Gene annotation
Transcriptome id Sobic.007G028500.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PFJ6
Pfam PF14712
Panther DB PTHR31305
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006886; intracellular protein transport


Orthologs (automatic annotation)
TAIR AT1G79070 : SNARE-associated protein-related
RAP-DB (Rice) LOC_Os08g03590.1 : expressed protein
MaizeGDB (Corn) Zm00025a030179
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G028500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G395500 ATP12 ATPase, putative, expressed K07556: ATPeAF2, ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2
2 Sobic.002G238400 expressed protein -
3 Sobic.003G156400 OsPDIL2-2 protein disulfide isomerase PDIL2-2, expressed K09584: PDIA6, protein disulfide-isomerase A6
4 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
5 Sobic.004G186900 RNA recognition motif containing protein, putative, expressed -
6 Sobic.002G200000 zinc finger, C3HC4 type, putative, expressed -
7 Sobic.006G012700 expressed protein -
8 Sobic.008G087900 expressed protein -
9 Sobic.001G465400 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed K00658: DLST, 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
10 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
11 Sobic.009G162100 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
12 Sobic.001G188400 tobamovirus multiplication protein, putative, expressed -
13 Sobic.008G171400 phosphonate metabolism protein-related, putative, expressed -
14 Sobic.002G047500 galactose-1-phosphate uridyl transferase, putative, expressed K00965: galT, UDPglucose--hexose-1-phosphate uridylyltransferase
15 Sobic.003G202600 single myb histone, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -
17 Sobic.003G190600 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
18 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
19 Sobic.006G115100 expressed protein -
20 Sobic.005G018800 expressed protein -


