Gene annotation
Transcriptome id Sobic.001G105100.1,Sobic.001G105100.2
Synonym Sb01g009390, emb2731
Functional annotation neighbor of COX4, putative, expressed
UniProt A0A1B6QID0 , A0A1B6QIA8
Pfam PF03665
Panther DB PTHR12941
NCBI CDD KOG3289; Uncharacterized conserved protein encoded by sequence overlapping the COX4 gene
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G55940 : Uncharacterised protein family (UPF0172)
RAP-DB (Rice) LOC_Os04g20230.1 : neighbor of COX4, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ82064
Barley -
Wheat TraesCS2B02G091800 , TraesCS2A02G076900 , TraesCS2D02G075500
Populus -


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cDNA sequences
Sobic.001G105100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
2 Sobic.003G217100 Yip1 domain containing protein, expressed -
3 Sobic.008G132800 expressed protein -
4 Sobic.006G257001 - -
5 Sobic.006G034800 neighbor of COX4, putative, expressed -
6 Sobic.010G105600 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
7 Sobic.001G237500 transporter family protein, putative, expressed -
8 Sobic.006G222400 RNA recognition motif containing protein, putative, expressed -
9 Sobic.008G137600 RNA recognition motif containing protein, expressed K12900: FUS-interacting serine-arginine-rich protein 1
10 Sobic.010G065400 X0001, putative, expressed -
11 Sobic.003G030800 prenylated rab acceptor, putative, expressed -
12 Sobic.001G041200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09567: PPIH, peptidyl-prolyl isomerase H (cyclophilin H)
13 Sobic.001G307900 LYR motif containing protein, putative, expressed K18167: succinate dehydrogenase assembly factor 1
14 Sobic.004G262300 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
15 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
16 Sobic.001G126200 acetyltransferase, GNAT family, putative, expressed K17972: NAA20, N-terminal acetyltransferase B complex catalytic subunit
17 Sobic.004G072800 expressed protein -
18 Sobic.003G400100 leaf senescence related protein, putative, expressed -
19 Sobic.002G129000 RING zinc finger protein, putative, expressed -
20 Sobic.003G052400 proline-rich family protein, putative, expressed -


