Gene annotation
Transcriptome id Sobic.004G262300.1
Synonym NTRA, Sb04g030050, ATNTRA, NTR2
Functional annotation thioredoxin reductase 2, putative, expressed
UniProt C5XZX5
Pfam PF00070
Panther DB PTHR22912 PTHR22912:SF183
NCBI CDD -
KEGG Orthology K00384; trxB, thioredoxin reductase (NADPH)
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT2G17420 : NADPH-dependent thioredoxin reductase A
RAP-DB (Rice) LOC_Os02g48290.1 : thioredoxin reductase 2, putative, expressed
MaizeGDB (Corn) Zm00025a042802 , Zm00025a034105 , Zm00025a021794
Brachypodium KQK01001 , KQK18457
Barley HORVU7Hr1G046890.1 , HORVU7Hr1G046890.2 , HORVU7Hr1G046890.3 , HORVU7Hr1G046890.4 , HORVU6Hr1G070120.1 , HORVU6Hr1G070120.2 , HORVU6Hr1G070120.3
Wheat TraesCS7D02G229100 , TraesCS6B02G306300 , TraesCS6A02G278000 , TraesCS6A02G278000 , TraesCS7A02G225400 , TraesCS7A02G225400 , TraesCS6D02G258600 , TraesCS7B02G194200
Populus -


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cDNA sequences
Sobic.004G262300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G202100 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
2 Sobic.001G060300 expressed protein -
3 Sobic.001G342200 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
4 Sobic.001G031900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
5 Sobic.010G038700 expressed protein -
6 Sobic.009G001900 expressed protein -
7 Sobic.004G066800 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
8 Sobic.002G131600 expressed protein -
9 Sobic.007G092100 ADP-ribosylation factor, putative, expressed K07942: ADP-ribosylation factor-like protein 1
10 Sobic.008G136800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17777: mitochondrial import inner membrane translocase subunit TIM9
11 Sobic.003G217100 Yip1 domain containing protein, expressed -
12 Sobic.010G008800 defender against cell death 1, putative, expressed K12668: OST2, oligosaccharyltransferase complex subunit epsilon
13 Sobic.001G095632 - -
14 Sobic.001G025600 huntingtin-interacting protein HYPK, putative, expressed -
15 Sobic.007G177200 peptidase, T1 family, putative, expressed K02731: 20S proteasome subunit alpha 4
16 Sobic.006G058900 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
17 Sobic.006G231500 acetyltransferase, GNAT family, putative, expressed K00670: NAA30, N-alpha-acetyltransferase 30
18 Sobic.001G057300 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
19 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
20 Sobic.004G310300 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3


