Gene annotation
Transcriptome id Sobic.007G192500.1,Sobic.007G192500.2
Synonym Sb07g026140
Functional annotation nodulin, putative, expressed
UniProt A0A1B6PIY7 , C5YHS0
Pfam PF06813
Panther DB PTHR21576 PTHR21576:SF27 PTHR21576 PTHR21576:SF44
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G01930 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os08g42010.1 : nodulin, putative, expressed
MaizeGDB (Corn) Zm00025a011756 , Zm00025a005275 , Zm00025a030410 , Zm00025a055904
Brachypodium KQJ99135
Barley HORVU7Hr1G054500.1 , HORVU7Hr1G054500.2
Wheat TraesCS7D02G262200 , TraesCS7A02G262200 , TraesCS7A02G262200 , TraesCS7B02G159100
Populus PNT57925 , PNT57924


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cDNA sequences
Sobic.007G192500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G201700 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
2 Sobic.002G167100 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
3 Sobic.002G309100 phosphate-induced protein 1 conserved region domain containing protein, expressed -
4 Sobic.009G244900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cycloartenol-C-24-methyltransferase 1, putative, expressed K00559: SMT1, sterol 24-C-methyltransferase
5 Sobic.003G022000 phospho-N-acetylmuramoyl-pentapeptide-transferase, putative, expressed K01000: phospho-N-acetylmuramoyl-pentapeptide-transferase
6 Sobic.010G062900 expressed protein -
7 Sobic.009G025700 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase
8 Sobic.001G499500 la domain containing protein, putative, expressed K18757: la-related protein 1
9 Sobic.001G239900 amino acid permease, putative, expressed -
10 Sobic.004G215200 expressed protein -
11 Sobic.003G013700 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
12 Sobic.010G250300 ANTH/ENTH domain containing protein, putative, expressed -
13 Sobic.004G261800 sugar-responsive gene(PubMedID : 25496467)@pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
14 Sobic.001G183666 - -
15 Sobic.009G081800 helicase, putative, expressed K11273: DDX11, CHL1, chromosome transmission fidelity protein 1
16 Sobic.009G163400 growth regulator related protein, putative, expressed -
17 Sobic.003G293100 GATA zinc finger domain containing protein, expressed -
18 Sobic.009G042000 expressed protein -
19 Sobic.004G198300 expressed protein -
20 Sobic.007G086600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase


