Gene annotation
Transcriptome id Sobic.001G041200.1
Synonym Sb01g003800
Functional annotation peptidyl-prolyl cis-trans isomerase, putative, expressed
UniProt C5WVZ8
Pfam PF00160
Panther DB PTHR11071 PTHR11071:SF58
NCBI CDD KOG0879; U-snRNP-associated cyclophilin type peptidyl-prolyl cis-trans isomerase
KEGG Orthology K09567; PPIH, peptidyl-prolyl isomerase H (cyclophilin H)
Gene Ontology GO:0006457; protein folding GO:0003755peptidyl-prolyl cis-trans isomerase activity GO:0000413protein peptidyl-prolyl isomerization


Orthologs (automatic annotation)
TAIR AT2G38730 : Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
RAP-DB (Rice) LOC_Os03g59700.1 : peptidyl-prolyl cis-trans isomerase, putative, expressed
MaizeGDB (Corn) Zm00025a016473
Brachypodium KQK12524
Barley HORVU5Hr1G111410.1
Wheat TraesCS5A02G467000 , TraesCS5D02G479900 , TraesCS5B02G478800
Populus -


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cDNA sequences
Sobic.001G041200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G242300 - -
2 Sobic.003G119400 PUR ALPHA-1, putative, expressed -
3 Sobic.006G257001 - -
4 Sobic.006G034800 neighbor of COX4, putative, expressed -
5 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
6 Sobic.002G259400 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
7 Sobic.001G105100 neighbor of COX4, putative, expressed -
8 Sobic.006G056600 ribosomal protein L4, putative, expressed K02926: RP-L4, MRPL4, large subunit ribosomal protein L4
9 Sobic.009G033900 snurportin-1, putative, expressed K13151: SNUPN, snurportin-1
10 Sobic.003G045400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
11 Sobic.002G341800 eukaryotic translation initiation factor 2 subunit gamma, putative, expressed K03242: translation initiation factor 2 subunit 3
12 Sobic.009G056300 PHD finger protein, putative, expressed -
13 Sobic.004G249300 proteasome subunit, putative, expressed K15030: translation initiation factor 3 subunit M
14 Sobic.009G193850 - -
15 Sobic.001G237500 transporter family protein, putative, expressed -
16 Sobic.002G268400 expressed protein -
17 Sobic.008G132800 expressed protein -
18 Sobic.002G402500 ribosomal protein, putative, expressed K02996: RP-S9, MRPS9, small subunit ribosomal protein S9
19 Sobic.004G072800 expressed protein -
20 Sobic.001G080000 expressed protein -


