Gene annotation
Transcriptome id Sobic.009G168000.2
Synonym SELT, Sb09g022970
Functional annotation selT-like protein precursor, putative, expressed
UniProt A0A1Z5R2Z7
Pfam PF10262
Panther DB PTHR13544 PTHR13544:SF1
NCBI CDD KOG3286; Selenoprotein T
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G47300 : SELT-like protein precursor
RAP-DB (Rice) LOC_Os05g39110.1 : selT-like protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a037761
Brachypodium KQK05823
Barley HORVU1Hr1G070920.5 , HORVU1Hr1G070920.9 , HORVU1Hr1G070920.8 , HORVU1Hr1G070920.3 , HORVU1Hr1G070920.2 , HORVU1Hr1G070920.1 , HORVU1Hr1G070920.7 , HORVU1Hr1G070920.6 , HORVU1Hr1G070920.4 , HORVU5Hr1G100450.3 , HORVU5Hr1G100450.2 , HORVU5Hr1G100450.1 , HORVU5Hr1G100450.4 , HORVU1Hr1G070920.13 , HORVU1Hr1G070920.12 , HORVU1Hr1G070920.11 , HORVU1Hr1G070920.10 , HORVU1Hr1G070920.16 , HORVU1Hr1G070920.15 , HORVU1Hr1G070920.14
Wheat TraesCS1A02G292300 , TraesCS1B02G301700
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G168000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
2 Sobic.007G091000 thioredoxin domain-containing protein 9, putative, expressed -
3 Sobic.010G065400 X0001, putative, expressed -
4 Sobic.006G109700 UBA and UBX domain-containing protein, putative, expressed K14012: SHP1, UBX1, UBX domain-containing protein 1
5 Sobic.008G127500 expressed protein -
6 Sobic.003G305100 expressed protein -
7 Sobic.010G038700 expressed protein -
8 Sobic.001G502200 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
9 Sobic.003G277000 expressed protein -
10 Sobic.006G211800 coatomer subunit epsilon, putative, expressed K17268: coatomer subunit epsilon
11 Sobic.001G025600 huntingtin-interacting protein HYPK, putative, expressed -
12 Sobic.006G231500 acetyltransferase, GNAT family, putative, expressed K00670: NAA30, N-alpha-acetyltransferase 30
13 Sobic.005G191600 OsSigP7 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K09647: mitochondrial inner membrane protease subunit 1
14 Sobic.003G330500 peptidase, T1 family, putative, expressed -
15 Sobic.008G137600 RNA recognition motif containing protein, expressed K12900: FUS-interacting serine-arginine-rich protein 1
16 Sobic.005G105500 expressed protein -
17 Sobic.008G132800 expressed protein -
18 Sobic.009G045800 bifunctional protein folD, putative, expressed -
19 Sobic.001G538600 rhodanese, putative, expressed K18065: Cdc25 family phosphatase
20 Sobic.009G001900 expressed protein -


Gene co-expression network
sample Sobic009G168000 Sobic009G168000 Sobic002G078400 Sobic002G078400 Sobic009G168000--Sobic002G078400 Sobic007G091000 Sobic007G091000 Sobic009G168000--Sobic007G091000 Sobic010G065400 Sobic010G065400 Sobic009G168000--Sobic010G065400 Sobic006G109700 Sobic006G109700 Sobic009G168000--Sobic006G109700 Sobic008G127500 Sobic008G127500 Sobic009G168000--Sobic008G127500 Sobic003G305100 Sobic003G305100 Sobic009G168000--Sobic003G305100 Sobic010G038700 Sobic010G038700 Sobic009G168000--Sobic010G038700 Sobic001G502200 Sobic001G502200 Sobic009G168000--Sobic001G502200 Sobic003G277000 Sobic003G277000 Sobic009G168000--Sobic003G277000 Sobic004G300900 Sobic004G300900 Sobic002G078400--Sobic004G300900 Sobic002G078400--Sobic010G065400 Sobic003G362400 Sobic003G362400 Sobic002G078400--Sobic003G362400 Sobic002G078400--Sobic007G091000 Sobic008G132800 Sobic008G132800 Sobic002G078400--Sobic008G132800 Sobic001G445800 Sobic001G445800 Sobic002G078400--Sobic001G445800 Sobic001G331900 Sobic001G331900 Sobic002G078400--Sobic001G331900 Sobic009G198500 Sobic009G198500 Sobic002G078400--Sobic009G198500 Sobic010G029400 Sobic010G029400 Sobic002G078400--Sobic010G029400 Sobic007G091000--Sobic002G078400 Sobic007G091000--Sobic003G362400 Sobic001G128400 Sobic001G128400 