Gene annotation
Transcriptome id Sobic.001G132900.1
Synonym Sb01g011640
Functional annotation expressed protein
UniProt C5WPJ3
Pfam -
Panther DB PTHR37736 PTHR37736:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G27090 : glycine-rich protein
RAP-DB (Rice) LOC_Os03g48260.1 : expressed protein
MaizeGDB (Corn) Zm00025a007646 , Zm00025a017092
Brachypodium KQK13737
Barley HORVU4Hr1G004410.1 , HORVU4Hr1G004410.3 , HORVU4Hr1G004410.2
Wheat TraesCS4D02G027100 , TraesCS4D02G027100 , TraesCS4A02G283500 , TraesCS4A02G283500 , TraesCS4B02G029200 , TraesCS4B02G029200 , TraesCS7A02G186400 , TraesCS4A02G283500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G003000 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
2 Sobic.001G008800 expressed protein -
3 Sobic.009G209100 plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed K13199: plasminogen activator inhibitor 1 RNA-binding protein
4 Sobic.001G129400 ribosomal protein-related, putative, expressed K02970: RP-S21, MRPS21, small subunit ribosomal protein S21
5 Sobic.001G404100 expressed protein K03237: translation initiation factor 2 subunit 1
6 Sobic.010G018000 39S ribosomal protein L47, mitochondrial precursor, putative, expressed K17428: MRPL47, large subunit ribosomal protein L47
7 Sobic.001G136500 RNA recognition motif containing protein, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
8 Sobic.009G130400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
9 Sobic.004G117800 Ser/Thr protein phosphatase family protein, putative, expressed K18467: vacuolar protein sorting-associated protein 29
10 Sobic.001G099800 nucleic acid binding protein, putative, expressed -
11 Sobic.001G041200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09567: PPIH, peptidyl-prolyl isomerase H (cyclophilin H)
12 Sobic.003G326900 expressed protein -
13 Sobic.004G248900 50S ribosomal protein L17, putative, expressed K02879: RP-L17, MRPL17, large subunit ribosomal protein L17
14 Sobic.001G451901 - -
15 Sobic.008G103900 glycine-rich RNA-binding protein 7, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
16 Sobic.004G136500 - -
17 Sobic.001G280400 ankyrin repeat domain-containing protein 28, putative, expressed -
18 Sobic.008G008300 expressed protein -
19 Sobic.001G218800 expressed protein -
20 Sobic.006G109700 UBA and UBX domain-containing protein, putative, expressed K14012: SHP1, UBX1, UBX domain-containing protein 1


Gene co-expression network
sample Sobic001G132900 Sobic001G132900 Sobic003G003000 Sobic003G003000 Sobic001G132900--Sobic003G003000 Sobic001G008800 Sobic001G008800 Sobic001G132900--Sobic001G008800 Sobic009G209100 Sobic009G209100 Sobic001G132900--Sobic009G209100 Sobic001G129400 Sobic001G129400 Sobic001G132900--Sobic001G129400 Sobic001G404100 Sobic001G404100 Sobic001G132900--Sobic001G404100 Sobic010G018000 Sobic010G018000 Sobic001G132900--Sobic010G018000 Sobic001G136500 Sobic001G136500 Sobic001G132900--Sobic001G136500 Sobic009G130400 Sobic009G130400 Sobic001G132900--Sobic009G130400 Sobic004G117800 Sobic004G117800 Sobic001G132900--Sobic004G117800 Sobic003G003000--Sobic001G129400 Sobic003G003000--Sobic001G132900 Sobic006G281200 Sobic006G281200 Sobic003G003000--Sobic006G281200 Sobic003G003000--Sobic010G018000 Sobic003G003000--Sobic001G008800 Sobic004G018400 Sobic004G018400 Sobic003G003000--Sobic004G018400 Sobic002G117200 Sobic002G117200 Sobic003G003000--Sobic002G117200 Sobic010G094800 Sobic010G094800 Sobic003G003000--Sobic010G094800 Sobic005G127100 Sobic005G127100 Sobic003G003000--Sobic005G127100 Sobic001G008800--Sobic001G129400 Sobic003G326900 Sobic003G326900 Sobic001G008800--Sobic003G326900 Sobic001G008800--Sobic001G132900 Sobic001G008800--Sobic003G003000 Sobic004G136500 