thr protein phosphatase family protein, putative, expressed -
3 Sobic.005G225500 expressed protein -
4 Sobic.003G024100 MRH1, putative, expressed -
5 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
6 Sobic.004G303000 DTA2, putative, expressed -
7 Sobic.009G113500 expressed protein -
8 Sobic.009G106700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
9 Sobic.007G039200 MYB family transcription factor, putative, expressed -
10 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
11 Sobic.008G159701 - -
12 Sobic.005G063200 expressed protein -
13 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
14 Sobic.001G340800 exocyst complex component 6, putative, expressed -
15 Sobic.001G405100 BTBT1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed -
16 Sobic.006G001100 ELMO/CED-12 family protein, putative, expressed -
17 Sobic.002G389600 transcription regulator, putative, expressed -
18 Sobic.010G134650 - -
19 Sobic.003G156900 expressed protein -
20 Sobic.002G074800 - -


Gene co-expression network
sample Sobic007G142600 Sobic007G142600 Sobic003G236000 Sobic003G236000 Sobic007G142600--Sobic003G236000 Sobic003G385300 Sobic003G385300 Sobic007G142600--Sobic003G385300 Sobic005G225500 Sobic005G225500 Sobic007G142600--Sobic005G225500 Sobic003G024100 Sobic003G024100 Sobic007G142600--Sobic003G024100 Sobic009G201000 Sobic009G201000 Sobic007G142600--Sobic009G201000 Sobic004G303000 Sobic004G303000 Sobic007G142600--Sobic004G303000 Sobic009G113500 Sobic009G113500 Sobic007G142600--Sobic009G113500 Sobic009G106700 Sobic009G106700 Sobic007G142600--Sobic009G106700 Sobic007G039200 Sobic007G039200 Sobic007G142600--Sobic007G039200 Sobic006G001100 Sobic006G001100 Sobic003G236000--Sobic006G001100 Sobic007G226700 Sobic007G226700 Sobic003G236000--Sobic007G226700 Sobic003G236000--Sobic005G225500 Sobic008G159701 Sobic008G159701 Sobic003G236000--Sobic008G159701 Sobic001G220500 Sobic001G220500 Sobic003G236000--Sobic001G220500 Sobic006G027601 Sobic006G027601 Sobic003G236000--Sobic006G027601 Sobic010G202200 Sobic010G202200 Sobic003G236000--Sobic010G202200 Sobic005G148950 Sobic005G148950 Sobic003G236000--Sobic005G148950 Sobic006G032000 Sobic006G032000 Sobic003G236000--Sobic006G032000 Sobic001G149000 Sobic001G149000 Sobic003G385300--Sobic001G149000 Sobic003G402800 Sobic003G402800 Sobic003G385300--Sobic003G402800 Sobic004G077300 Sobic004G077300 Sobic003G385300--Sobic004G077300 Sobic004G064200 Sobic004G064200 Sobic003G385300--Sobic004G064200 Sobic004G176200 Sobic004G176200 Sobic003G385300--Sobic004G176200 Sobic001G257800 Sobic001G257800 Sobic003G385300--Sobic001G257800 Sobic003G385300--Sobic005G225500 Sobic003G385300--Sobic007G039200 Sobic002G074800 Sobic002G074800 Sobic003G385300--Sobic002G074800 Sobic005G225500--Sobic006G001100 Sobic005G225500--Sobic008G159701 Sobic002G106600 Sobic002G106600 Sobic005G225500--Sobic002G106600 Sobic005G003700 Sobic005G003700 Sobic005G225500--Sobic005G003700 Sobic007G070900 Sobic007G070900 Sobic005G225500--Sobic007G070900 Sobic004G290600 Sobic004G290600 Sobic005G225500--Sobic004G290600 Sobic004G308800 Sobic004G308800 Sobic005G225500--Sobic004G308800 Sobic007G176900 