Gene co-expression network
sample Sobic007G028500 Sobic007G028500 Sobic002G395500 Sobic002G395500 Sobic007G028500--Sobic002G395500 Sobic002G238400 Sobic002G238400 Sobic007G028500--Sobic002G238400 Sobic003G156400 Sobic003G156400 Sobic007G028500--Sobic003G156400 Sobic002G355800 Sobic002G355800 Sobic007G028500--Sobic002G355800 Sobic004G186900 Sobic004G186900 Sobic007G028500--Sobic004G186900 Sobic002G200000 Sobic002G200000 Sobic007G028500--Sobic002G200000 Sobic006G012700 Sobic006G012700 Sobic007G028500--Sobic006G012700 Sobic008G087900 Sobic008G087900 Sobic007G028500--Sobic008G087900 Sobic001G465400 Sobic001G465400 Sobic007G028500--Sobic001G465400 Sobic001G389200 Sobic001G389200 Sobic002G395500--Sobic001G389200 Sobic008G168200 Sobic008G168200 Sobic002G395500--Sobic008G168200 Sobic003G394500 Sobic003G394500 Sobic002G395500--Sobic003G394500 Sobic002G395500--Sobic007G028500 Sobic003G190600 Sobic003G190600 Sobic002G395500--Sobic003G190600 Sobic002G395500--Sobic006G012700 Sobic001G047600 Sobic001G047600 Sobic002G395500--Sobic001G047600 Sobic004G254800 Sobic004G254800 Sobic002G395500--Sobic004G254800 Sobic006G060000 Sobic006G060000 Sobic002G395500--Sobic006G060000 Sobic002G238400--Sobic007G028500 Sobic002G238400--Sobic001G389200 Sobic002G238400--Sobic002G395500 Sobic002G238400--Sobic008G168200 Sobic006G277000 Sobic006G277000 Sobic002G238400--Sobic006G277000 Sobic001G332300 Sobic001G332300 Sobic002G238400--Sobic001G332300 Sobic003G202600 Sobic003G202600 Sobic002G238400--Sobic003G202600 Sobic002G294100 Sobic002G294100 Sobic002G238400--Sobic002G294100 Sobic001G358500 Sobic001G358500 Sobic002G238400--Sobic001G358500 Sobic003G156400--Sobic001G047600 Sobic003G156400--Sobic006G012700 Sobic001G205100 Sobic001G205100 Sobic003G156400--Sobic001G205100 Sobic008G097900 Sobic008G097900 Sobic003G156400--Sobic008G097900 Sobic008G171400 Sobic008G171400 Sobic003G156400--Sobic008G171400 Sobic003G156400--Sobic008G168200 Sobic001G253300 Sobic001G253300 Sobic003G156400--Sobic001G253300 Sobic003G156400--Sobic001G389200 Sobic003G365100 Sobic003G365100 Sobic003G156400--Sobic003G365100 Sobic010G169900 Sobic010G169900 Sobic002G355800--Sobic010G169900 Sobic007G172700 Sobic007G172700 Sobic002G355800--Sobic007G172700 Sobic006G128100 Sobic006G128100 Sobic002G355800--Sobic006G128100 Sobic010G213500 Sobic010G213500 Sobic002G355800--Sobic010G213500 Sobic002G355800--Sobic001G389200 Sobic001G475300 Sobic001G475300 Sobic002G355800--Sobic001G475300 Sobic003G058500 Sobic003G058500 Sobic002G355800--Sobic003G058500 Sobic009G162100 Sobic009G162100 Sobic002G355800--Sobic009G162100 Sobic005G177700 Sobic005G177700 Sobic002G355800--Sobic005G177700 Sobic004G186900--Sobic001G465400 Sobic004G186900--Sobic002G395500 Sobic004G186900--Sobic007G028500 Sobic003G202100 Sobic003G202100 Sobic004G186900--Sobic003G202100 Sobic004G186900--Sobic001G389200 Sobic003G304400 Sobic003G304400 Sobic004G186900--Sobic003G304400 Sobic004G186900--Sobic008G168200 Sobic006G106300 Sobic006G106300 Sobic004G186900--Sobic006G106300 Sobic004G186900--Sobic006G012700 Sobic002G200000--Sobic006G060000 Sobic007G076400 Sobic007G076400 Sobic002G200000--Sobic007G076400 Sobic008G116700 Sobic008G116700 Sobic002G200000--Sobic008G116700 Sobic001G141400 Sobic001G141400 Sobic002G200000--Sobic001G141400 Sobic006G115100 Sobic006G115100 Sobic002G200000--Sobic006G115100 Sobic008G055500 Sobic008G055500 Sobic002G200000--Sobic008G055500 Sobic002G200000--Sobic007G172700 Sobic007G087000 Sobic007G087000 Sobic002G200000--Sobic007G087000 Sobic002G200000--Sobic002G355800 Sobic006G012700--Sobic001G465400 Sobic001G378800 Sobic001G378800 Sobic006G012700--Sobic001G378800 Sobic004G093600 Sobic004G093600 Sobic006G012700--Sobic004G093600 Sobic006G012700--Sobic001G047600 Sobic006G012700--Sobic003G156400 Sobic001G378200 Sobic001G378200 Sobic006G012700--Sobic001G378200 Sobic003G034900 Sobic003G034900 Sobic006G012700--Sobic003G034900 Sobic006G012700--Sobic002G395500 Sobic006G012700--Sobic001G389200 Sobic006G160100 Sobic006G160100 Sobic008G087900--Sobic006G160100 Sobic001G434200 Sobic001G434200 Sobic008G087900--Sobic001G434200 Sobic005G111900 Sobic005G111900 Sobic008G087900--Sobic005G111900 Sobic008G087900--Sobic007G028500 Sobic002G181600 Sobic002G181600 Sobic008G087900--Sobic002G181600 Sobic002G047500 Sobic002G047500 Sobic008G087900--Sobic002G047500 Sobic006G274800 Sobic006G274800 Sobic008G087900--Sobic006G274800 Sobic006G039400 Sobic006G039400 Sobic008G087900--Sobic006G039400 Sobic001G412100 Sobic001G412100 Sobic008G087900--Sobic001G412100 Sobic001G465400--Sobic003G034900 Sobic001G465400--Sobic006G012700 Sobic001G115700 Sobic001G115700 Sobic001G465400--Sobic001G115700 Sobic001G465400--Sobic001G378200 Sobic004G078700 Sobic004G078700 Sobic001G465400--Sobic004G078700 Sobic004G000100 Sobic004G000100 Sobic001G465400--Sobic004G000100 Sobic001G465400--Sobic001G047600 Sobic001G008100 Sobic001G008100 Sobic001G465400--Sobic001G008100 Sobic004G347600 Sobic004G347600 Sobic001G465400--Sobic004G347600
Octagon: transcription factors


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