Gene co-expression network
sample Sobic001G105100 Sobic001G105100 Sobic001G067900 Sobic001G067900 Sobic001G105100--Sobic001G067900 Sobic003G217100 Sobic003G217100 Sobic001G105100--Sobic003G217100 Sobic008G132800 Sobic008G132800 Sobic001G105100--Sobic008G132800 Sobic006G257001 Sobic006G257001 Sobic001G105100--Sobic006G257001 Sobic006G034800 Sobic006G034800 Sobic001G105100--Sobic006G034800 Sobic010G105600 Sobic010G105600 Sobic001G105100--Sobic010G105600 Sobic001G237500 Sobic001G237500 Sobic001G105100--Sobic001G237500 Sobic006G222400 Sobic006G222400 Sobic001G105100--Sobic006G222400 Sobic008G137600 Sobic008G137600 Sobic001G105100--Sobic008G137600 Sobic001G067900--Sobic001G105100 Sobic004G072800 Sobic004G072800 Sobic001G067900--Sobic004G072800 Sobic001G067900--Sobic006G257001 Sobic002G281300 Sobic002G281300 Sobic001G067900--Sobic002G281300 Sobic001G067900--Sobic003G217100 Sobic001G067900--Sobic006G034800 Sobic006G250900 Sobic006G250900 Sobic001G067900--Sobic006G250900 Sobic010G205300 Sobic010G205300 Sobic001G067900--Sobic010G205300 Sobic001G067900--Sobic001G237500 Sobic003G217100--Sobic001G105100 Sobic002G090700 Sobic002G090700 Sobic003G217100--Sobic002G090700 Sobic003G217100--Sobic008G132800 Sobic003G217100--Sobic006G222400 Sobic001G309500 Sobic001G309500 Sobic003G217100--Sobic001G309500 Sobic003G217100--Sobic001G067900 Sobic005G184200 Sobic005G184200 Sobic003G217100--Sobic005G184200 Sobic003G217100--Sobic001G237500 Sobic001G408100 Sobic001G408100 Sobic003G217100--Sobic001G408100 Sobic010G029400 Sobic010G029400 Sobic008G132800--Sobic010G029400 Sobic002G078400 Sobic002G078400 Sobic008G132800--Sobic002G078400 Sobic009G016201 Sobic009G016201 Sobic008G132800--Sobic009G016201 Sobic001G331900 Sobic001G331900 Sobic008G132800--Sobic001G331900 Sobic004G066800 Sobic004G066800 Sobic008G132800--Sobic004G066800 Sobic008G132800--Sobic001G105100 Sobic005G157200 Sobic005G157200 Sobic008G132800--Sobic005G157200 Sobic010G065400 Sobic010G065400 Sobic008G132800--Sobic010G065400 Sobic008G132800--Sobic003G217100 Sobic006G257001--Sobic001G067900 Sobic006G257001--Sobic006G034800 Sobic006G257001--Sobic001G105100 Sobic006G257001--Sobic001G237500 Sobic001G041200 Sobic001G041200 Sobic006G257001--Sobic001G041200 Sobic002G131900 Sobic002G131900 Sobic006G257001--Sobic002G131900 Sobic006G257001--Sobic010G105600 Sobic006G257001--Sobic003G217100 Sobic002G301300 Sobic002G301300 Sobic006G257001--Sobic002G301300 Sobic006G034800--Sobic006G257001 Sobic006G034800--Sobic001G105100 Sobic006G034800--Sobic001G067900 Sobic003G400100 Sobic003G400100 Sobic006G034800--Sobic003G400100 Sobic006G034800--Sobic001G041200 Sobic006G034800--Sobic010G205300 Sobic006G034800--Sobic010G105600 Sobic001G206900 Sobic001G206900 Sobic006G034800--Sobic001G206900 Sobic006G034800--Sobic002G131900 Sobic010G105600--Sobic001G237500 Sobic010G105600--Sobic001G105100 Sobic003G405700 Sobic003G405700 Sobic010G105600--Sobic003G405700 Sobic010G105600--Sobic001G067900 Sobic010G105600--Sobic003G400100 Sobic010G105600--Sobic006G257001 Sobic002G272600 Sobic002G272600 Sobic010G105600--Sobic002G272600 Sobic001G061700 Sobic001G061700 Sobic010G105600--Sobic001G061700 Sobic010G105600--Sobic006G034800 Sobic001G237500--Sobic010G105600 Sobic001G237500--Sobic006G257001 Sobic001G237500--Sobic001G105100 Sobic001G237500--Sobic001G067900 Sobic001G237500--Sobic003G217100 Sobic004G222600 Sobic004G222600 Sobic001G237500--Sobic004G222600 Sobic001G237500--Sobic002G131900 Sobic003G052400 Sobic003G052400 Sobic001G237500--Sobic003G052400 Sobic004G132300 Sobic004G132300 Sobic001G237500--Sobic004G132300 Sobic010G238700 Sobic010G238700 Sobic006G222400--Sobic010G238700 Sobic001G126200 Sobic001G126200 Sobic006G222400--Sobic001G126200 Sobic006G222400--Sobic003G217100 Sobic006G222400--Sobic008G132800 Sobic006G222400--Sobic008G137600 Sobic002G428200 Sobic002G428200 Sobic006G222400--Sobic002G428200 Sobic006G222400--Sobic001G105100 Sobic004G224800 Sobic004G224800 Sobic006G222400--Sobic004G224800 Sobic010G017000 Sobic010G017000 Sobic006G222400--Sobic010G017000 Sobic001G532100 Sobic001G532100 Sobic008G137600--Sobic001G532100 Sobic001G402300 Sobic001G402300 Sobic008G137600--Sobic001G402300 Sobic001G294900 Sobic001G294900 Sobic008G137600--Sobic001G294900 Sobic008G137600--Sobic002G428200 Sobic003G273400 Sobic003G273400 Sobic008G137600--Sobic003G273400 Sobic006G109700 Sobic006G109700 Sobic008G137600--Sobic006G109700 Sobic002G341800 Sobic002G341800 Sobic008G137600--Sobic002G341800 Sobic001G404100 Sobic001G404100 Sobic008G137600--Sobic001G404100 Sobic001G502200 Sobic001G502200 Sobic008G137600--Sobic001G502200
Octagon: transcription factors


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