Sobic007G176900 Sobic005G225500--Sobic007G176900 Sobic006G205400 Sobic006G205400 Sobic005G225500--Sobic006G205400 Sobic001G340800 Sobic001G340800 Sobic003G024100--Sobic001G340800 Sobic001G384200 Sobic001G384200 Sobic003G024100--Sobic001G384200 Sobic001G370400 Sobic001G370400 Sobic003G024100--Sobic001G370400 Sobic009G061500 Sobic009G061500 Sobic003G024100--Sobic009G061500 Sobic008G136601 Sobic008G136601 Sobic003G024100--Sobic008G136601 Sobic003G024100--Sobic006G001100 Sobic007G091400 Sobic007G091400 Sobic003G024100--Sobic007G091400 Sobic010G003200 Sobic010G003200 Sobic003G024100--Sobic010G003200 Sobic009G061601 Sobic009G061601 Sobic003G024100--Sobic009G061601 Sobic003G352900 Sobic003G352900 Sobic009G201000--Sobic003G352900 Sobic008G166100 Sobic008G166100 Sobic009G201000--Sobic008G166100 Sobic009G201000--Sobic001G384200 Sobic002G362500 Sobic002G362500 Sobic009G201000--Sobic002G362500 Sobic001G072000 Sobic001G072000 Sobic009G201000--Sobic001G072000 Sobic006G265800 Sobic006G265800 Sobic009G201000--Sobic006G265800 Sobic001G322400 Sobic001G322400 Sobic009G201000--Sobic001G322400 Sobic009G201000--Sobic007G039200 Sobic006G156400 Sobic006G156400 Sobic009G201000--Sobic006G156400 Sobic005G092100 Sobic005G092100 Sobic004G303000--Sobic005G092100 Sobic004G303000--Sobic008G159701 Sobic004G303000--Sobic006G032000 Sobic004G303000--Sobic010G003200 Sobic003G151400 Sobic003G151400 Sobic004G303000--Sobic003G151400 Sobic004G303000--Sobic007G226700 Sobic001G226600 Sobic001G226600 Sobic004G303000--Sobic001G226600 Sobic007G222200 Sobic007G222200 Sobic004G303000--Sobic007G222200 Sobic002G417401 Sobic002G417401 Sobic004G303000--Sobic002G417401 Sobic004G328500 Sobic004G328500 Sobic009G113500--Sobic004G328500 Sobic009G121200 Sobic009G121200 Sobic009G113500--Sobic009G121200 Sobic002G088600 Sobic002G088600 Sobic009G113500--Sobic002G088600 Sobic003G407700 Sobic003G407700 Sobic009G113500--Sobic003G407700 Sobic004G177900 Sobic004G177900 Sobic009G113500--Sobic004G177900 Sobic009G113500--Sobic004G290600 Sobic010G073900 Sobic010G073900 Sobic009G113500--Sobic010G073900 Sobic004G057300 Sobic004G057300 Sobic009G113500--Sobic004G057300 Sobic004G328200 Sobic004G328200 Sobic009G113500--Sobic004G328200 Sobic003G211800 Sobic003G211800 Sobic009G106700--Sobic003G211800 Sobic006G162500 Sobic006G162500 Sobic009G106700--Sobic006G162500 Sobic009G145000 Sobic009G145000 Sobic009G106700--Sobic009G145000 Sobic009G106700--Sobic004G328200 Sobic002G418300 Sobic002G418300 Sobic009G106700--Sobic002G418300 Sobic009G106700--Sobic009G113500 Sobic004G203150 Sobic004G203150 Sobic009G106700--Sobic004G203150 Sobic002G189500 Sobic002G189500 Sobic009G106700--Sobic002G189500 Sobic009G106700--Sobic005G225500 Sobic007G039200--Sobic001G340800 Sobic002G389600 Sobic002G389600 Sobic007G039200--Sobic002G389600 Sobic007G039200--Sobic009G061500 Sobic007G039200--Sobic008G136601 Sobic009G230800 Sobic009G230800 Sobic007G039200--Sobic009G230800 Sobic007G039200--Sobic004G290600 Sobic007G039200--Sobic008G166100 Sobic007G039200--Sobic001G384200 Sobic007G039200--Sobic008G159701
Octagon: transcription factors


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