Gene annotation
Transcriptome id Sobic.003G022000.2,Sobic.003G022000.1
Synonym Sb03g002070, ATTRANS11, TRANS11
Functional annotation phospho-N-acetylmuramoyl-pentapeptide-transferase, putative, expressed
UniProt A0A1B6Q0Y1 , A0A1W0VVI7
Pfam PF00953
Panther DB PTHR22926 PTHR22926:SF3
NCBI CDD -
KEGG Orthology K01000; phospho-N-acetylmuramoyl-pentapeptide-transferase
Gene Ontology GO:0016021; integral component of membrane GO:0008963phospho-N-acetylmuramoyl-pentapeptide-transferase activity


Orthologs (automatic annotation)
TAIR AT4G18270 : translocase 11
RAP-DB (Rice) LOC_Os01g11260.1 : phospho-N-acetylmuramoyl-pentapeptide-transferase, putative, expressed
MaizeGDB (Corn) Zm00025a022936
Brachypodium PNT70144 , PNT70145 , PNT70146
Barley HORVU3Hr1G028720.18 , HORVU3Hr1G028720.19 , HORVU3Hr1G028720.14 , HORVU3Hr1G028720.15 , HORVU3Hr1G028720.16 , HORVU3Hr1G028720.17 , HORVU3Hr1G028720.10 , HORVU3Hr1G028720.11 , HORVU3Hr1G028720.12 , HORVU3Hr1G028720.13 , HORVU3Hr1G028720.32 , HORVU3Hr1G028720.33 , HORVU3Hr1G028720.30 , HORVU3Hr1G028720.31 , HORVU3Hr1G028720.6 , HORVU3Hr1G028720.7 , HORVU3Hr1G028720.4 , HORVU3Hr1G028720.5 , HORVU3Hr1G028720.2 , HORVU3Hr1G028720.3 , HORVU3Hr1G028720.8 , HORVU3Hr1G028720.9 , HORVU3Hr1G028720.21 , HORVU3Hr1G028720.20 , HORVU3Hr1G028720.23 , HORVU3Hr1G028720.22 , HORVU3Hr1G028720.25 , HORVU3Hr1G028720.24 , HORVU3Hr1G028720.27 , HORVU3Hr1G028720.26 , HORVU3Hr1G028720.29 , HORVU3Hr1G028720.28
Wheat TraesCS3B02G167300 , TraesCS3D02G148400 , TraesCS3D02G148400 , TraesCS3A02G132100 , TraesCS3A02G132100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G167100 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
2 Sobic.007G086600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
3 Sobic.002G201700 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
4 Sobic.007G192500 nodulin, putative, expressed -
5 Sobic.002G309100 phosphate-induced protein 1 conserved region domain containing protein, expressed -
6 Sobic.001G499500 la domain containing protein, putative, expressed K18757: la-related protein 1
7 Sobic.001G385000 nucleoside-triphosphatase, putative, expressed K14641: apyrase
8 Sobic.001G117900 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
9 Sobic.009G025700 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase
10 Sobic.006G050100 expressed protein -
11 Sobic.003G372200 AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed K06276: 3-phosphoinositide dependent protein kinase-1
12 Sobic.010G062900 expressed protein -
13 Sobic.010G086300 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
14 Sobic.002G193500 malonyl-CoA decarboxylase, mitochondrial precursor, putative, expressed K01578: malonyl-CoA decarboxylase
15 Sobic.004G215200 expressed protein -
16 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin
17 Sobic.004G198300 expressed protein -
18 Sobic.009G163400 growth regulator related protein, putative, expressed -
19 Sobic.001G433600 - -
20 Sobic.005G210500 - K10901: BLM, RECQL3, bloom syndrome protein


