Gene annotation
Transcriptome id Sobic.010G038700.1
Synonym Sb10g003440
Functional annotation expressed protein
UniProt C5Z493
Pfam -
Panther DB PTHR36755
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g05650.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK19857
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G096100 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
2 Sobic.009G045800 bifunctional protein folD, putative, expressed -
3 Sobic.001G018200 prohibitin-2, putative, expressed K17081: prohibitin 2
4 Sobic.003G330500 peptidase, T1 family, putative, expressed -
5 Sobic.004G262300 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
6 Sobic.001G481700 eukaryotic translation initiation factor 3 subunit K, putative, expressed K15028: translation initiation factor 3 subunit K
7 Sobic.008G127500 expressed protein -
8 Sobic.009G168000 selT-like protein precursor, putative, expressed -
9 Sobic.001G025600 huntingtin-interacting protein HYPK, putative, expressed -
10 Sobic.004G138800 prefoldin subunit, putative, expressed K09548: prefoldin subunit 1
11 Sobic.005G157200 prefoldin subunit, putative, expressed K09549: prefoldin subunit 2
12 Sobic.001G331900 expressed protein -
13 Sobic.001G404100 expressed protein K03237: translation initiation factor 2 subunit 1
14 Sobic.010G065400 X0001, putative, expressed -
15 Sobic.004G224900 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
16 Sobic.004G066800 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
17 Sobic.001G513500 ribosomal protein L7Ae, putative, expressed K12845: SNU13, U4/U6 small nuclear ribonucleoprotein SNU13
18 Sobic.010G029400 peptidase, T1 family, putative, expressed K02738: 20S proteasome subunit beta 1
19 Sobic.003G160900 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
20 Sobic.009G008600 REX1 DNA Repair family protein, expressed K10845: TTDA, GTF2H5, TFIIH basal transcription factor complex TTD-A subunit


Gene co-expression network
sample Sobic010G038700 Sobic010G038700 Sobic001G096100 Sobic001G096100 Sobic010G038700--Sobic001G096100 Sobic009G045800 Sobic009G045800 Sobic010G038700--Sobic009G045800 Sobic001G018200 Sobic001G018200 Sobic010G038700--Sobic001G018200 Sobic003G330500 Sobic003G330500 Sobic010G038700--Sobic003G330500 Sobic004G262300 Sobic004G262300 Sobic010G038700--Sobic004G262300 Sobic001G481700 Sobic001G481700 Sobic010G038700--Sobic001G481700 Sobic008G127500 Sobic008G127500 Sobic010G038700--Sobic008G127500 Sobic009G168000 Sobic009G168000 Sobic010G038700--Sobic009G168000 Sobic001G025600 Sobic001G025600 Sobic010G038700--Sobic001G025600 Sobic004G066800 Sobic004G066800 Sobic001G096100--Sobic004G066800 Sobic004G138800 Sobic004G138800 Sobic001G096100--Sobic004G138800 Sobic001G096100--Sobic003G330500 Sobic006G252200 Sobic006G252200 Sobic001G096100--Sobic006G252200 Sobic004G224900 Sobic004G224900 Sobic001G096100--Sobic004G224900 Sobic002G255100 Sobic002G255100 Sobic001G096100--Sobic002G255100 Sobic001G096100--Sobic001G481700 Sobic003G196800 Sobic003G196800 Sobic001G096100--Sobic003G196800 Sobic001G096100--Sobic010G038700 Sobic009G045800--Sobic010G038700 Sobic009G045800--Sobic004G066800 Sobic010G029400 Sobic010G029400 Sobic009G045800--Sobic010G029400 Sobic009G045800--Sobic003G330500 Sobic003G405900 Sobic003G405900 Sobic009G045800--Sobic003G405900 Sobic010G042800 Sobic010G042800 Sobic009G045800--Sobic010G042800 Sobic002G406500 Sobic002G406500 Sobic009G045800--Sobic002G406500 Sobic007G091000 Sobic007G091000 