Gene annotation
Transcriptome id Sobic.001G280400.1
Synonym Sb01g027590
Functional annotation ankyrin repeat domain-containing protein 28, putative, expressed
UniProt C5WQK7
Pfam PF12796 PF13637
Panther DB PTHR24198
NCBI CDD KOG4214; Myotrophin and similar proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G19150 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os10g43040.1 : ankyrin repeat domain-containing protein 28, putative, expressed
MaizeGDB (Corn) Zm00025a003597
Brachypodium -
Barley HORVU1Hr1G051420.4
Wheat TraesCS1B02G213200 , TraesCS1D02G202000
Populus -


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cDNA sequences
Sobic.001G280400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G164500 expressed protein -
2 Sobic.004G117800 Ser/Thr protein phosphatase family protein, putative, expressed K18467: vacuolar protein sorting-associated protein 29
3 Sobic.008G051100 RNA polymerase II subunit A C-terminal domain phosphatase ssu72, putative, expressed K15544: RNA polymerase II subunit A C-terminal domain phosphatase SSU72
4 Sobic.005G100900 DAG protein, chloroplast precursor, putative, expressed -
5 Sobic.001G099800 nucleic acid binding protein, putative, expressed -
6 Sobic.003G209400 expressed protein -
7 Sobic.004G027000 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
8 Sobic.004G136500 - -
9 Sobic.001G132900 expressed protein -
10 Sobic.009G209100 plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed K13199: plasminogen activator inhibitor 1 RNA-binding protein
11 Sobic.002G238000 RNA 3-terminal phosphate cyclase, putative, expressed K11108: RNA 3'-terminal phosphate cyclase-like protein
12 Sobic.007G096200 WD-40 repeat protein family, putative, expressed -
13 Sobic.004G212700 RNA recognition motif containing protein, putative, expressed K12883: NCBP2, nuclear cap-binding protein subunit 2
14 Sobic.007G114000 histone deacetylase, putative, expressed K06067: histone deacetylase 1/2
15 Sobic.004G206300 pre-mRNA-splicing factor ISY1, putative, expressed K12870: pre-mRNA-splicing factor ISY1
16 Sobic.009G071700 O-sialoglycoprotein endopeptidase, putative, expressed K01409: KAE1, tsaD, N6-L-threonylcarbamoyladenine synthase
17 Sobic.008G125000 AP-3 complex subunit delta, putative, expressed K12396: AP-3 complex subunit delta
18 Sobic.004G173100 exosome complex exonuclease, putative, expressed K03678: RRP45, exosome complex component RRP45
19 Sobic.002G152900 OsTOP6B - Topoisomerase 6 subunit B, expressed -
20 Sobic.010G085200 mediator of RNA polymerase II transcription subunit 6, putative, expressed K15128: mediator of RNA polymerase II transcription subunit 6


