Gene annotation
Transcriptome id Sobic.004G136500.1
Synonym
Functional annotation -
UniProt A0A194YPL4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G008800 expressed protein -
2 Sobic.004G074300 phytoene dehydrogenase-like, putative, expressed K16750: biogenesis of lysosome-related organelles complex 1 subunit 2
3 Sobic.004G117800 Ser/Thr protein phosphatase family protein, putative, expressed K18467: vacuolar protein sorting-associated protein 29
4 Sobic.001G119900 - K12858: DDX23, ATP-dependent RNA helicase DDX23/PRP28
5 Sobic.002G209400 transcription initiation factor TFIID subunit 10, putative, expressed K03134: transcription initiation factor TFIID subunit 10
6 Sobic.006G272200 cleavage and polyadenylation specificity factor subunit 5, putative, expressed K14397: NUDT21, CPSF5, cleavage and polyadenylation specificity factor subunit 5
7 Sobic.010G085200 mediator of RNA polymerase II transcription subunit 6, putative, expressed K15128: mediator of RNA polymerase II transcription subunit 6
8 Sobic.001G132900 expressed protein -
9 Sobic.001G280400 ankyrin repeat domain-containing protein 28, putative, expressed -
10 Sobic.004G077600 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
11 Sobic.006G087400 expressed protein -
12 Sobic.008G087900 expressed protein -
13 Sobic.009G209100 plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed K13199: plasminogen activator inhibitor 1 RNA-binding protein
14 Sobic.004G232800 expressed protein -
15 Sobic.010G031500 - -
16 Sobic.004G227300 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
17 Sobic.005G155800 actin polymerization factor, putative, expressed K05754: actin related protein 2/3 complex, subunit 5
18 Sobic.002G238000 RNA 3-terminal phosphate cyclase, putative, expressed K11108: RNA 3'-terminal phosphate cyclase-like protein
19 Sobic.002G259400 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
20 Sobic.002G083900 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4


Gene co-expression network
sample Sobic004G136500 Sobic004G136500 Sobic001G008800 Sobic001G008800 Sobic004G136500--Sobic001G008800 Sobic004G074300 Sobic004G074300 Sobic004G136500--Sobic004G074300 Sobic004G117800 Sobic004G117800 Sobic004G136500--Sobic004G117800 Sobic001G119900 Sobic001G119900 Sobic004G136500--Sobic001G119900 Sobic002G209400 Sobic002G209400 Sobic004G136500--Sobic002G209400 Sobic006G272200 Sobic006G272200 Sobic004G136500--Sobic006G272200 Sobic010G085200 Sobic010G085200 Sobic004G136500--Sobic010G085200 Sobic001G132900 Sobic001G132900 Sobic004G136500--Sobic001G132900 Sobic001G280400 Sobic001G280400 Sobic004G136500--Sobic001G280400 Sobic001G129400 Sobic001G129400 Sobic001G008800--Sobic001G129400 Sobic003G326900 Sobic003G326900 Sobic001G008800--Sobic003G326900 Sobic001G008800--Sobic001G132900 Sobic003G003000 Sobic003G003000 Sobic001G008800--Sobic003G003000 Sobic001G008800--Sobic004G136500 Sobic001G008800--Sobic004G117800 Sobic001G144600 Sobic001G144600 Sobic001G008800--Sobic001G144600 Sobic006G087400 Sobic006G087400 Sobic001G008800--Sobic006G087400 Sobic001G451901 Sobic001G451901 Sobic001G008800--Sobic001G451901 Sobic002G268400 Sobic002G268400 Sobic004G074300--Sobic002G268400 Sobic003G119400 Sobic003G119400 Sobic004G074300--Sobic003G119400 Sobic001G152000 Sobic001G152000 Sobic004G074300--Sobic001G152000 Sobic009G033900 Sobic009G033900 Sobic004G074300--Sobic009G033900 Sobic001G263000 Sobic001G263000 Sobic004G074300--Sobic001G263000 Sobic002G259400 Sobic002G259400 Sobic004G074300--Sobic002G259400 Sobic010G057900 Sobic010G057900 Sobic004G074300--Sobic010G057900 Sobic004G077600 Sobic004G077600 