Gene co-expression network
sample Sobic007G192500 Sobic007G192500 Sobic002G201700 Sobic002G201700 Sobic007G192500--Sobic002G201700 Sobic002G167100 Sobic002G167100 Sobic007G192500--Sobic002G167100 Sobic002G309100 Sobic002G309100 Sobic007G192500--Sobic002G309100 Sobic009G244900 Sobic009G244900 Sobic007G192500--Sobic009G244900 Sobic003G022000 Sobic003G022000 Sobic007G192500--Sobic003G022000 Sobic010G062900 Sobic010G062900 Sobic007G192500--Sobic010G062900 Sobic009G025700 Sobic009G025700 Sobic007G192500--Sobic009G025700 Sobic001G499500 Sobic001G499500 Sobic007G192500--Sobic001G499500 Sobic001G239900 Sobic001G239900 Sobic007G192500--Sobic001G239900 Sobic002G201700--Sobic002G167100 Sobic002G201700--Sobic009G025700 Sobic002G201700--Sobic007G192500 Sobic003G013700 Sobic003G013700 Sobic002G201700--Sobic003G013700 Sobic004G261800 Sobic004G261800 Sobic002G201700--Sobic004G261800 Sobic009G042000 Sobic009G042000 Sobic002G201700--Sobic009G042000 Sobic002G201700--Sobic003G022000 Sobic010G253200 Sobic010G253200 Sobic002G201700--Sobic010G253200 Sobic004G284800 Sobic004G284800 Sobic002G201700--Sobic004G284800 Sobic002G167100--Sobic002G201700 Sobic002G167100--Sobic003G022000 Sobic002G167100--Sobic009G025700 Sobic003G372200 Sobic003G372200 Sobic002G167100--Sobic003G372200 Sobic002G167100--Sobic007G192500 Sobic001G385000 Sobic001G385000 Sobic002G167100--Sobic001G385000 Sobic007G086600 Sobic007G086600 Sobic002G167100--Sobic007G086600 Sobic002G167100--Sobic009G042000 Sobic010G086300 Sobic010G086300 Sobic002G167100--Sobic010G086300 Sobic002G309100--Sobic010G062900 Sobic003G009000 Sobic003G009000 Sobic002G309100--Sobic003G009000 Sobic001G010500 Sobic001G010500 Sobic002G309100--Sobic001G010500 Sobic009G163400 Sobic009G163400 Sobic002G309100--Sobic009G163400 Sobic009G098700 Sobic009G098700 Sobic002G309100--Sobic009G098700 Sobic001G485700 Sobic001G485700 Sobic002G309100--Sobic001G485700 Sobic001G257650 Sobic001G257650 Sobic002G309100--Sobic001G257650 Sobic008G121501 Sobic008G121501 Sobic002G309100--Sobic008G121501 Sobic001G130600 Sobic001G130600 Sobic002G309100--Sobic001G130600 Sobic009G244900--Sobic007G192500 Sobic009G244900--Sobic002G201700 Sobic009G244900--Sobic004G261800 Sobic010G101600 Sobic010G101600 Sobic009G244900--Sobic010G101600 Sobic009G244900--Sobic002G167100 Sobic002G153000 Sobic002G153000 Sobic009G244900--Sobic002G153000 Sobic001G135200 Sobic001G135200 Sobic009G244900--Sobic001G135200 Sobic010G250300 Sobic010G250300 Sobic009G244900--Sobic010G250300 Sobic004G069400 Sobic004G069400 Sobic009G244900--Sobic004G069400 Sobic003G022000--Sobic002G167100 Sobic003G022000--Sobic007G086600 Sobic003G022000--Sobic002G201700 Sobic003G022000--Sobic007G192500 Sobic003G022000--Sobic002G309100 Sobic003G022000--Sobic001G499500 Sobic003G022000--Sobic001G385000 Sobic001G117900 Sobic001G117900 Sobic003G022000--Sobic001G117900 Sobic003G022000--Sobic009G025700 Sobic010G062900--Sobic002G309100 Sobic010G062900--Sobic003G009000 Sobic010G062900--Sobic009G098700 Sobic010G073900 Sobic010G073900 Sobic010G062900--Sobic010G073900 Sobic010G062900--Sobic001G485700 Sobic001G183666 Sobic001G183666 Sobic010G062900--Sobic001G183666 Sobic006G239500 Sobic006G239500 Sobic010G062900--Sobic006G239500 Sobic010G062900--Sobic001G130600 Sobic010G005100 Sobic010G005100 Sobic010G062900--Sobic010G005100 Sobic009G220700 Sobic009G220700 Sobic009G025700--Sobic009G220700 Sobic009G025700--Sobic002G201700 Sobic009G025700--Sobic002G167100 Sobic002G362500 Sobic002G362500 Sobic009G025700--Sobic002G362500 Sobic006G050100 Sobic006G050100 Sobic009G025700--Sobic006G050100 Sobic009G163100 Sobic009G163100 Sobic009G025700--Sobic009G163100 Sobic004G026600 Sobic004G026600 Sobic009G025700--Sobic004G026600 Sobic009G025700--Sobic002G309100 Sobic008G156600 Sobic008G156600 Sobic009G025700--Sobic008G156600 Sobic001G499500--Sobic010G062900 Sobic001G499500--Sobic006G050100 Sobic004G215200 Sobic004G215200 Sobic001G499500--Sobic004G215200 Sobic008G141100 Sobic008G141100 Sobic001G499500--Sobic008G141100 Sobic002G383700 Sobic002G383700 Sobic001G499500--Sobic002G383700 Sobic001G499500--Sobic007G086600 Sobic001G499500--Sobic003G022000 Sobic001G053350 Sobic001G053350 Sobic001G499500--Sobic001G053350 Sobic010G255400 Sobic010G255400 Sobic001G499500--Sobic010G255400 Sobic001G239900--Sobic007G192500 Sobic009G081800 Sobic009G081800 Sobic001G239900--Sobic009G081800 Sobic006G126800 Sobic006G126800 Sobic001G239900--Sobic006G126800 Sobic001G239900--Sobic003G022000 Sobic009G103400 Sobic009G103400 Sobic001G239900--Sobic009G103400 Sobic001G239900--Sobic002G201700 Sobic001G239900--Sobic009G244900 Sobic002G310300 Sobic002G310300 Sobic001G239900--Sobic002G310300 Sobic001G239900--Sobic002G167100
Octagon: transcription factors


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