Gene annotation
Transcriptome id Sobic.003G156400.1
Synonym ATPDI11, Sb03g013630, MEE30, ATPDIL2-1, PDI11, UNE5
Functional annotation OsPDIL2-2 protein disulfide isomerase PDIL2-2, expressed
UniProt C5XJT8
Pfam PF13098 PF07749
Panther DB PTHR18929 PTHR18929:SF91
NCBI CDD KOG0191; Thioredoxin/protein disulfide isomerase
KEGG Orthology K09584; PDIA6, protein disulfide-isomerase A6
Gene Ontology GO:0005783; endoplasmic reticulum


Orthologs (automatic annotation)
TAIR AT2G47470 : thioredoxin family protein
RAP-DB (Rice) LOC_Os01g23740.1 : OsPDIL2-2 protein disulfide isomerase PDIL2-2, expressed
MaizeGDB (Corn) Zm00025a029599 , Zm00025a006997 , Zm00025a042978 , Zm00025a024472 , Zm00025a046450
Brachypodium KQK04238 , KQK04239 , KQK07394
Barley HORVU1Hr1G022810.1 , HORVU1Hr1G022810.2
Wheat TraesCS1D02G106500 , TraesCS1A02G097700 , TraesCS1B02G126100
Populus -


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cDNA sequences
Sobic.003G156400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G047600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
2 Sobic.006G012700 expressed protein -
3 Sobic.001G205100 expressed protein -
4 Sobic.008G097900 protein kinase domain containing protein, expressed -
5 Sobic.008G171400 phosphonate metabolism protein-related, putative, expressed -
6 Sobic.008G168200 expressed protein -
7 Sobic.001G253300 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
8 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
9 Sobic.003G365100 hydrolase, alpha/beta fold family, putative, expressed -
10 Sobic.001G465400 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed K00658: DLST, 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
11 Sobic.004G093600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
12 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II
13 Sobic.K043400 dnaJ homolog subfamily C member, putative, expressed K09523: DnaJ homolog subfamily C member 3
14 Sobic.002G395500 ATP12 ATPase, putative, expressed K07556: ATPeAF2, ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2
15 Sobic.007G028500 expressed protein -
16 Sobic.003G316200 transmembrane protein 49, putative, expressed -
17 Sobic.001G188400 tobamovirus multiplication protein, putative, expressed -
18 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
19 Sobic.003G058500 expressed protein -
20 Sobic.003G034900 mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed K01412: PMPCA, mitochondrial-processing peptidase subunit alpha