Sobic004G074300--Sobic004G077600 Sobic006G054500 Sobic006G054500 Sobic004G074300--Sobic006G054500 Sobic006G170200 Sobic006G170200 Sobic004G117800--Sobic006G170200 Sobic008G051100 Sobic008G051100 Sobic004G117800--Sobic008G051100 Sobic009G029700 Sobic009G029700 Sobic004G117800--Sobic009G029700 Sobic004G117800--Sobic001G280400 Sobic004G117800--Sobic004G136500 Sobic004G117800--Sobic001G008800 Sobic004G117800--Sobic001G132900 Sobic002G058700 Sobic002G058700 Sobic004G117800--Sobic002G058700 Sobic003G058900 Sobic003G058900 Sobic004G117800--Sobic003G058900 Sobic003G122500 Sobic003G122500 Sobic001G119900--Sobic003G122500 Sobic010G228700 Sobic010G228700 Sobic001G119900--Sobic010G228700 Sobic004G235300 Sobic004G235300 Sobic001G119900--Sobic004G235300 Sobic008G051200 Sobic008G051200 Sobic001G119900--Sobic008G051200 Sobic002G083900 Sobic002G083900 Sobic001G119900--Sobic002G083900 Sobic009G155250 Sobic009G155250 Sobic001G119900--Sobic009G155250 Sobic001G119900--Sobic010G085200 Sobic001G251100 Sobic001G251100 Sobic001G119900--Sobic001G251100 Sobic002G052700 Sobic002G052700 Sobic001G119900--Sobic002G052700 Sobic002G209400--Sobic001G263000 Sobic006G244700 Sobic006G244700 Sobic002G209400--Sobic006G244700 Sobic004G232800 Sobic004G232800 Sobic002G209400--Sobic004G232800 Sobic007G061400 Sobic007G061400 Sobic002G209400--Sobic007G061400 Sobic007G188300 Sobic007G188300 Sobic002G209400--Sobic007G188300 Sobic002G209400--Sobic010G057900 Sobic002G111200 Sobic002G111200 Sobic002G209400--Sobic002G111200 Sobic005G111900 Sobic005G111900 Sobic002G209400--Sobic005G111900 Sobic001G014800 Sobic001G014800 Sobic002G209400--Sobic001G014800 Sobic006G272200--Sobic010G085200 Sobic006G272200--Sobic003G119400 Sobic001G362300 Sobic001G362300 Sobic006G272200--Sobic001G362300 Sobic002G394800 Sobic002G394800 Sobic006G272200--Sobic002G394800 Sobic009G007700 Sobic009G007700 Sobic006G272200--Sobic009G007700 Sobic006G272200--Sobic004G074300 Sobic001G370300 Sobic001G370300 Sobic006G272200--Sobic001G370300 Sobic006G233000 Sobic006G233000 Sobic006G272200--Sobic006G233000 Sobic008G009600 Sobic008G009600 Sobic006G272200--Sobic008G009600 Sobic005G220000 Sobic005G220000 Sobic010G085200--Sobic005G220000 Sobic002G412700 Sobic002G412700 Sobic010G085200--Sobic002G412700 Sobic010G085200--Sobic006G233000 Sobic010G085200--Sobic009G007700 Sobic010G279700 Sobic010G279700 Sobic010G085200--Sobic010G279700 Sobic010G239800 Sobic010G239800 Sobic010G085200--Sobic010G239800 Sobic007G011600 Sobic007G011600 Sobic010G085200--Sobic007G011600 Sobic003G314700 Sobic003G314700 Sobic010G085200--Sobic003G314700 Sobic003G209400 Sobic003G209400 Sobic010G085200--Sobic003G209400 Sobic001G132900--Sobic003G003000 Sobic001G132900--Sobic001G008800 Sobic009G209100 Sobic009G209100 Sobic001G132900--Sobic009G209100 Sobic001G132900--Sobic001G129400 Sobic001G404100 Sobic001G404100 Sobic001G132900--Sobic001G404100 Sobic010G018000 Sobic010G018000 Sobic001G132900--Sobic010G018000 Sobic001G136500 Sobic001G136500 Sobic001G132900--Sobic001G136500 Sobic009G130400 Sobic009G130400 Sobic001G132900--Sobic009G130400 Sobic001G132900--Sobic004G117800 Sobic005G164500 Sobic005G164500 Sobic001G280400--Sobic005G164500 Sobic001G280400--Sobic004G117800 Sobic001G280400--Sobic008G051100 Sobic005G100900 Sobic005G100900 Sobic001G280400--Sobic005G100900 Sobic001G099800 Sobic001G099800 Sobic001G280400--Sobic001G099800 Sobic001G280400--Sobic003G209400 Sobic004G027000 Sobic004G027000 Sobic001G280400--Sobic004G027000 Sobic001G280400--Sobic004G136500 Sobic001G280400--Sobic001G132900
Octagon: transcription factors


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