Gene co-expression network
sample Sobic001G041200 Sobic001G041200 Sobic006G242300 Sobic006G242300 Sobic001G041200--Sobic006G242300 Sobic003G119400 Sobic003G119400 Sobic001G041200--Sobic003G119400 Sobic006G257001 Sobic006G257001 Sobic001G041200--Sobic006G257001 Sobic006G034800 Sobic006G034800 Sobic001G041200--Sobic006G034800 Sobic001G067900 Sobic001G067900 Sobic001G041200--Sobic001G067900 Sobic002G259400 Sobic002G259400 Sobic001G041200--Sobic002G259400 Sobic001G105100 Sobic001G105100 Sobic001G041200--Sobic001G105100 Sobic006G056600 Sobic006G056600 Sobic001G041200--Sobic006G056600 Sobic009G033900 Sobic009G033900 Sobic001G041200--Sobic009G033900 Sobic006G242300--Sobic001G041200 Sobic003G045400 Sobic003G045400 Sobic006G242300--Sobic003G045400 Sobic006G242300--Sobic006G056600 Sobic009G133400 Sobic009G133400 Sobic006G242300--Sobic009G133400 Sobic006G242300--Sobic003G119400 Sobic006G242300--Sobic001G067900 Sobic006G242300--Sobic009G033900 Sobic004G072800 Sobic004G072800 Sobic006G242300--Sobic004G072800 Sobic003G043100 Sobic003G043100 Sobic006G242300--Sobic003G043100 Sobic004G074300 Sobic004G074300 Sobic003G119400--Sobic004G074300 Sobic003G119400--Sobic001G041200 Sobic003G119400--Sobic002G259400 Sobic010G146600 Sobic010G146600 Sobic003G119400--Sobic010G146600 Sobic006G216000 Sobic006G216000 Sobic003G119400--Sobic006G216000 Sobic006G272200 Sobic006G272200 Sobic003G119400--Sobic006G272200 Sobic003G119400--Sobic006G242300 Sobic002G268400 Sobic002G268400 Sobic003G119400--Sobic002G268400 Sobic002G306400 Sobic002G306400 Sobic003G119400--Sobic002G306400 Sobic006G257001--Sobic001G067900 Sobic006G257001--Sobic006G034800 Sobic006G257001--Sobic001G105100 Sobic001G237500 Sobic001G237500 Sobic006G257001--Sobic001G237500 Sobic006G257001--Sobic001G041200 Sobic002G131900 Sobic002G131900 Sobic006G257001--Sobic002G131900 Sobic010G105600 Sobic010G105600 Sobic006G257001--Sobic010G105600 Sobic003G217100 Sobic003G217100 Sobic006G257001--Sobic003G217100 Sobic002G301300 Sobic002G301300 Sobic006G257001--Sobic002G301300 Sobic006G034800--Sobic006G257001 Sobic006G034800--Sobic001G105100 Sobic006G034800--Sobic001G067900 Sobic003G400100 Sobic003G400100 Sobic006G034800--Sobic003G400100 Sobic006G034800--Sobic001G041200 Sobic010G205300 Sobic010G205300 Sobic006G034800--Sobic010G205300 Sobic006G034800--Sobic010G105600 Sobic001G206900 Sobic001G206900 Sobic006G034800--Sobic001G206900 Sobic006G034800--Sobic002G131900 Sobic001G067900--Sobic001G105100 Sobic001G067900--Sobic004G072800 Sobic001G067900--Sobic006G257001 Sobic002G281300 Sobic002G281300 Sobic001G067900--Sobic002G281300 Sobic001G067900--Sobic003G217100 Sobic001G067900--Sobic006G034800 Sobic006G250900 Sobic006G250900 Sobic001G067900--Sobic006G250900 Sobic001G067900--Sobic010G205300 Sobic001G067900--Sobic001G237500 Sobic002G259400--Sobic003G119400 Sobic002G259400--Sobic004G074300 Sobic002G259400--Sobic001G041200 Sobic002G259400--Sobic002G268400 Sobic002G259400--Sobic009G033900 Sobic010G269100 Sobic010G269100 Sobic002G259400--Sobic010G269100 Sobic006G281500 Sobic006G281500 Sobic002G259400--Sobic006G281500 Sobic001G263000 Sobic001G263000 Sobic002G259400--Sobic001G263000 Sobic010G085200 Sobic010G085200 Sobic002G259400--Sobic010G085200 Sobic001G105100--Sobic001G067900 Sobic001G105100--Sobic003G217100 Sobic008G132800 Sobic008G132800 Sobic001G105100--Sobic008G132800 Sobic001G105100--Sobic006G257001 Sobic001G105100--Sobic006G034800 Sobic001G105100--Sobic010G105600 Sobic001G105100--Sobic001G237500 Sobic006G222400 Sobic006G222400 Sobic001G105100--Sobic006G222400 Sobic008G137600 Sobic008G137600 Sobic001G105100--Sobic008G137600 Sobic001G201500 Sobic001G201500 Sobic006G056600--Sobic001G201500 Sobic006G056600--Sobic006G242300 Sobic006G056600--Sobic001G067900 Sobic006G056600--Sobic004G072800 Sobic006G056600--Sobic001G041200 Sobic001G091900 Sobic001G091900 Sobic006G056600--Sobic001G091900 Sobic002G341800 Sobic002G341800 Sobic006G056600--Sobic002G341800 Sobic002G014400 Sobic002G014400 Sobic006G056600--Sobic002G014400 Sobic010G247400 Sobic010G247400 Sobic006G056600--Sobic010G247400 Sobic006G183000 Sobic006G183000 Sobic009G033900--Sobic006G183000 Sobic009G033900--Sobic002G268400 Sobic001G249700 Sobic001G249700 Sobic009G033900--Sobic001G249700 Sobic009G033900--Sobic004G074300 Sobic009G033900--Sobic001G263000 Sobic001G152000 Sobic001G152000 Sobic009G033900--Sobic001G152000 Sobic004G057800 Sobic004G057800 Sobic009G033900--Sobic004G057800 Sobic009G033900--Sobic010G269100 Sobic006G252100 Sobic006G252100 Sobic009G033900--Sobic006G252100
Octagon: transcription factors


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