Sobic007G091000--Sobic001G128400 Sobic005G111100 Sobic005G111100 Sobic007G091000--Sobic005G111100 Sobic007G152400 Sobic007G152400 Sobic007G091000--Sobic007G152400 Sobic007G091000--Sobic003G305100 Sobic003G368500 Sobic003G368500 Sobic007G091000--Sobic003G368500 Sobic001G025600 Sobic001G025600 Sobic007G091000--Sobic001G025600 Sobic007G091000--Sobic003G277000 Sobic010G065400--Sobic002G078400 Sobic010G065400--Sobic008G127500 Sobic010G065400--Sobic008G132800 Sobic010G065400--Sobic001G502200 Sobic001G315500 Sobic001G315500 Sobic010G065400--Sobic001G315500 Sobic004G196300 Sobic004G196300 Sobic010G065400--Sobic004G196300 Sobic010G065400--Sobic003G362400 Sobic010G065400--Sobic005G111100 Sobic010G065400--Sobic009G198500 Sobic008G137600 Sobic008G137600 Sobic006G109700--Sobic008G137600 Sobic001G444300 Sobic001G444300 Sobic006G109700--Sobic001G444300 Sobic006G183000 Sobic006G183000 Sobic006G109700--Sobic006G183000 Sobic001G294900 Sobic001G294900 Sobic006G109700--Sobic001G294900 Sobic006G109700--Sobic009G168000 Sobic006G211800 Sobic006G211800 Sobic006G109700--Sobic006G211800 Sobic006G231500 Sobic006G231500 Sobic006G109700--Sobic006G231500 Sobic004G348900 Sobic004G348900 Sobic006G109700--Sobic004G348900 Sobic006G109700--Sobic001G502200 Sobic010G018400 Sobic010G018400 Sobic008G127500--Sobic010G018400 Sobic010G054200 Sobic010G054200 Sobic008G127500--Sobic010G054200 Sobic001G304400 Sobic001G304400 Sobic008G127500--Sobic001G304400 Sobic007G177200 Sobic007G177200 Sobic008G127500--Sobic007G177200 Sobic008G127500--Sobic010G065400 Sobic003G129800 Sobic003G129800 Sobic008G127500--Sobic003G129800 Sobic008G127500--Sobic003G368500 Sobic001G058900 Sobic001G058900 Sobic008G127500--Sobic001G058900 Sobic001G172000 Sobic001G172000 Sobic008G127500--Sobic001G172000 Sobic003G305100--Sobic003G277000 Sobic003G305100--Sobic006G231500 Sobic003G305100--Sobic007G091000 Sobic009G062000 Sobic009G062000 Sobic003G305100--Sobic009G062000 Sobic002G296200 Sobic002G296200 Sobic003G305100--Sobic002G296200 Sobic001G095632 Sobic001G095632 Sobic003G305100--Sobic001G095632 Sobic002G260200 Sobic002G260200 Sobic003G305100--Sobic002G260200 Sobic009G024500 Sobic009G024500 Sobic003G305100--Sobic009G024500 Sobic001G538600 Sobic001G538600 Sobic003G305100--Sobic001G538600 Sobic001G096100 Sobic001G096100 Sobic010G038700--Sobic001G096100 Sobic009G045800 Sobic009G045800 Sobic010G038700--Sobic009G045800 Sobic001G018200 Sobic001G018200 Sobic010G038700--Sobic001G018200 Sobic003G330500 Sobic003G330500 Sobic010G038700--Sobic003G330500 Sobic004G262300 Sobic004G262300 Sobic010G038700--Sobic004G262300 Sobic001G481700 Sobic001G481700 Sobic010G038700--Sobic001G481700 Sobic010G038700--Sobic008G127500 Sobic010G038700--Sobic009G168000 Sobic010G038700--Sobic001G025600 Sobic001G502200--Sobic001G315500 Sobic007G168600 Sobic007G168600 Sobic001G502200--Sobic007G168600 Sobic004G224900 Sobic004G224900 Sobic001G502200--Sobic004G224900 Sobic003G124800 Sobic003G124800 Sobic001G502200--Sobic003G124800 Sobic001G458700 Sobic001G458700 Sobic001G502200--Sobic001G458700 Sobic001G502200--Sobic003G330500 Sobic002G428200 Sobic002G428200 Sobic001G502200--Sobic002G428200 Sobic001G502200--Sobic002G078400 Sobic006G252200 Sobic006G252200 Sobic001G502200--Sobic006G252200 Sobic003G277000--Sobic003G305100 Sobic003G277000--Sobic007G091000 Sobic003G277000--Sobic002G078400 Sobic003G277000--Sobic001G538600 Sobic009G131100 Sobic009G131100 Sobic003G277000--Sobic009G131100 Sobic001G533300 Sobic001G533300 Sobic003G277000--Sobic001G533300 Sobic002G222900 Sobic002G222900 Sobic003G277000--Sobic002G222900 Sobic001G286300 Sobic001G286300 Sobic003G277000--Sobic001G286300 Sobic003G277000--Sobic009G168000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.