Sobic009G045800--Sobic007G091000 Sobic009G045800--Sobic004G224900 Sobic001G018200--Sobic002G406500 Sobic006G216600 Sobic006G216600 Sobic001G018200--Sobic006G216600 Sobic001G058900 Sobic001G058900 Sobic001G018200--Sobic001G058900 Sobic001G057300 Sobic001G057300 Sobic001G018200--Sobic001G057300 Sobic002G304900 Sobic002G304900 Sobic001G018200--Sobic002G304900 Sobic001G018200--Sobic010G038700 Sobic001G513500 Sobic001G513500 Sobic001G018200--Sobic001G513500 Sobic009G191200 Sobic009G191200 Sobic001G018200--Sobic009G191200 Sobic001G377800 Sobic001G377800 Sobic001G018200--Sobic001G377800 Sobic003G330500--Sobic004G224900 Sobic007G176200 Sobic007G176200 Sobic003G330500--Sobic007G176200 Sobic007G076300 Sobic007G076300 Sobic003G330500--Sobic007G076300 Sobic003G330500--Sobic006G252200 Sobic001G458700 Sobic001G458700 Sobic003G330500--Sobic001G458700 Sobic001G010700 Sobic001G010700 Sobic003G330500--Sobic001G010700 Sobic001G502200 Sobic001G502200 Sobic003G330500--Sobic001G502200 Sobic003G330500--Sobic004G138800 Sobic003G330500--Sobic001G096100 Sobic004G202100 Sobic004G202100 Sobic004G262300--Sobic004G202100 Sobic001G060300 Sobic001G060300 Sobic004G262300--Sobic001G060300 Sobic001G342200 Sobic001G342200 Sobic004G262300--Sobic001G342200 Sobic001G031900 Sobic001G031900 Sobic004G262300--Sobic001G031900 Sobic004G262300--Sobic010G038700 Sobic009G001900 Sobic009G001900 Sobic004G262300--Sobic009G001900 Sobic004G262300--Sobic004G066800 Sobic002G131600 Sobic002G131600 Sobic004G262300--Sobic002G131600 Sobic007G092100 Sobic007G092100 Sobic004G262300--Sobic007G092100 Sobic001G481700--Sobic001G025600 Sobic001G481700--Sobic004G224900 Sobic010G100000 Sobic010G100000 Sobic001G481700--Sobic010G100000 Sobic002G341800 Sobic002G341800 Sobic001G481700--Sobic002G341800 Sobic001G404100 Sobic001G404100 Sobic001G481700--Sobic001G404100 Sobic007G220900 Sobic007G220900 Sobic001G481700--Sobic007G220900 Sobic009G104100 Sobic009G104100 Sobic001G481700--Sobic009G104100 Sobic001G481700--Sobic001G458700 Sobic001G481700--Sobic007G176200 Sobic010G018400 Sobic010G018400 Sobic008G127500--Sobic010G018400 Sobic010G054200 Sobic010G054200 Sobic008G127500--Sobic010G054200 Sobic001G304400 Sobic001G304400 Sobic008G127500--Sobic001G304400 Sobic007G177200 Sobic007G177200 Sobic008G127500--Sobic007G177200 Sobic010G065400 Sobic010G065400 Sobic008G127500--Sobic010G065400 Sobic003G129800 Sobic003G129800 Sobic008G127500--Sobic003G129800 Sobic003G368500 Sobic003G368500 Sobic008G127500--Sobic003G368500 Sobic008G127500--Sobic001G058900 Sobic001G172000 Sobic001G172000 Sobic008G127500--Sobic001G172000 Sobic002G078400 Sobic002G078400 Sobic009G168000--Sobic002G078400 Sobic009G168000--Sobic007G091000 Sobic009G168000--Sobic010G065400 Sobic006G109700 Sobic006G109700 Sobic009G168000--Sobic006G109700 Sobic009G168000--Sobic008G127500 Sobic003G305100 Sobic003G305100 Sobic009G168000--Sobic003G305100 Sobic009G168000--Sobic010G038700 Sobic009G168000--Sobic001G502200 Sobic003G277000 Sobic003G277000 Sobic009G168000--Sobic003G277000 Sobic004G103700 Sobic004G103700 Sobic001G025600--Sobic004G103700 Sobic001G025600--Sobic001G172000 Sobic001G025600--Sobic001G481700 Sobic001G025600--Sobic003G129800 Sobic001G025600--Sobic001G513500 Sobic003G442400 Sobic003G442400 Sobic001G025600--Sobic003G442400 Sobic001G025600--Sobic004G224900 Sobic001G018800 Sobic001G018800 Sobic001G025600--Sobic001G018800 Sobic003G287300 Sobic003G287300 Sobic001G025600--Sobic003G287300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.