Gene co-expression network
sample Sobic001G280400 Sobic001G280400 Sobic005G164500 Sobic005G164500 Sobic001G280400--Sobic005G164500 Sobic004G117800 Sobic004G117800 Sobic001G280400--Sobic004G117800 Sobic008G051100 Sobic008G051100 Sobic001G280400--Sobic008G051100 Sobic005G100900 Sobic005G100900 Sobic001G280400--Sobic005G100900 Sobic001G099800 Sobic001G099800 Sobic001G280400--Sobic001G099800 Sobic003G209400 Sobic003G209400 Sobic001G280400--Sobic003G209400 Sobic004G027000 Sobic004G027000 Sobic001G280400--Sobic004G027000 Sobic004G136500 Sobic004G136500 Sobic001G280400--Sobic004G136500 Sobic001G132900 Sobic001G132900 Sobic001G280400--Sobic001G132900 Sobic005G164500--Sobic001G280400 Sobic005G164500--Sobic004G027000 Sobic005G164500--Sobic004G117800 Sobic007G013300 Sobic007G013300 Sobic005G164500--Sobic007G013300 Sobic010G085200 Sobic010G085200 Sobic005G164500--Sobic010G085200 Sobic002G394800 Sobic002G394800 Sobic005G164500--Sobic002G394800 Sobic001G469200 Sobic001G469200 Sobic005G164500--Sobic001G469200 Sobic002G058700 Sobic002G058700 Sobic005G164500--Sobic002G058700 Sobic001G426100 Sobic001G426100 Sobic005G164500--Sobic001G426100 Sobic006G170200 Sobic006G170200 Sobic004G117800--Sobic006G170200 Sobic004G117800--Sobic008G051100 Sobic009G029700 Sobic009G029700 Sobic004G117800--Sobic009G029700 Sobic004G117800--Sobic001G280400 Sobic004G117800--Sobic004G136500 Sobic001G008800 Sobic001G008800 Sobic004G117800--Sobic001G008800 Sobic004G117800--Sobic001G132900 Sobic004G117800--Sobic002G058700 Sobic003G058900 Sobic003G058900 Sobic004G117800--Sobic003G058900 Sobic008G051100--Sobic004G117800 Sobic008G103800 Sobic008G103800 Sobic008G051100--Sobic008G103800 Sobic008G051100--Sobic001G280400 Sobic004G184000 Sobic004G184000 Sobic008G051100--Sobic004G184000 Sobic004G206300 Sobic004G206300 Sobic008G051100--Sobic004G206300 Sobic003G167900 Sobic003G167900 Sobic008G051100--Sobic003G167900 Sobic006G020900 Sobic006G020900 Sobic008G051100--Sobic006G020900 Sobic008G051100--Sobic001G099800 Sobic001G408800 Sobic001G408800 Sobic008G051100--Sobic001G408800 Sobic002G238000 Sobic002G238000 Sobic005G100900--Sobic002G238000 Sobic009G071700 Sobic009G071700 Sobic005G100900--Sobic009G071700 Sobic007G114000 Sobic007G114000 Sobic005G100900--Sobic007G114000 Sobic003G425100 Sobic003G425100 Sobic005G100900--Sobic003G425100 Sobic001G119600 Sobic001G119600 Sobic005G100900--Sobic001G119600 Sobic002G262100 Sobic002G262100 Sobic005G100900--Sobic002G262100 Sobic004G173100 Sobic004G173100 Sobic005G100900--Sobic004G173100 Sobic001G485600 Sobic001G485600 Sobic005G100900--Sobic001G485600 Sobic008G165900 Sobic008G165900 Sobic005G100900--Sobic008G165900 Sobic001G099800--Sobic003G058900 Sobic001G136500 Sobic001G136500 Sobic001G099800--Sobic001G136500 Sobic001G099800--Sobic001G132900 Sobic001G099800--Sobic001G280400 Sobic001G099800--Sobic004G206300 Sobic008G008300 Sobic008G008300 Sobic001G099800--Sobic008G008300 Sobic008G125000 Sobic008G125000 Sobic001G099800--Sobic008G125000 Sobic001G099800--Sobic004G117800 Sobic001G099800--Sobic008G051100 Sobic009G007700 Sobic009G007700 Sobic003G209400--Sobic009G007700 Sobic002G412700 Sobic002G412700 Sobic003G209400--Sobic002G412700 Sobic006G112700 Sobic006G112700 Sobic003G209400--Sobic006G112700 Sobic003G209400--Sobic010G085200 Sobic008G080500 Sobic008G080500 Sobic003G209400--Sobic008G080500 Sobic007G097400 Sobic007G097400 Sobic003G209400--Sobic007G097400 Sobic004G034700 Sobic004G034700 Sobic003G209400--Sobic004G034700 Sobic008G017100 Sobic008G017100 Sobic003G209400--Sobic008G017100 Sobic002G356600 Sobic002G356600 Sobic003G209400--Sobic002G356600 Sobic004G225300 Sobic004G225300 Sobic004G027000--Sobic004G225300 Sobic004G027000--Sobic004G206300 Sobic002G139000 Sobic002G139000 Sobic004G027000--Sobic002G139000 Sobic009G056300 Sobic009G056300 Sobic004G027000--Sobic009G056300 Sobic004G027000--Sobic002G394800 Sobic001G422700 Sobic001G422700 Sobic004G027000--Sobic001G422700 Sobic004G027000--Sobic001G280400 Sobic004G027000--Sobic005G164500 Sobic004G027000--Sobic004G184000 Sobic004G136500--Sobic001G008800 Sobic004G074300 Sobic004G074300 Sobic004G136500--Sobic004G074300 Sobic004G136500--Sobic004G117800 Sobic001G119900 Sobic001G119900 Sobic004G136500--Sobic001G119900 Sobic002G209400 Sobic002G209400 Sobic004G136500--Sobic002G209400 Sobic006G272200 Sobic006G272200 Sobic004G136500--Sobic006G272200 Sobic004G136500--Sobic010G085200 Sobic004G136500--Sobic001G132900 Sobic004G136500--Sobic001G280400 Sobic003G003000 Sobic003G003000 Sobic001G132900--Sobic003G003000 Sobic001G132900--Sobic001G008800 Sobic009G209100 Sobic009G209100 Sobic001G132900--Sobic009G209100 Sobic001G129400 Sobic001G129400 Sobic001G132900--Sobic001G129400 Sobic001G404100 Sobic001G404100 Sobic001G132900--Sobic001G404100 Sobic010G018000 Sobic010G018000 Sobic001G132900--Sobic010G018000 Sobic001G132900--Sobic001G136500 Sobic009G130400 Sobic009G130400 Sobic001G132900--Sobic009G130400 Sobic001G132900--Sobic004G117800
Octagon: transcription factors


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