Gene co-expression network
sample Sobic003G022000 Sobic003G022000 Sobic002G167100 Sobic002G167100 Sobic003G022000--Sobic002G167100 Sobic007G086600 Sobic007G086600 Sobic003G022000--Sobic007G086600 Sobic002G201700 Sobic002G201700 Sobic003G022000--Sobic002G201700 Sobic007G192500 Sobic007G192500 Sobic003G022000--Sobic007G192500 Sobic002G309100 Sobic002G309100 Sobic003G022000--Sobic002G309100 Sobic001G499500 Sobic001G499500 Sobic003G022000--Sobic001G499500 Sobic001G385000 Sobic001G385000 Sobic003G022000--Sobic001G385000 Sobic001G117900 Sobic001G117900 Sobic003G022000--Sobic001G117900 Sobic009G025700 Sobic009G025700 Sobic003G022000--Sobic009G025700 Sobic002G167100--Sobic002G201700 Sobic002G167100--Sobic003G022000 Sobic002G167100--Sobic009G025700 Sobic003G372200 Sobic003G372200 Sobic002G167100--Sobic003G372200 Sobic002G167100--Sobic007G192500 Sobic002G167100--Sobic001G385000 Sobic002G167100--Sobic007G086600 Sobic009G042000 Sobic009G042000 Sobic002G167100--Sobic009G042000 Sobic010G086300 Sobic010G086300 Sobic002G167100--Sobic010G086300 Sobic003G004800 Sobic003G004800 Sobic007G086600--Sobic003G004800 Sobic007G086600--Sobic001G117900 Sobic005G048600 Sobic005G048600 Sobic007G086600--Sobic005G048600 Sobic003G293400 Sobic003G293400 Sobic007G086600--Sobic003G293400 Sobic007G086600--Sobic003G022000 Sobic002G348400 Sobic002G348400 Sobic007G086600--Sobic002G348400 Sobic001G433600 Sobic001G433600 Sobic007G086600--Sobic001G433600 Sobic002G193500 Sobic002G193500 Sobic007G086600--Sobic002G193500 Sobic009G201000 Sobic009G201000 Sobic007G086600--Sobic009G201000 Sobic002G201700--Sobic002G167100 Sobic002G201700--Sobic009G025700 Sobic002G201700--Sobic007G192500 Sobic003G013700 Sobic003G013700 Sobic002G201700--Sobic003G013700 Sobic004G261800 Sobic004G261800 Sobic002G201700--Sobic004G261800 Sobic002G201700--Sobic009G042000 Sobic002G201700--Sobic003G022000 Sobic010G253200 Sobic010G253200 Sobic002G201700--Sobic010G253200 Sobic004G284800 Sobic004G284800 Sobic002G201700--Sobic004G284800 Sobic007G192500--Sobic002G201700 Sobic007G192500--Sobic002G167100 Sobic007G192500--Sobic002G309100 Sobic009G244900 Sobic009G244900 Sobic007G192500--Sobic009G244900 Sobic007G192500--Sobic003G022000 Sobic010G062900 Sobic010G062900 Sobic007G192500--Sobic010G062900 Sobic007G192500--Sobic009G025700 Sobic007G192500--Sobic001G499500 Sobic001G239900 Sobic001G239900 Sobic007G192500--Sobic001G239900 Sobic002G309100--Sobic010G062900 Sobic003G009000 Sobic003G009000 Sobic002G309100--Sobic003G009000 Sobic001G010500 Sobic001G010500 Sobic002G309100--Sobic001G010500 Sobic009G163400 Sobic009G163400 Sobic002G309100--Sobic009G163400 Sobic009G098700 Sobic009G098700 Sobic002G309100--Sobic009G098700 Sobic001G485700 Sobic001G485700 Sobic002G309100--Sobic001G485700 Sobic001G257650 Sobic001G257650 Sobic002G309100--Sobic001G257650 Sobic008G121501 Sobic008G121501 Sobic002G309100--Sobic008G121501 Sobic001G130600 Sobic001G130600 Sobic002G309100--Sobic001G130600 Sobic001G499500--Sobic010G062900 Sobic006G050100 Sobic006G050100 Sobic001G499500--Sobic006G050100 Sobic004G215200 Sobic004G215200 Sobic001G499500--Sobic004G215200 Sobic008G141100 Sobic008G141100 Sobic001G499500--Sobic008G141100 Sobic002G383700 Sobic002G383700 Sobic001G499500--Sobic002G383700 Sobic001G499500--Sobic007G086600 Sobic001G499500--Sobic003G022000 Sobic001G053350 Sobic001G053350 Sobic001G499500--Sobic001G053350 Sobic010G255400 Sobic010G255400 Sobic001G499500--Sobic010G255400 Sobic001G385000--Sobic010G086300 Sobic003G394500 Sobic003G394500 Sobic001G385000--Sobic003G394500 Sobic006G232800 Sobic006G232800 Sobic001G385000--Sobic006G232800 Sobic001G149000 Sobic001G149000 Sobic001G385000--Sobic001G149000 Sobic003G117800 Sobic003G117800 Sobic001G385000--Sobic003G117800 Sobic001G356200 Sobic001G356200 Sobic001G385000--Sobic001G356200 Sobic008G152700 Sobic008G152700 Sobic001G385000--Sobic008G152700 Sobic001G424800 Sobic001G424800 Sobic001G385000--Sobic001G424800 Sobic001G308500 Sobic001G308500 Sobic001G385000--Sobic001G308500 Sobic002G308000 Sobic002G308000 Sobic001G117900--Sobic002G308000 Sobic001G117900--Sobic001G433600 Sobic002G392400 Sobic002G392400 Sobic001G117900--Sobic002G392400 Sobic001G117900--Sobic007G086600 Sobic005G060100 Sobic005G060100 Sobic001G117900--Sobic005G060100 Sobic007G105700 Sobic007G105700 Sobic001G117900--Sobic007G105700 Sobic001G117900--Sobic002G348400 Sobic001G117900--Sobic009G025700 Sobic001G117900--Sobic003G004800 Sobic009G220700 Sobic009G220700 Sobic009G025700--Sobic009G220700 Sobic009G025700--Sobic002G201700 Sobic009G025700--Sobic002G167100 Sobic002G362500 Sobic002G362500 Sobic009G025700--Sobic002G362500 Sobic009G025700--Sobic006G050100 Sobic009G163100 Sobic009G163100 Sobic009G025700--Sobic009G163100 Sobic004G026600 Sobic004G026600 Sobic009G025700--Sobic004G026600 Sobic009G025700--Sobic002G309100 Sobic008G156600 Sobic008G156600 Sobic009G025700--Sobic008G156600
Octagon: transcription factors


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