Gene co-expression network
sample Sobic003G156400 Sobic003G156400 Sobic001G047600 Sobic001G047600 Sobic003G156400--Sobic001G047600 Sobic006G012700 Sobic006G012700 Sobic003G156400--Sobic006G012700 Sobic001G205100 Sobic001G205100 Sobic003G156400--Sobic001G205100 Sobic008G097900 Sobic008G097900 Sobic003G156400--Sobic008G097900 Sobic008G171400 Sobic008G171400 Sobic003G156400--Sobic008G171400 Sobic008G168200 Sobic008G168200 Sobic003G156400--Sobic008G168200 Sobic001G253300 Sobic001G253300 Sobic003G156400--Sobic001G253300 Sobic001G389200 Sobic001G389200 Sobic003G156400--Sobic001G389200 Sobic003G365100 Sobic003G365100 Sobic003G156400--Sobic003G365100 Sobic004G093600 Sobic004G093600 Sobic001G047600--Sobic004G093600 Sobic001G378800 Sobic001G378800 Sobic001G047600--Sobic001G378800 Sobic003G058500 Sobic003G058500 Sobic001G047600--Sobic003G058500 Sobic003G034900 Sobic003G034900 Sobic001G047600--Sobic003G034900 Sobic001G047600--Sobic006G012700 SobicK043400 SobicK043400 Sobic001G047600--SobicK043400 Sobic001G047600--Sobic003G156400 Sobic001G465400 Sobic001G465400 Sobic001G047600--Sobic001G465400 Sobic007G118500 Sobic007G118500 Sobic001G047600--Sobic007G118500 Sobic006G012700--Sobic001G465400 Sobic006G012700--Sobic001G378800 Sobic006G012700--Sobic004G093600 Sobic006G012700--Sobic001G047600 Sobic006G012700--Sobic003G156400 Sobic001G378200 Sobic001G378200 Sobic006G012700--Sobic001G378200 Sobic006G012700--Sobic003G034900 Sobic002G395500 Sobic002G395500 Sobic006G012700--Sobic002G395500 Sobic006G012700--Sobic001G389200 Sobic001G205100--Sobic008G168200 Sobic001G205100--Sobic008G097900 Sobic001G205100--Sobic001G389200 Sobic001G205100--Sobic003G156400 Sobic003G021600 Sobic003G021600 Sobic001G205100--Sobic003G021600 Sobic001G205100--Sobic008G171400 Sobic006G060000 Sobic006G060000 Sobic001G205100--Sobic006G060000 Sobic004G130400 Sobic004G130400 Sobic001G205100--Sobic004G130400 Sobic003G397900 Sobic003G397900 Sobic001G205100--Sobic003G397900 Sobic007G172700 Sobic007G172700 Sobic008G097900--Sobic007G172700 Sobic008G152700 Sobic008G152700 Sobic008G097900--Sobic008G152700 Sobic004G350700 Sobic004G350700 Sobic008G097900--Sobic004G350700 Sobic001G411900 Sobic001G411900 Sobic008G097900--Sobic001G411900 Sobic008G097900--Sobic001G205100 Sobic004G077300 Sobic004G077300 Sobic008G097900--Sobic004G077300 Sobic001G501900 Sobic001G501900 Sobic008G097900--Sobic001G501900 Sobic008G097900--Sobic001G253300 Sobic002G117600 Sobic002G117600 Sobic008G097900--Sobic002G117600 Sobic008G171400--Sobic001G389200 Sobic008G171400--Sobic007G118500 Sobic003G202100 Sobic003G202100 Sobic008G171400--Sobic003G202100 Sobic001G304000 Sobic001G304000 Sobic008G171400--Sobic001G304000 Sobic010G133400 Sobic010G133400 Sobic008G171400--Sobic010G133400 Sobic008G171400--Sobic003G156400 Sobic008G171400--Sobic001G205100 Sobic009G260700 Sobic009G260700 Sobic008G171400--Sobic009G260700 Sobic008G171400--Sobic008G168200 Sobic008G168200--Sobic001G389200 Sobic008G168200--Sobic001G205100 Sobic008G168200--Sobic002G395500 Sobic008G168200--Sobic006G060000 Sobic008G168200--Sobic003G156400 Sobic003G394500 Sobic003G394500 Sobic008G168200--Sobic003G394500 Sobic008G168200--Sobic006G012700 Sobic008G168200--Sobic008G171400 Sobic003G409900 Sobic003G409900 Sobic008G168200--Sobic003G409900 Sobic003G316200 Sobic003G316200 Sobic001G253300--Sobic003G316200 Sobic001G188400 Sobic001G188400 Sobic001G253300--Sobic001G188400 Sobic001G253300--Sobic007G172700 Sobic001G253300--Sobic008G097900 Sobic001G253300--Sobic003G365100 Sobic005G177700 Sobic005G177700 Sobic001G253300--Sobic005G177700 Sobic002G355800 Sobic002G355800 Sobic001G253300--Sobic002G355800 Sobic006G250800 Sobic006G250800 Sobic001G253300--Sobic006G250800 Sobic009G162100 Sobic009G162100 Sobic001G253300--Sobic009G162100 Sobic001G389200--Sobic006G060000 Sobic001G389200--Sobic008G168200 Sobic001G389200--Sobic002G395500 Sobic001G389200--Sobic002G355800 Sobic004G254800 Sobic004G254800 Sobic001G389200--Sobic004G254800 Sobic004G078700 Sobic004G078700 Sobic001G389200--Sobic004G078700 Sobic001G389200--Sobic007G172700 Sobic010G169900 Sobic010G169900 Sobic001G389200--Sobic010G169900 Sobic009G122500 Sobic009G122500 Sobic001G389200--Sobic009G122500 Sobic003G365100--Sobic003G316200 Sobic002G306100 Sobic002G306100 Sobic003G365100--Sobic002G306100 Sobic003G365100--Sobic001G253300 Sobic003G365100--Sobic005G177700 Sobic003G365100--Sobic003G156400 Sobic007G182000 Sobic007G182000 Sobic003G365100--Sobic007G182000 Sobic003G365100--Sobic006G250800 Sobic003G365100--Sobic001G188400 Sobic005G090300 Sobic005G090300 Sobic003G365100--Sobic005G090300
Octagon: transcription factors


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