Sobic004G136500 Sobic001G008800--Sobic004G136500 Sobic001G008800--Sobic004G117800 Sobic001G144600 Sobic001G144600 Sobic001G008800--Sobic001G144600 Sobic006G087400 Sobic006G087400 Sobic001G008800--Sobic006G087400 Sobic001G451901 Sobic001G451901 Sobic001G008800--Sobic001G451901 Sobic009G209100--Sobic001G132900 Sobic001G280400 Sobic001G280400 Sobic009G209100--Sobic001G280400 Sobic009G209100--Sobic004G136500 Sobic009G209100--Sobic003G003000 Sobic008G103900 Sobic008G103900 Sobic009G209100--Sobic008G103900 Sobic009G209100--Sobic001G008800 Sobic004G173100 Sobic004G173100 Sobic009G209100--Sobic004G173100 Sobic009G209100--Sobic009G130400 Sobic003G117300 Sobic003G117300 Sobic009G209100--Sobic003G117300 Sobic001G129400--Sobic003G326900 Sobic001G129400--Sobic003G003000 Sobic010G194200 Sobic010G194200 Sobic001G129400--Sobic010G194200 Sobic001G129400--Sobic001G008800 Sobic004G248900 Sobic004G248900 Sobic001G129400--Sobic004G248900 Sobic001G129400--Sobic010G018000 Sobic001G129400--Sobic001G451901 Sobic001G060300 Sobic001G060300 Sobic001G129400--Sobic001G060300 Sobic001G473400 Sobic001G473400 Sobic001G129400--Sobic001G473400 Sobic002G341800 Sobic002G341800 Sobic001G404100--Sobic002G341800 Sobic001G481700 Sobic001G481700 Sobic001G404100--Sobic001G481700 Sobic001G502200 Sobic001G502200 Sobic001G404100--Sobic001G502200 Sobic008G137600 Sobic008G137600 Sobic001G404100--Sobic008G137600 Sobic009G104000 Sobic009G104000 Sobic001G404100--Sobic009G104000 Sobic001G096100 Sobic001G096100 Sobic001G404100--Sobic001G096100 Sobic002G428200 Sobic002G428200 Sobic001G404100--Sobic002G428200 Sobic009G212300 Sobic009G212300 Sobic001G404100--Sobic009G212300 Sobic006G252200 Sobic006G252200 Sobic001G404100--Sobic006G252200 Sobic010G018000--Sobic003G326900 Sobic010G018000--Sobic001G129400 Sobic010G018000--Sobic003G003000 Sobic007G034400 Sobic007G034400 Sobic010G018000--Sobic007G034400 Sobic007G143000 Sobic007G143000 Sobic010G018000--Sobic007G143000 Sobic002G045100 Sobic002G045100 Sobic010G018000--Sobic002G045100 Sobic003G367900 Sobic003G367900 Sobic010G018000--Sobic003G367900 Sobic007G108100 Sobic007G108100 Sobic010G018000--Sobic007G108100 Sobic001G431700 Sobic001G431700 Sobic010G018000--Sobic001G431700 Sobic001G136500--Sobic001G132900 Sobic001G099800 Sobic001G099800 Sobic001G136500--Sobic001G099800 Sobic009G056300 Sobic009G056300 Sobic001G136500--Sobic009G056300 Sobic008G008300 Sobic008G008300 Sobic001G136500--Sobic008G008300 Sobic010G079800 Sobic010G079800 Sobic001G136500--Sobic010G079800 Sobic006G276200 Sobic006G276200 Sobic001G136500--Sobic006G276200 Sobic004G146200 Sobic004G146200 Sobic001G136500--Sobic004G146200 Sobic008G125000 Sobic008G125000 Sobic001G136500--Sobic008G125000 Sobic004G206300 Sobic004G206300 Sobic001G136500--Sobic004G206300 Sobic009G130400--Sobic001G404100 Sobic009G130400--Sobic001G096100 Sobic009G130400--Sobic006G281200 Sobic008G058300 Sobic008G058300 Sobic009G130400--Sobic008G058300 Sobic010G013900 Sobic010G013900 Sobic009G130400--Sobic010G013900 Sobic003G028100 Sobic003G028100 Sobic009G130400--Sobic003G028100 Sobic009G130400--Sobic001G502200 Sobic009G130400--Sobic002G341800 Sobic009G130400--Sobic004G248900 Sobic006G170200 Sobic006G170200 Sobic004G117800--Sobic006G170200 Sobic008G051100 Sobic008G051100 Sobic004G117800--Sobic008G051100 Sobic009G029700 Sobic009G029700 Sobic004G117800--Sobic009G029700 Sobic004G117800--Sobic001G280400 Sobic004G117800--Sobic004G136500 Sobic004G117800--Sobic001G008800 Sobic004G117800--Sobic001G132900 Sobic002G058700 Sobic002G058700 Sobic004G117800--Sobic002G058700 Sobic003G058900 Sobic003G058900 Sobic004G117800--Sobic003G058900
Octagon: transcription factors


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