Gene co-expression network
sample Sobic004G262300 Sobic004G262300 Sobic004G202100 Sobic004G202100 Sobic004G262300--Sobic004G202100 Sobic001G060300 Sobic001G060300 Sobic004G262300--Sobic001G060300 Sobic001G342200 Sobic001G342200 Sobic004G262300--Sobic001G342200 Sobic001G031900 Sobic001G031900 Sobic004G262300--Sobic001G031900 Sobic010G038700 Sobic010G038700 Sobic004G262300--Sobic010G038700 Sobic009G001900 Sobic009G001900 Sobic004G262300--Sobic009G001900 Sobic004G066800 Sobic004G066800 Sobic004G262300--Sobic004G066800 Sobic002G131600 Sobic002G131600 Sobic004G262300--Sobic002G131600 Sobic007G092100 Sobic007G092100 Sobic004G262300--Sobic007G092100 Sobic004G202100--Sobic001G031900 Sobic002G395000 Sobic002G395000 Sobic004G202100--Sobic002G395000 Sobic004G202100--Sobic004G262300 Sobic006G058900 Sobic006G058900 Sobic004G202100--Sobic006G058900 Sobic001G282500 Sobic001G282500 Sobic004G202100--Sobic001G282500 Sobic006G231500 Sobic006G231500 Sobic004G202100--Sobic006G231500 Sobic002G309500 Sobic002G309500 Sobic004G202100--Sobic002G309500 Sobic004G297700 Sobic004G297700 Sobic004G202100--Sobic004G297700 Sobic007G023400 Sobic007G023400 Sobic004G202100--Sobic007G023400 Sobic001G060300--Sobic001G342200 Sobic001G178500 Sobic001G178500 Sobic001G060300--Sobic001G178500 Sobic001G214900 Sobic001G214900 Sobic001G060300--Sobic001G214900 Sobic001G060300--Sobic004G262300 Sobic009G112900 Sobic009G112900 Sobic001G060300--Sobic009G112900 Sobic002G402500 Sobic002G402500 Sobic001G060300--Sobic002G402500 Sobic008G136800 Sobic008G136800 Sobic001G060300--Sobic008G136800 Sobic010G194200 Sobic010G194200 Sobic001G060300--Sobic010G194200 Sobic009G012800 Sobic009G012800 Sobic001G060300--Sobic009G012800 Sobic001G057300 Sobic001G057300 Sobic001G342200--Sobic001G057300 Sobic001G342200--Sobic001G060300 Sobic007G177200 Sobic007G177200 Sobic001G342200--Sobic007G177200 Sobic007G115100 Sobic007G115100 Sobic001G342200--Sobic007G115100 Sobic001G342200--Sobic007G092100 Sobic010G008800 Sobic010G008800 Sobic001G342200--Sobic010G008800 Sobic004G170400 Sobic004G170400 Sobic001G342200--Sobic004G170400 Sobic001G074700 Sobic001G074700 Sobic001G342200--Sobic001G074700 Sobic001G342200--Sobic001G031900 Sobic001G031900--Sobic006G058900 Sobic001G031900--Sobic004G202100 Sobic001G031900--Sobic002G395000 Sobic001G350600 Sobic001G350600 Sobic001G031900--Sobic001G350600 Sobic004G344800 Sobic004G344800 Sobic001G031900--Sobic004G344800 Sobic003G152900 Sobic003G152900 Sobic001G031900--Sobic003G152900 Sobic001G031900--Sobic004G170400 Sobic001G458800 Sobic001G458800 Sobic001G031900--Sobic001G458800 Sobic004G030000 Sobic004G030000 Sobic001G031900--Sobic004G030000 Sobic001G096100 Sobic001G096100 Sobic010G038700--Sobic001G096100 Sobic009G045800 Sobic009G045800 Sobic010G038700--Sobic009G045800 Sobic001G018200 Sobic001G018200 Sobic010G038700--Sobic001G018200 Sobic003G330500 Sobic003G330500 Sobic010G038700--Sobic003G330500 Sobic010G038700--Sobic004G262300 Sobic001G481700 Sobic001G481700 Sobic010G038700--Sobic001G481700 Sobic008G127500 Sobic008G127500 Sobic010G038700--Sobic008G127500 Sobic009G168000 Sobic009G168000 Sobic010G038700--Sobic009G168000 Sobic001G025600 Sobic001G025600 Sobic010G038700--Sobic001G025600 Sobic002G296200 Sobic002G296200 Sobic009G001900--Sobic002G296200 Sobic009G001900--Sobic008G136800 Sobic009G001900--Sobic004G066800 Sobic006G203900 Sobic006G203900 Sobic009G001900--Sobic006G203900 Sobic003G322300 Sobic003G322300 Sobic009G001900--Sobic003G322300 Sobic004G164000 Sobic004G164000 Sobic009G001900--Sobic004G164000 Sobic009G001900--Sobic006G231500 Sobic004G260200 Sobic004G260200 Sobic009G001900--Sobic004G260200 Sobic002G309700 Sobic002G309700 Sobic009G001900--Sobic002G309700 Sobic003G129800 Sobic003G129800 Sobic004G066800--Sobic003G129800 Sobic004G310300 Sobic004G310300 Sobic004G066800--Sobic004G310300 Sobic001G483100 Sobic001G483100 Sobic004G066800--Sobic001G483100 Sobic004G066800--Sobic007G092100 Sobic010G154700 Sobic010G154700 Sobic004G066800--Sobic010G154700 Sobic005G111100 Sobic005G111100 Sobic004G066800--Sobic005G111100 Sobic001G513500 Sobic001G513500 Sobic004G066800--Sobic001G513500 Sobic003G155400 Sobic003G155400 Sobic004G066800--Sobic003G155400 Sobic009G191200 Sobic009G191200 Sobic004G066800--Sobic009G191200 Sobic003G261100 Sobic003G261100 Sobic002G131600--Sobic003G261100 Sobic002G131600--Sobic002G296200 Sobic008G021100 Sobic008G021100 Sobic002G131600--Sobic008G021100 Sobic009G115700 Sobic009G115700 Sobic002G131600--Sobic009G115700 Sobic002G078300 Sobic002G078300 Sobic002G131600--Sobic002G078300 Sobic001G286200 Sobic001G286200 Sobic002G131600--Sobic001G286200 Sobic004G294900 Sobic004G294900 Sobic002G131600--Sobic004G294900 Sobic002G131600--Sobic004G262300 Sobic007G134900 Sobic007G134900 Sobic002G131600--Sobic007G134900 Sobic007G092100--Sobic004G066800 Sobic007G092100--Sobic001G057300 Sobic001G505500 Sobic001G505500 Sobic007G092100--Sobic001G505500 Sobic001G035400 Sobic001G035400 Sobic007G092100--Sobic001G035400 Sobic007G092100--Sobic001G342200 Sobic007G092100--Sobic003G330500 Sobic007G092100--Sobic001G096100 Sobic004G138800 Sobic004G138800 Sobic007G092100--Sobic004G138800 Sobic007G092100--Sobic009G191200
Octagon: transcription factors


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