Gene annotation
Transcriptome id Sobic.001G047600.1
Synonym LTA3, Sb01g004375
Functional annotation 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed
UniProt A0A1B6QHB4
Pfam PF02817 PF00364 PF00198
Panther DB PTHR23151 PTHR23151:SF56
NCBI CDD KOG0557; Dihydrolipoamide acetyltransferase
KEGG Orthology K00627; DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
Gene Ontology GO:0016746; transferase activity, transferring acyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G52200 : Dihydrolipoamide acetyltransferase, long form protein
RAP-DB (Rice) LOC_Os06g30460.2 : 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a008655
Brachypodium KQJ95447
Barley HORVU7Hr1G072650.8 , HORVU7Hr1G072650.1 , HORVU7Hr1G072650.3 , HORVU7Hr1G072650.2 , HORVU7Hr1G072650.5 , HORVU7Hr1G072650.4 , HORVU7Hr1G072650.7 , HORVU7Hr1G072650.6
Wheat TraesCS7A02G305100 , TraesCS7D02G301900 , TraesCS7D02G301900 , TraesCS7D02G301900 , TraesCS7B02G205500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G093600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
2 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II
3 Sobic.003G058500 expressed protein -
4 Sobic.003G034900 mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed K01412: PMPCA, mitochondrial-processing peptidase subunit alpha
5 Sobic.006G012700 expressed protein -
6 Sobic.K043400 dnaJ homolog subfamily C member, putative, expressed K09523: DnaJ homolog subfamily C member 3
7 Sobic.003G156400 OsPDIL2-2 protein disulfide isomerase PDIL2-2, expressed K09584: PDIA6, protein disulfide-isomerase A6
8 Sobic.001G465400 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed K00658: DLST, 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
9 Sobic.007G118500 galactosyltransferase family protein, putative, expressed -
10 Sobic.003G129900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
11 Sobic.001G424800 myosin heavy chain-related, putative, expressed -
12 Sobic.002G395500 ATP12 ATPase, putative, expressed K07556: ATPeAF2, ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2
13 Sobic.009G162100 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
14 Sobic.001G356200 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
15 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
16 Sobic.007G172700 ECT5, putative, expressed -
17 Sobic.009G054600 -(PubMedID : 26976818)@dihydrolipoyl dehydrogenase, mitochondrial precursor, putative, expressed K00382: DLD, lpd, dihydrolipoamide dehydrogenase
18 Sobic.003G190600 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
19 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin
20 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1


Gene co-expression network
sample Sobic001G047600 Sobic001G047600 Sobic004G093600 Sobic004G093600 Sobic001G047600--Sobic004G093600 Sobic001G378800 Sobic001G378800 Sobic001G047600--Sobic001G378800 Sobic003G058500 Sobic003G058500 Sobic001G047600--Sobic003G058500 Sobic003G034900 Sobic003G034900 Sobic001G047600--Sobic003G034900 Sobic006G012700 Sobic006G012700 Sobic001G047600--Sobic006G012700 SobicK043400 SobicK043400 Sobic001G047600--SobicK043400 Sobic003G156400 Sobic003G156400 Sobic001G047600--Sobic003G156400 Sobic001G465400 Sobic001G465400 Sobic001G047600--Sobic001G465400 Sobic007G118500 Sobic007G118500 Sobic001G047600--Sobic007G118500 Sobic003G129900 Sobic003G129900 Sobic004G093600--Sobic003G129900 Sobic001G387200 Sobic001G387200 Sobic004G093600--Sobic001G387200 Sobic004G093600--Sobic001G047600 Sobic004G093600--Sobic003G034900 Sobic001G457000 Sobic001G457000 Sobic004G093600--Sobic001G457000 Sobic006G120900 Sobic006G120900 Sobic004G093600--Sobic006G120900 Sobic004G093600--Sobic001G378800 Sobic004G093600--Sobic006G012700 Sobic003G260600 