Gene annotation
Transcriptome id Sobic.008G087900.1
Synonym Sb08g009421
Functional annotation expressed protein
UniProt A0A1B6PCI2
Pfam PF02410
Panther DB PTHR21043
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67620 : Lojap-related protein
RAP-DB (Rice) LOC_Os12g13824.2 : expressed protein
MaizeGDB (Corn) Zm00025a024986
Brachypodium KQJ91748
Barley HORVU5Hr1G093300.1 , HORVU5Hr1G093300.2
Wheat TraesCS5D02G386400 , TraesCS5A02G376400 , TraesCS5B02G380000 , TraesCS5B02G380000
Populus -


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cDNA sequences
Sobic.008G087900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G160100 EF hand family protein, expressed -
2 Sobic.001G434200 AGAP008572-PA, putative, expressed K17796: mitochondrial import inner membrane translocase subunit TIM21
3 Sobic.005G111900 uncharacterized protein family UPF0016 domain containing protein, expressed -
4 Sobic.007G028500 expressed protein -
5 Sobic.002G181600 expressed protein -
6 Sobic.002G047500 galactose-1-phosphate uridyl transferase, putative, expressed K00965: galT, UDPglucose--hexose-1-phosphate uridylyltransferase
7 Sobic.006G274800 hydrolase, NUDIX family, domain containing protein, expressed -
8 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
9 Sobic.001G412100 CDP-alcohol phosphatidyltransferase, putative, expressed K00995: pgsA, CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase
10 Sobic.002G238400 expressed protein -
11 Sobic.001G207500 ZOS10-06 - C2H2 zinc finger protein, expressed K15685: E3 ubiquitin-protein ligase Hakai
12 Sobic.009G192000 transcription initiation factor IIF beta subunit, putative, expressed K03139: TFIIF2, GTF2F2, transcription initiation factor TFIIF subunit beta
13 Sobic.001G464400 expressed protein -
14 Sobic.008G048300 transcription elongation factor protein, putative, expressed -
15 Sobic.003G202100 Uncharacterized ACR, COG1565 containing protein, putative, expressed K18164: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
16 Sobic.003G392600 expressed protein -
17 Sobic.003G200800 vacuolar ATP synthase subunit d, putative, expressed K02146: ATPeV0D, V-type H+-transporting ATPase subunit d
18 Sobic.004G136500 - -
19 Sobic.001G304000 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
20 Sobic.003G167900 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -


Gene co-expression network
sample Sobic008G087900 Sobic008G087900 Sobic006G160100 Sobic006G160100 Sobic008G087900--Sobic006G160100 Sobic001G434200 Sobic001G434200 Sobic008G087900--Sobic001G434200 Sobic005G111900 Sobic005G111900 Sobic008G087900--Sobic005G111900 Sobic007G028500 Sobic007G028500 Sobic008G087900--Sobic007G028500 Sobic002G181600 Sobic002G181600 Sobic008G087900--Sobic002G181600 Sobic002G047500 Sobic002G047500 Sobic008G087900--Sobic002G047500 Sobic006G274800 Sobic006G274800 Sobic008G087900--Sobic006G274800 Sobic006G039400 Sobic006G039400 Sobic008G087900--Sobic006G039400 Sobic001G412100 Sobic001G412100 Sobic008G087900--Sobic001G412100 Sobic006G160100--Sobic008G087900 Sobic010G197900 Sobic010G197900 Sobic006G160100--Sobic010G197900 Sobic001G404200 Sobic001G404200 Sobic006G160100--Sobic001G404200 Sobic006G094600 Sobic006G094600 Sobic006G160100--Sobic006G094600 Sobic006G011000 Sobic006G011000 Sobic006G160100--Sobic006G011000 Sobic003G196800 Sobic003G196800 Sobic006G160100--Sobic003G196800 Sobic006G160100--Sobic005G111900 Sobic009G216700 Sobic009G216700 Sobic006G160100--Sobic009G216700 Sobic004G291400 Sobic004G291400 Sobic006G160100--Sobic004G291400 Sobic007G071900 Sobic007G071900 Sobic001G434200--Sobic007G071900 Sobic006G093300 Sobic006G093300 Sobic001G434200--Sobic006G093300 Sobic001G434200--Sobic006G039400 Sobic001G468600 Sobic001G468600 Sobic001G434200--Sobic001G468600 Sobic001G333100 Sobic001G333100 Sobic001G434200--Sobic001G333100 Sobic004G171200 Sobic004G171200 Sobic001G434200--Sobic004G171200 Sobic001G434200--Sobic008G087900 Sobic004G121300 Sobic004G121300 Sobic001G434200--Sobic004G121300 Sobic001G014800 Sobic001G014800 Sobic001G434200--Sobic001G014800 Sobic007G061400 Sobic007G061400 Sobic005G111900--Sobic007G061400 Sobic005G111900--Sobic001G014800 Sobic006G029000 Sobic006G029000 Sobic005G111900--Sobic006G029000 Sobic006G002201 Sobic006G002201 Sobic005G111900--Sobic006G002201 Sobic004G194900 Sobic004G194900 Sobic005G111900--Sobic004G194900 Sobic003G349300 Sobic003G349300 Sobic005G111900--Sobic003G349300 Sobic010G205300 Sobic010G205300 Sobic005G111900--Sobic010G205300 Sobic001G473800 Sobic001G473800 Sobic005G111900--Sobic001G473800 Sobic009G149500 Sobic009G149500 Sobic005G111900--Sobic009G149500 Sobic002G395500 Sobic002G395500 Sobic007G028500--Sobic002G395500 Sobic002G238400 Sobic002G238400 Sobic007G028500--Sobic002G238400 Sobic003G156400 Sobic003G156400 Sobic007G028500--Sobic003G156400 Sobic002G355800 Sobic002G355800 Sobic007G028500--Sobic002G355800 Sobic004G186900 Sobic004G186900 Sobic007G028500--Sobic004G186900 Sobic002G200000 Sobic002G200000 Sobic007G028500--Sobic002G200000 Sobic006G012700 Sobic006G012700 Sobic007G028500--Sobic006G012700 Sobic007G028500--Sobic008G087900 Sobic001G465400 Sobic001G465400 Sobic007G028500--Sobic001G465400 Sobic002G181600--Sobic006G274800 Sobic003G354600 Sobic003G354600 Sobic002G181600--Sobic003G354600 Sobic001G532600 Sobic001G532600 Sobic002G181600--Sobic001G532600 Sobic002G376600 Sobic002G376600 Sobic002G181600--Sobic002G376600 Sobic002G181600--Sobic008G087900 Sobic001G136800 Sobic001G136800 Sobic002G181600--Sobic001G136800 Sobic002G181600--Sobic006G039400 Sobic004G033700 Sobic004G033700 Sobic002G181600--Sobic004G033700 Sobic002G335000 Sobic002G335000 Sobic002G181600--Sobic002G335000 Sobic002G047500--Sobic007G028500 Sobic002G047500--Sobic008G087900 Sobic001G014200 Sobic001G014200 Sobic002G047500--Sobic001G014200 Sobic003G370500 Sobic003G370500 Sobic002G047500--Sobic003G370500 Sobic002G047500--Sobic006G039400 Sobic008G048300 Sobic008G048300 Sobic002G047500--Sobic008G048300 Sobic007G076400 Sobic007G076400 Sobic002G047500--Sobic007G076400 Sobic007G087000 Sobic007G087000 Sobic002G047500--Sobic007G087000 Sobic004G054100 Sobic004G054100 Sobic002G047500--Sobic004G054100 Sobic006G274800--Sobic002G181600 Sobic006G274800--Sobic001G136800 Sobic006G274800--Sobic003G354600 Sobic002G131500 Sobic002G131500 Sobic006G274800--Sobic002G131500 Sobic006G274800--Sobic002G335000 Sobic005G199400 Sobic005G199400 Sobic006G274800--Sobic005G199400 Sobic006G274800--Sobic004G121300 Sobic006G274800--Sobic004G033700 Sobic006G274800--Sobic008G087900 Sobic006G039400--Sobic006G093300 Sobic001G405600 Sobic001G405600 Sobic006G039400--Sobic001G405600 Sobic003G296900 Sobic003G296900 Sobic006G039400--Sobic003G296900 Sobic001G237600 Sobic001G237600 Sobic006G039400--Sobic001G237600 Sobic003G182300 Sobic003G182300 Sobic006G039400--Sobic003G182300 Sobic010G230600 Sobic010G230600 Sobic006G039400--Sobic010G230600 Sobic007G162100 Sobic007G162100 Sobic006G039400--Sobic007G162100 Sobic006G039400--Sobic007G087000 Sobic001G283600 Sobic001G283600 Sobic006G039400--Sobic001G283600 Sobic005G160400 Sobic005G160400 Sobic001G412100--Sobic005G160400 Sobic007G165900 Sobic007G165900 Sobic001G412100--Sobic007G165900 Sobic010G265300 Sobic010G265300 Sobic001G412100--Sobic010G265300 Sobic004G257100 Sobic004G257100 Sobic001G412100--Sobic004G257100 Sobic010G156000 Sobic010G156000 Sobic001G412100--Sobic010G156000 Sobic001G412100--Sobic008G087900 Sobic002G301000 Sobic002G301000 Sobic001G412100--Sobic002G301000 Sobic001G031100 Sobic001G031100 Sobic001G412100--Sobic001G031100 Sobic007G095500 Sobic007G095500 Sobic001G412100--Sobic007G095500
Octagon: transcription factors


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