Sobic003G260600 Sobic004G093600--Sobic003G260600 Sobic006G232800 Sobic006G232800 Sobic001G378800--Sobic006G232800 Sobic003G394500 Sobic003G394500 Sobic001G378800--Sobic003G394500 Sobic001G378800--Sobic001G047600 Sobic004G077300 Sobic004G077300 Sobic001G378800--Sobic004G077300 Sobic001G356200 Sobic001G356200 Sobic001G378800--Sobic001G356200 Sobic003G372200 Sobic003G372200 Sobic001G378800--Sobic003G372200 Sobic001G424800 Sobic001G424800 Sobic001G378800--Sobic001G424800 Sobic001G378800--Sobic003G260600 Sobic004G350700 Sobic004G350700 Sobic001G378800--Sobic004G350700 Sobic003G058500--Sobic001G424800 Sobic010G181600 Sobic010G181600 Sobic003G058500--Sobic010G181600 Sobic007G172700 Sobic007G172700 Sobic003G058500--Sobic007G172700 Sobic003G058500--Sobic001G047600 Sobic003G058500--Sobic004G350700 Sobic002G355800 Sobic002G355800 Sobic003G058500--Sobic002G355800 Sobic003G058500--Sobic001G378800 Sobic008G152700 Sobic008G152700 Sobic003G058500--Sobic008G152700 Sobic003G117800 Sobic003G117800 Sobic003G058500--Sobic003G117800 Sobic001G458800 Sobic001G458800 Sobic003G034900--Sobic001G458800 Sobic003G034900--Sobic001G465400 Sobic003G034900--Sobic004G093600 Sobic001G115700 Sobic001G115700 Sobic003G034900--Sobic001G115700 Sobic003G034900--Sobic001G047600 Sobic007G171500 Sobic007G171500 Sobic003G034900--Sobic007G171500 Sobic009G224400 Sobic009G224400 Sobic003G034900--Sobic009G224400 Sobic004G347600 Sobic004G347600 Sobic003G034900--Sobic004G347600 Sobic003G034900--Sobic001G457000 Sobic006G012700--Sobic001G465400 Sobic006G012700--Sobic001G378800 Sobic006G012700--Sobic004G093600 Sobic006G012700--Sobic001G047600 Sobic006G012700--Sobic003G156400 Sobic001G378200 Sobic001G378200 Sobic006G012700--Sobic001G378200 Sobic006G012700--Sobic003G034900 Sobic002G395500 Sobic002G395500 Sobic006G012700--Sobic002G395500 Sobic001G389200 Sobic001G389200 Sobic006G012700--Sobic001G389200 SobicK043400--Sobic001G378800 SobicK043400--Sobic001G047600 Sobic009G054600 Sobic009G054600 SobicK043400--Sobic009G054600 Sobic002G295700 Sobic002G295700 SobicK043400--Sobic002G295700 Sobic002G117600 Sobic002G117600 SobicK043400--Sobic002G117600 SobicK043400--Sobic006G012700 Sobic010G065200 Sobic010G065200 SobicK043400--Sobic010G065200 SobicK043400--Sobic004G093600 Sobic004G096700 Sobic004G096700 SobicK043400--Sobic004G096700 Sobic003G156400--Sobic001G047600 Sobic003G156400--Sobic006G012700 Sobic001G205100 Sobic001G205100 Sobic003G156400--Sobic001G205100 Sobic008G097900 Sobic008G097900 Sobic003G156400--Sobic008G097900 Sobic008G171400 Sobic008G171400 Sobic003G156400--Sobic008G171400 Sobic008G168200 Sobic008G168200 Sobic003G156400--Sobic008G168200 Sobic001G253300 Sobic001G253300 Sobic003G156400--Sobic001G253300 Sobic003G156400--Sobic001G389200 Sobic003G365100 Sobic003G365100 Sobic003G156400--Sobic003G365100 Sobic001G465400--Sobic003G034900 Sobic001G465400--Sobic006G012700 Sobic001G465400--Sobic001G115700 Sobic001G465400--Sobic001G378200 Sobic004G078700 Sobic004G078700 Sobic001G465400--Sobic004G078700 Sobic004G000100 Sobic004G000100 Sobic001G465400--Sobic004G000100 Sobic001G465400--Sobic001G047600 Sobic001G008100 Sobic001G008100 Sobic001G465400--Sobic001G008100 Sobic001G465400--Sobic004G347600 Sobic007G118500--Sobic003G394500 Sobic004G060300 Sobic004G060300 Sobic007G118500--Sobic004G060300 Sobic002G070300 Sobic002G070300 Sobic007G118500--Sobic002G070300 Sobic010G133400 Sobic010G133400 Sobic007G118500--Sobic010G133400 Sobic007G118500--Sobic001G378800 Sobic007G118500--Sobic006G232800 Sobic001G455000 Sobic001G455000 Sobic007G118500--Sobic001G455000 Sobic001G356100 Sobic001G356100 Sobic007G118500--Sobic001G356100 Sobic007G118500--Sobic008G171400
Octagon: transcription factors


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